RNA–Protein interactions for RNA: YGL244W

RTF1, Transcript of Subunit of RNAPII-associated chromatin remodeling Paf1 complex, yeastyeast

Gene RTF1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTF1YGL244W SGS1P35187 1447 aa19.06■□□□□ 0.64
RTF1YGL244W SPA2P23201 1466 aaKnown RBP18.73■□□□□ 0.59
RTF1YGL244W SSN2P38931 1420 aa18.53■□□□□ 0.56
RTF1YGL244W INO80P53115 1489 aa18.51■□□□□ 0.55
RTF1YGL244W TCB3Q03640 1545 aaKnown RBP18■□□□□ 0.47
RTF1YGL244W DRS1P32892 752 aaKnown RBP17.99■□□□□ 0.47
RTF1YGL244W TY1B-DR4Q07793 1604 aa17.68■□□□□ 0.42
RTF1YGL244W HSL1P34244 1518 aa17.52■□□□□ 0.4
RTF1YGL244W SPT6P23615 1451 aaKnown RBP17.46■□□□□ 0.39
RTF1YGL244W SKI3P17883 1432 aaKnown RBP17.31■□□□□ 0.36
RTF1YGL244W HIR3P47171 1648 aa17.24■□□□□ 0.35
RTF1YGL244W XRN1P22147 1528 aaKnown RBP17.24■□□□□ 0.35
RTF1YGL244W REV3P14284 1504 aa17.04■□□□□ 0.32
RTF1YGL244W MON2P48563 1636 aaPredicted RBP17.02■□□□□ 0.31
RTF1YGL244W SWR1Q05471 1514 aa17■□□□□ 0.31
RTF1YGL244W THO2P53552 1597 aaKnown RBP16.99■□□□□ 0.31
RTF1YGL244W CHD1P32657 1468 aa16.99■□□□□ 0.31
RTF1YGL244W SIN3P22579 1536 aa16.97■□□□□ 0.31
RTF1YGL244W MMS22Q06164 1454 aa16.94■□□□□ 0.3
RTF1YGL244W SSK2P53599 1579 aa16.9■□□□□ 0.3
RTF1YGL244W TAF2P23255 1407 aa16.82■□□□□ 0.28
RTF1YGL244W MYO2P19524 1574 aaKnown RBP16.73■□□□□ 0.27
RTF1YGL244W ESP1Q03018 1630 aa16.7■□□□□ 0.26
RTF1YGL244W POL1P13382 1468 aa16.61■□□□□ 0.25
RTF1YGL244W STU1P38198 1513 aa16.61■□□□□ 0.25
RTF1YGL244W YTA7P40340 1379 aa16.57■□□□□ 0.24
RTF1YGL244W SAS10Q12136 610 aaPredicted RBP16.46■□□□□ 0.23
RTF1YGL244W YPK9Q12697 1472 aa16.45■□□□□ 0.22
RTF1YGL244W BUD4P47136 1447 aa16.45■□□□□ 0.22
RTF1YGL244W UFD4P33202 1483 aa16.44■□□□□ 0.22
RTF1YGL244W BPT1P14772 1559 aa16.42■□□□□ 0.22
RTF1YGL244W ATG2P53855 1592 aa16.39■□□□□ 0.21
RTF1YGL244W TRM732Q03496 1420 aa16.36■□□□□ 0.21
RTF1YGL244W RSE1Q04693 1361 aaKnown RBP16.35■□□□□ 0.21
RTF1YGL244W ECM5Q03214 1411 aa16.35■□□□□ 0.21
RTF1YGL244W YOR1P53049 1477 aa16.31■□□□□ 0.2
RTF1YGL244W DNA2P38859 1522 aa16.31■□□□□ 0.2
RTF1YGL244W RKR1Q04781 1562 aa16.3■□□□□ 0.2
RTF1YGL244W MYO4P32492 1471 aa16.3■□□□□ 0.2
RTF1YGL244W IKI3Q06706 1349 aaKnown RBP16.29■□□□□ 0.2
RTF1YGL244W SCC2Q04002 1493 aa16.28■□□□□ 0.2
RTF1YGL244W KOG1P38873 1557 aa16.26■□□□□ 0.19
RTF1YGL244W TAF7Q05021 590 aa16.18■□□□□ 0.18
RTF1YGL244W RPO31P04051 1460 aa16.16■□□□□ 0.18
RTF1YGL244W SMC4Q12267 1418 aa16.15■□□□□ 0.18
RTF1YGL244W TOP2P06786 1428 aaKnown RBP16.13■□□□□ 0.17
RTF1YGL244W PEP1P32319 1579 aa16.12■□□□□ 0.17
RTF1YGL244W SPP41P38904 1435 aa16.11■□□□□ 0.17
RTF1YGL244W SNQ2P32568 1501 aaKnown RBP16.09■□□□□ 0.17
RTF1YGL244W STH1P32597 1359 aa16.08■□□□□ 0.16
RTF1YGL244W NSR1P27476 414 aaKnown RBP RIP-Chip data16.07■□□□□ 0.16not detected
RTF1YGL244W NUP170P38181 1502 aa16.06■□□□□ 0.16
RTF1YGL244W MDS3P53094 1487 aa16.05■□□□□ 0.16
RTF1YGL244W YCF1P39109 1515 aaKnown RBP16.02■□□□□ 0.16
RTF1YGL244W SSM4P40318 1319 aa16.01■□□□□ 0.15
RTF1YGL244W NOP2P40991 618 aaKnown RBP16.01■□□□□ 0.15
RTF1YGL244W MLP2P40457 1679 aa15.93■□□□□ 0.14
RTF1YGL244W PDR15Q04182 1529 aaKnown RBP15.9■□□□□ 0.14
RTF1YGL244W TY2B-LR1P0C2J3 1770 aa15.9■□□□□ 0.14
RTF1YGL244W TY2B-FP0CX63 1770 aa15.9■□□□□ 0.14
RTF1YGL244W TY2B-GR2P0CX64 1770 aa15.9■□□□□ 0.14
RTF1YGL244W TY2B-CP25384 1770 aa15.9■□□□□ 0.14
RTF1YGL244W TY2B-DR2Q03494 1770 aa15.9■□□□□ 0.14
RTF1YGL244W TY1B-DR1Q03855 1755 aa15.9■□□□□ 0.14
RTF1YGL244W TY2B-DR3Q07791 1770 aaKnown RBP15.9■□□□□ 0.14
RTF1YGL244W TY2B-OR1Q12113 1770 aa15.9■□□□□ 0.14
RTF1YGL244W TY2B-DR1Q12472 1770 aa15.9■□□□□ 0.14
RTF1YGL244W TY2B-OR2Q12501 1770 aa15.9■□□□□ 0.14
RTF1YGL244W TY1B-DR3Q99231 1755 aa15.9■□□□□ 0.14
RTF1YGL244W GEA1P47102 1408 aaPredicted RBP15.9■□□□□ 0.14
RTF1YGL244W IFH1P39520 1085 aa15.89■□□□□ 0.13
RTF1YGL244W PAN1P32521 1480 aa15.84■□□□□ 0.13
RTF1YGL244W TSC11P40061 1430 aa15.8■□□□□ 0.12
RTF1YGL244W TY2B-BQ12491 1770 aa15.79■□□□□ 0.12
RTF1YGL244W ULS1Q08562 1619 aa15.77■□□□□ 0.12
RTF1YGL244W POL5P39985 1022 aaKnown RBP15.76■□□□□ 0.11
RTF1YGL244W ENP1P38333 483 aaKnown RBP15.68■□□□□ 0.1
RTF1YGL244W TY3B-GQ99315 1547 aa15.64■□□□□ 0.09
RTF1YGL244W RTT106P40161 455 aa15.64■□□□□ 0.09
RTF1YGL244W TY1B-HO13535 1793 aa15.64■□□□□ 0.09
RTF1YGL244W TY1B-DR5P0C2I2 1755 aa15.64■□□□□ 0.09
RTF1YGL244W TY1B-DR6P0C2I3 1755 aa15.64■□□□□ 0.09
RTF1YGL244W TY1B-LR2P0C2I5 1755 aa15.64■□□□□ 0.09
RTF1YGL244W TY1B-LR3P0C2I6 1755 aaKnown RBP15.64■□□□□ 0.09
RTF1YGL244W TY1B-PR1P0C2I9 1755 aaKnown RBP15.64■□□□□ 0.09
RTF1YGL244W TY1B-PR2P0C2J0 1756 aa15.64■□□□□ 0.09
RTF1YGL244W TY1B-PR3P0C2J1 1755 aaKnown RBP15.64■□□□□ 0.09
RTF1YGL244W TY1B-JR1P47098 1755 aa15.64■□□□□ 0.09
RTF1YGL244W TY1B-ML2Q03434 1755 aaKnown RBP15.64■□□□□ 0.09
RTF1YGL244W TY1B-ER1Q03612 1755 aa15.64■□□□□ 0.09
RTF1YGL244W TY1B-ML1Q04711 1755 aaKnown RBP15.64■□□□□ 0.09
RTF1YGL244W TY1B-GR2Q12269 1755 aa15.64■□□□□ 0.09
RTF1YGL244W TY1B-OLQ12273 1755 aa15.64■□□□□ 0.09
RTF1YGL244W TY1B-PLQ12414 1755 aaKnown RBP15.64■□□□□ 0.09
RTF1YGL244W VTH1P40438 1549 aa15.62■□□□□ 0.09
RTF1YGL244W VTH2P40890 1549 aa15.62■□□□□ 0.09
RTF1YGL244W RQC2Q12532 1038 aaKnown RBP15.59■□□□□ 0.09
RTF1YGL244W VPS15P22219 1454 aa15.58■□□□□ 0.08
RTF1YGL244W TY1B-BRQ12193 1756 aa15.57■□□□□ 0.08
RTF1YGL244W TY1B-GR3Q12316 1755 aa15.57■□□□□ 0.08
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms