RNA–Protein interactions for RNA: YIL126W

STH1, Transcript of ATPase component of the RSC chromatin remodeling complex, yeast

Gene STH1, Length 4,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STH1	YIL126W	NMD3	P38861	518 aa	Known RBP	2.42	□□□□□ -2.02
STH1	YIL126W	BUD16	P39988	312 aa		2.42	□□□□□ -2.02
STH1	YIL126W	JHD1	P40034	492 aa		2.42	□□□□□ -2.02
STH1	YIL126W	VID30	P53076	958 aa		2.42	□□□□□ -2.02
STH1	YIL126W	YNL050C	P53952	270 aa		2.42	□□□□□ -2.02
STH1	YIL126W	CSM3	Q04659	317 aa		2.42	□□□□□ -2.02
STH1	YIL126W	RAD59	Q12223	238 aa		2.42	□□□□□ -2.02
STH1	YIL126W	RAD50	P12753	1312 aa		2.42	□□□□□ -2.02
STH1	YIL126W	FUB1	P25659	250 aa		2.42	□□□□□ -2.02
STH1	YIL126W	SWC3	P31376	625 aa		2.42	□□□□□ -2.02
STH1	YIL126W	DPH5	P32469	300 aa	Predicted RBP	2.42	□□□□□ -2.02
STH1	YIL126W	SKG6	P32900	734 aa	Predicted RBP	2.42	□□□□□ -2.02
STH1	YIL126W	IXR1	P33417	597 aa		2.42	□□□□□ -2.02
STH1	YIL126W	RDH54	P38086	958 aa		2.42	□□□□□ -2.02
STH1	YIL126W	ETP1	P38748	585 aa	Known RBP	2.42	□□□□□ -2.02
STH1	YIL126W	ERC1	P38767	581 aa		2.42	□□□□□ -2.02
STH1	YIL126W	SSZ1	P38788	538 aa	Known RBP	2.42	□□□□□ -2.02
STH1	YIL126W	VMA13	P41807	478 aa	Known RBP	2.42	□□□□□ -2.02
STH1	YIL126W	TAF1	P46677	1066 aa		2.42	□□□□□ -2.02
STH1	YIL126W	MRK1	P50873	501 aa		2.42	□□□□□ -2.02
STH1	YIL126W	GGA1	Q06336	557 aa		2.42	□□□□□ -2.02
STH1	YIL126W	NDL1	Q06568	189 aa		2.42	□□□□□ -2.02
STH1	YIL126W	TLG2	Q08144	397 aa		2.42	□□□□□ -2.02
STH1	YIL126W	MSC6	Q08818	692 aa	Known RBP	2.42	□□□□□ -2.02
STH1	YIL126W	YOR389W	Q08912	624 aa		2.42	□□□□□ -2.02
STH1	YIL126W	NFI1	Q12216	726 aa		2.42	□□□□□ -2.02
STH1	YIL126W	SLP1	Q12232	587 aa		2.42	□□□□□ -2.02
STH1	YIL126W	SEC39	Q12745	709 aa		2.42	□□□□□ -2.02
STH1	YIL126W	TY4A-H	Q6Q5P6	413 aa		2.42	□□□□□ -2.02
STH1	YIL126W	SSK22	P25390	1331 aa	Predicted RBP	2.42	□□□□□ -2.02
STH1	YIL126W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	2.42	□□□□□ -2.02	not detected
STH1	YIL126W	FIR1	P40020	876 aa		2.42	□□□□□ -2.02
STH1	YIL126W	YRB1	P41920	201 aa	Known RBP	2.42	□□□□□ -2.02
STH1	YIL126W	DAN4	P47179	1161 aa		2.42	□□□□□ -2.02
STH1	YIL126W	SHE4	P51534	789 aa		2.42	□□□□□ -2.02
STH1	YIL126W	BIO5	P53744	561 aa	Known RBP	2.42	□□□□□ -2.02
STH1	YIL126W	NCR1	Q12200	1170 aa		2.42	□□□□□ -2.02
STH1	YIL126W	ARP7	Q12406	477 aa		2.42	□□□□□ -2.02
STH1	YIL126W	FAR1	P21268	830 aa		2.41	□□□□□ -2.02
STH1	YIL126W	STE11	P23561	717 aa		2.41	□□□□□ -2.02
STH1	YIL126W	CDC48	P25694	835 aa	Known RBP	2.41	□□□□□ -2.02
STH1	YIL126W	EFB1	P32471	206 aa	Known RBP	2.41	□□□□□ -2.02
STH1	YIL126W	NPL6	P32832	435 aa		2.41	□□□□□ -2.02
STH1	YIL126W	MRPL7	P36519	292 aa		2.41	□□□□□ -2.02
STH1	YIL126W	RKM3	P38222	552 aa		2.41	□□□□□ -2.02
STH1	YIL126W	YDL144C	Q07589	356 aa		2.41	□□□□□ -2.02
STH1	YIL126W	MSD1	P15179	658 aa	Known RBP	2.41	□□□□□ -2.02
STH1	YIL126W	BRE2	P43132	505 aa		2.41	□□□□□ -2.02
STH1	YIL126W	HOS2	P53096	452 aa	Predicted RBP	2.41	□□□□□ -2.02
STH1	YIL126W	PXR1	P53335	271 aa	Predicted RBP	2.41	□□□□□ -2.02
STH1	YIL126W	BNI4	P53858	892 aa		2.41	□□□□□ -2.02
STH1	YIL126W	RCM1	P53972	490 aa		2.41	□□□□□ -2.02
STH1	YIL126W	MDM1	Q01846	1127 aa		2.41	□□□□□ -2.02
STH1	YIL126W	FOX2	Q02207	900 aa	Known RBP	2.41	□□□□□ -2.02
STH1	YIL126W	GDE1	Q02979	1223 aa		2.41	□□□□□ -2.02
STH1	YIL126W	YMR102C	Q03177	834 aa		2.41	□□□□□ -2.02
STH1	YIL126W	CTI6	Q08923	506 aa		2.41	□□□□□ -2.02
STH1	YIL126W	OSW2	Q12202	724 aa		2.41	□□□□□ -2.02
STH1	YIL126W	YIL002W-A	Q3E7Z5	69 aa		2.41	□□□□□ -2.02
STH1	YIL126W	PMA1	P05030	918 aa	Known RBP	2.41	□□□□□ -2.02
STH1	YIL126W	POL3	P15436	1097 aa		2.41	□□□□□ -2.02
STH1	YIL126W	SRP54	P20424	541 aa	Known RBP	2.41	□□□□□ -2.02
STH1	YIL126W	VPS3	P23643	1011 aa		2.41	□□□□□ -2.02
STH1	YIL126W	RPC19	P28000	142 aa	Known RBP	2.41	□□□□□ -2.02
STH1	YIL126W	YME2	P32843	850 aa		2.41	□□□□□ -2.02
STH1	YIL126W	UBP14	P38237	781 aa	Known RBP	2.41	□□□□□ -2.02
STH1	YIL126W	VPS41	P38959	992 aa		2.41	□□□□□ -2.02
STH1	YIL126W	SUM1	P46676	1062 aa		2.41	□□□□□ -2.02
STH1	YIL126W	IST1	P53843	298 aa	Predicted RBP	2.41	□□□□□ -2.02
STH1	YIL126W	CWC21	Q03375	135 aa	Known RBP	2.41	□□□□□ -2.02
STH1	YIL126W	PUF6	Q04373	656 aa	Known RBP	2.41	□□□□□ -2.02
STH1	YIL126W	TMA64	Q04600	565 aa	Known RBP	2.41	□□□□□ -2.02
STH1	YIL126W	ERB1	Q04660	807 aa	Known RBP	2.41	□□□□□ -2.02
STH1	YIL126W	LCB5	Q06147	687 aa	Known RBP	2.41	□□□□□ -2.02
STH1	YIL126W	CYC8	P14922	966 aa		2.4	□□□□□ -2.02
STH1	YIL126W	DIT2	P21595	489 aa		2.4	□□□□□ -2.02
STH1	YIL126W	ICL1	P28240	557 aa	Predicted RBP	2.4	□□□□□ -2.02
STH1	YIL126W	MCM2	P29469	868 aa		2.4	□□□□□ -2.02
STH1	YIL126W	MCM4	P30665	933 aa	Known RBP	2.4	□□□□□ -2.02
STH1	YIL126W	SRP40	P32583	406 aa	Predicted RBP	2.4	□□□□□ -2.02
STH1	YIL126W	SEG2	P34250	1132 aa		2.4	□□□□□ -2.02
STH1	YIL126W	RPC37	P36121	282 aa		2.4	□□□□□ -2.02
STH1	YIL126W	ERT1	P38140	529 aa		2.4	□□□□□ -2.02
STH1	YIL126W	HXT13	P39924	564 aa		2.4	□□□□□ -2.02
STH1	YIL126W	PTI1	P39927	425 aa	Predicted RBP	2.4	□□□□□ -2.02
STH1	YIL126W	RIO2	P40160	425 aa	Known RBP	2.4	□□□□□ -2.02
STH1	YIL126W	YIL089W	P40500	205 aa		2.4	□□□□□ -2.02
STH1	YIL126W	HUL4	P40985	892 aa		2.4	□□□□□ -2.02
STH1	YIL126W	YDL073W	Q07454	984 aa		2.4	□□□□□ -2.02
STH1	YIL126W	SMC6	Q12749	1114 aa		2.4	□□□□□ -2.02
STH1	YIL126W	COX6	P00427	148 aa		2.4	□□□□□ -2.03
STH1	YIL126W	RAD3	P06839	778 aa		2.4	□□□□□ -2.03
STH1	YIL126W	POL4	P25615	582 aa		2.4	□□□□□ -2.03
STH1	YIL126W	BYE1	P36106	594 aa		2.4	□□□□□ -2.03
STH1	YIL126W	DTR1	P38125	572 aa		2.4	□□□□□ -2.03
STH1	YIL126W	YBL028C	P38202	106 aa		2.4	□□□□□ -2.03
STH1	YIL126W	CST26	P38226	397 aa		2.4	□□□□□ -2.03
STH1	YIL126W	GLO3	P38682	493 aa	Known RBP	2.4	□□□□□ -2.03
STH1	YIL126W	OCA5	P38738	679 aa		2.4	□□□□□ -2.03
STH1	YIL126W	NPR3	P38742	1146 aa		2.4	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms