RNA–Protein interactions for RNA: YGL244W

RTF1, Transcript of Subunit of RNAPII-associated chromatin remodeling Paf1 complex, yeastyeast

Gene RTF1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTF1YGL244W CCM1P48237 864 aaPredicted RBP12.48□□□□□ -0.41
RTF1YGL244W SDA1P53313 767 aaKnown RBP12.48□□□□□ -0.41
RTF1YGL244W RPT6Q01939 405 aaKnown RBP12.48□□□□□ -0.41
RTF1YGL244W RAD61Q99359 647 aa12.48□□□□□ -0.41
RTF1YGL244W MAK11P20484 414 aaKnown RBP12.47□□□□□ -0.41
RTF1YGL244W PRE10P21242 288 aaKnown RBP RIP-Chip data12.47□□□□□ -0.41not detected
RTF1YGL244W PRO3P32263 286 aaKnown RBP12.47□□□□□ -0.41
RTF1YGL244W MDL2P33311 773 aa12.47□□□□□ -0.41
RTF1YGL244W YSW1P38280 609 aa12.47□□□□□ -0.41
RTF1YGL244W YDR338CQ05497 695 aa12.47□□□□□ -0.41
RTF1YGL244W YPL216WQ08964 1102 aa12.47□□□□□ -0.41
RTF1YGL244W LAS1P36146 502 aaPredicted RBP12.46□□□□□ -0.41
RTF1YGL244W OLA1P38219 394 aaKnown RBP12.46□□□□□ -0.41
RTF1YGL244W VID27P40157 782 aa12.46□□□□□ -0.41
RTF1YGL244W DIB1Q06819 143 aaPredicted RBP12.46□□□□□ -0.41
RTF1YGL244W SLK19Q08581 821 aaKnown RBP12.46□□□□□ -0.41
RTF1YGL244W ARD1P07347 238 aaPredicted RBP12.45□□□□□ -0.42
RTF1YGL244W GFA1P14742 717 aaKnown RBP12.45□□□□□ -0.42
RTF1YGL244W RPC53P25441 422 aa12.45□□□□□ -0.42
RTF1YGL244W SEC8P32855 1065 aa12.45□□□□□ -0.42
RTF1YGL244W SPL2P38839 148 aa12.45□□□□□ -0.42
RTF1YGL244W RET3P53600 189 aa12.45□□□□□ -0.42
RTF1YGL244W SYF1Q04048 859 aaPredicted RBP12.45□□□□□ -0.42
RTF1YGL244W URH1Q04179 340 aa12.45□□□□□ -0.42
RTF1YGL244W GCG1P32656 232 aaKnown RBP12.45□□□□□ -0.42
RTF1YGL244W RIM101P33400 625 aa12.45□□□□□ -0.42
RTF1YGL244W SPP381P38282 291 aaPredicted RBP12.45□□□□□ -0.42
RTF1YGL244W PIP2P52960 996 aa12.45□□□□□ -0.42
RTF1YGL244W IRC4Q03036 179 aa12.45□□□□□ -0.42
RTF1YGL244W SMD2Q06217 110 aaKnown RBP12.45□□□□□ -0.42
RTF1YGL244W APL5Q08951 932 aaKnown RBP12.45□□□□□ -0.42
RTF1YGL244W PET10P36139 283 aa12.44□□□□□ -0.42
RTF1YGL244W SIP3P38717 1229 aa12.44□□□□□ -0.42
RTF1YGL244W TOM71P38825 639 aaKnown RBP12.44□□□□□ -0.42
RTF1YGL244W BTN2P53286 410 aa12.44□□□□□ -0.42
RTF1YGL244W RPT4P53549 437 aaKnown RBP12.44□□□□□ -0.42
RTF1YGL244W YPL260WQ08977 551 aa12.44□□□□□ -0.42
RTF1YGL244W MIP1P15801 1254 aa12.43□□□□□ -0.42
RTF1YGL244W YFH7P43591 353 aa12.43□□□□□ -0.42
RTF1YGL244W YAH1Q12184 172 aaKnown RBP12.43□□□□□ -0.42
RTF1YGL244W FIG2P25653 1609 aa12.43□□□□□ -0.42
RTF1YGL244W SSB1P11484 613 aaKnown RBP12.42□□□□□ -0.42
RTF1YGL244W TUP1P16649 713 aa12.42□□□□□ -0.42
RTF1YGL244W LCB1P25045 558 aaKnown RBP12.42□□□□□ -0.42
RTF1YGL244W KIC1P38692 1080 aa12.42□□□□□ -0.42
RTF1YGL244W SET5P38890 526 aaKnown RBP12.42□□□□□ -0.42
RTF1YGL244W SSB2P40150 613 aaKnown RBP12.42□□□□□ -0.42
RTF1YGL244W PRP3Q03338 469 aaPredicted RBP12.42□□□□□ -0.42
RTF1YGL244W JIP3O13555 125 aa12.42□□□□□ -0.42
RTF1YGL244W RPL8BP29453 256 aaKnown RBP12.42□□□□□ -0.42
RTF1YGL244W SAS3P34218 831 aa12.42□□□□□ -0.42
RTF1YGL244W ISW1P38144 1129 aa12.42□□□□□ -0.42
RTF1YGL244W CCT3P39077 534 aaKnown RBP12.42□□□□□ -0.42
RTF1YGL244W MRX1P40050 688 aa12.42□□□□□ -0.42
RTF1YGL244W SGM1P47166 707 aa12.42□□□□□ -0.42
RTF1YGL244W NUC1P08466 329 aa12.41□□□□□ -0.42
RTF1YGL244W CDC10P25342 322 aaKnown RBP12.41□□□□□ -0.42
RTF1YGL244W CDC60P26637 1090 aaKnown RBP12.41□□□□□ -0.42
RTF1YGL244W UBC6P33296 250 aaPredicted RBP12.41□□□□□ -0.42
RTF1YGL244W ADY4Q05955 493 aa12.41□□□□□ -0.42
RTF1YGL244W SIL1Q08199 421 aa12.41□□□□□ -0.42
RTF1YGL244W DSE3Q08729 430 aa12.41□□□□□ -0.42
RTF1YGL244W PMR1P13586 950 aa12.4□□□□□ -0.42
RTF1YGL244W SIC1P38634 284 aa12.4□□□□□ -0.42
RTF1YGL244W DSE4P53753 1117 aa12.4□□□□□ -0.42
RTF1YGL244W PUS1Q12211 544 aaKnown RBP12.4□□□□□ -0.42
RTF1YGL244W ZRT2Q12436 422 aa12.4□□□□□ -0.42
RTF1YGL244W ARG4P04076 463 aaPredicted RBP12.39□□□□□ -0.43
RTF1YGL244W SRP54P20424 541 aaKnown RBP12.39□□□□□ -0.43
RTF1YGL244W XRS2P33301 854 aa12.39□□□□□ -0.43
RTF1YGL244W RIO2P40160 425 aaKnown RBP12.39□□□□□ -0.43
RTF1YGL244W VPS72Q03388 795 aa12.39□□□□□ -0.43
RTF1YGL244W RIO1Q12196 484 aaKnown RBP12.39□□□□□ -0.43
RTF1YGL244W CKA2P19454 339 aa12.38□□□□□ -0.43
RTF1YGL244W APL1P27351 700 aa12.38□□□□□ -0.43
RTF1YGL244W HEL1P36113 551 aa12.38□□□□□ -0.43
RTF1YGL244W JNM1P36224 373 aa12.38□□□□□ -0.43
RTF1YGL244W ATG32P40458 529 aa12.38□□□□□ -0.43
RTF1YGL244W TOS3P43637 560 aa12.38□□□□□ -0.43
RTF1YGL244W YJR039WP47107 1121 aa12.38□□□□□ -0.43
RTF1YGL244W TAD1P53065 400 aa12.38□□□□□ -0.43
RTF1YGL244W TOF1P53840 1238 aa12.38□□□□□ -0.43
RTF1YGL244W UBX2Q04228 584 aa12.38□□□□□ -0.43
RTF1YGL244W YPR078CQ06813 372 aa12.38□□□□□ -0.43
RTF1YGL244W BDF2Q07442 638 aa12.38□□□□□ -0.43
RTF1YGL244W PSF3Q12146 194 aa12.38□□□□□ -0.43
RTF1YGL244W CLF1Q12309 687 aaPredicted RBP12.38□□□□□ -0.43
RTF1YGL244W SEC39Q12745 709 aa12.38□□□□□ -0.43
RTF1YGL244W SNF3P10870 884 aa12.38□□□□□ -0.43
RTF1YGL244W MAK16P10962 306 aaPredicted RBP12.38□□□□□ -0.43
RTF1YGL244W ISY1P21374 235 aaPredicted RBP12.38□□□□□ -0.43
RTF1YGL244W YJL181WP46987 611 aa12.38□□□□□ -0.43
RTF1YGL244W BNI5P53890 448 aaKnown RBP12.38□□□□□ -0.43
RTF1YGL244W CBK1P53894 756 aa12.38□□□□□ -0.43
RTF1YGL244W CSM3Q04659 317 aa12.38□□□□□ -0.43
RTF1YGL244W ECI1Q05871 280 aa12.38□□□□□ -0.43
RTF1YGL244W MLH2Q07980 695 aa12.38□□□□□ -0.43
RTF1YGL244W TUS1Q06412 1307 aa12.37□□□□□ -0.43
RTF1YGL244W SQT1P35184 431 aa12.37□□□□□ -0.43
RTF1YGL244W CCT2P39076 527 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms