RNA–Protein interactions for RNA: YAL048C

GEM1, Transcript of Outer mitochondrial membrane GTPase, subunit of the ERMES complex, yeast

Gene GEM1, Length 1,989 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEM1	YAL048C	YAR028W	P39548	234 aa		4.93	□□□□□ -1.62
GEM1	YAL048C	CNN1	P43618	361 aa		4.93	□□□□□ -1.62
GEM1	YAL048C	PAN1	P32521	1480 aa		4.93	□□□□□ -1.62
GEM1	YAL048C	SCC2	Q04002	1493 aa		4.93	□□□□□ -1.62
GEM1	YAL048C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
GEM1	YAL048C	TOA1	P32773	286 aa		4.93	□□□□□ -1.62
GEM1	YAL048C	MAE1	P36013	669 aa	Known RBP	4.93	□□□□□ -1.62
GEM1	YAL048C	ALG3	P38179	458 aa		4.93	□□□□□ -1.62
GEM1	YAL048C	YHR020W	P38708	688 aa	Known RBP	4.93	□□□□□ -1.62
GEM1	YAL048C	KIP3	P53086	805 aa	Known RBP	4.93	□□□□□ -1.62
GEM1	YAL048C	YGR045C	P53229	120 aa		4.93	□□□□□ -1.62
GEM1	YAL048C	MCM7	P38132	845 aa		4.92	□□□□□ -1.62
GEM1	YAL048C	RRM3	P38766	723 aa		4.92	□□□□□ -1.62
GEM1	YAL048C	SBE2	P42223	864 aa	Known RBP	4.92	□□□□□ -1.62
GEM1	YAL048C	SHE9	Q04172	456 aa		4.92	□□□□□ -1.62
GEM1	YAL048C	PPM2	Q08282	695 aa		4.92	□□□□□ -1.62
GEM1	YAL048C	YOR131C	Q12486	218 aa		4.92	□□□□□ -1.62
GEM1	YAL048C	DRS2	P39524	1355 aa		4.91	□□□□□ -1.62
GEM1	YAL048C	ATG14	P38270	344 aa		4.91	□□□□□ -1.62
GEM1	YAL048C	FPR3	P38911	411 aa	Known RBP	4.91	□□□□□ -1.62
GEM1	YAL048C	PMC1	P38929	1173 aa	Predicted RBP	4.91	□□□□□ -1.62
GEM1	YAL048C	MPH1	P40562	993 aa		4.91	□□□□□ -1.62
GEM1	YAL048C	DSE4	P53753	1117 aa		4.91	□□□□□ -1.62
GEM1	YAL048C	AVO1	Q08236	1176 aa		4.91	□□□□□ -1.62
GEM1	YAL048C	YLL054C	Q12244	843 aa		4.91	□□□□□ -1.62
GEM1	YAL048C	TSR4	P25040	408 aa		4.91	□□□□□ -1.62
GEM1	YAL048C	YKL107W	P34251	309 aa		4.91	□□□□□ -1.62
GEM1	YAL048C	RRP14	P36080	434 aa	Known RBP	4.91	□□□□□ -1.62
GEM1	YAL048C	TPM2	P40414	161 aa		4.91	□□□□□ -1.62
GEM1	YAL048C	YGL176C	P46945	554 aa		4.91	□□□□□ -1.62
GEM1	YAL048C	PFD1	P46988	109 aa		4.91	□□□□□ -1.62
GEM1	YAL048C	ELA1	P53861	379 aa	Predicted RBP	4.91	□□□□□ -1.62
GEM1	YAL048C	BRE1	Q07457	700 aa	Known RBP	4.91	□□□□□ -1.62
GEM1	YAL048C	GAS5	Q08193	484 aa		4.91	□□□□□ -1.62
GEM1	YAL048C	YOR223W	Q12015	292 aa		4.91	□□□□□ -1.62
GEM1	YAL048C	TY1A-NL1	Q12391	440 aa	Known RBP	4.91	□□□□□ -1.62
GEM1	YAL048C	RKM4	Q12504	494 aa		4.91	□□□□□ -1.62
GEM1	YAL048C	PTC5	Q12511	572 aa		4.91	□□□□□ -1.62
GEM1	YAL048C	RPL8B	P29453	256 aa	Known RBP	4.9	□□□□□ -1.63
GEM1	YAL048C	MLS1	P30952	554 aa		4.9	□□□□□ -1.63
GEM1	YAL048C	MRP8	P35719	219 aa		4.9	□□□□□ -1.63
GEM1	YAL048C	BOI2	P39969	1040 aa		4.9	□□□□□ -1.63
GEM1	YAL048C	YNR014W	P53719	212 aa		4.9	□□□□□ -1.63
GEM1	YAL048C	DOT1	Q04089	582 aa	Known RBP	4.9	□□□□□ -1.63
GEM1	YAL048C	FMP25	Q08023	583 aa		4.9	□□□□□ -1.63
GEM1	YAL048C	FLC1	Q08967	793 aa		4.9	□□□□□ -1.63
GEM1	YAL048C	IRC20	Q06554	1556 aa		4.9	□□□□□ -1.63
GEM1	YAL048C	PPG1	P32838	368 aa		4.89	□□□□□ -1.63
GEM1	YAL048C	IRR1	P40541	1150 aa		4.89	□□□□□ -1.63
GEM1	YAL048C	LAP2	Q10740	671 aa		4.89	□□□□□ -1.63
GEM1	YAL048C	HIF1	Q12373	385 aa		4.89	□□□□□ -1.63
GEM1	YAL048C	RGD1	P38339	666 aa		4.89	□□□□□ -1.63
GEM1	YAL048C	MBP1	P39678	833 aa		4.89	□□□□□ -1.63
GEM1	YAL048C	TY4A-J	P47023	414 aa		4.89	□□□□□ -1.63
GEM1	YAL048C	HNT2	P49775	206 aa		4.89	□□□□□ -1.63
GEM1	YAL048C	YGR125W	P53273	1036 aa		4.89	□□□□□ -1.63
GEM1	YAL048C	NCE103	P53615	221 aa		4.89	□□□□□ -1.63
GEM1	YAL048C	ALG12	P53730	551 aa		4.89	□□□□□ -1.63
GEM1	YAL048C	RSA3	Q05942	220 aa	Known RBP	4.89	□□□□□ -1.63
GEM1	YAL048C	SSN2	P38931	1420 aa		4.89	□□□□□ -1.63
GEM1	YAL048C	AI1	P03875	834 aa		4.88	□□□□□ -1.63
GEM1	YAL048C	SSB1	P11484	613 aa	Known RBP	4.88	□□□□□ -1.63
GEM1	YAL048C	TIM23	P32897	222 aa		4.88	□□□□□ -1.63
GEM1	YAL048C	SSB2	P40150	613 aa	Known RBP	4.88	□□□□□ -1.63
GEM1	YAL048C	SPO75	Q07798	868 aa		4.88	□□□□□ -1.63
GEM1	YAL048C	SBP1	P10080	294 aa	Known RBP	4.87	□□□□□ -1.63
GEM1	YAL048C	GAL11	P19659	1081 aa		4.87	□□□□□ -1.63
GEM1	YAL048C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
GEM1	YAL048C	PBY1	P38254	753 aa		4.87	□□□□□ -1.63
GEM1	YAL048C	QNS1	P38795	714 aa	Known RBP	4.87	□□□□□ -1.63
GEM1	YAL048C	RSP5	P39940	809 aa	Known RBP	4.87	□□□□□ -1.63
GEM1	YAL048C	SIP5	P40210	489 aa	Known RBP	4.87	□□□□□ -1.63
GEM1	YAL048C	VPS53	P47061	822 aa		4.87	□□□□□ -1.63
GEM1	YAL048C	OSH2	Q12451	1283 aa		4.87	□□□□□ -1.63
GEM1	YAL048C	GPT2	P36148	743 aa		4.87	□□□□□ -1.63
GEM1	YAL048C	HSE1	P38753	452 aa		4.87	□□□□□ -1.63
GEM1	YAL048C	NUP82	P40368	713 aa		4.87	□□□□□ -1.63
GEM1	YAL048C	YFL066C	P43538	392 aa		4.87	□□□□□ -1.63
GEM1	YAL048C	BUD9	P53226	547 aa		4.87	□□□□□ -1.63
GEM1	YAL048C	CWC22	P53333	577 aa	Known RBP	4.87	□□□□□ -1.63
GEM1	YAL048C	TRM732	Q03496	1420 aa		4.86	□□□□□ -1.63
GEM1	YAL048C	CIT1	P00890	479 aa		4.86	□□□□□ -1.63
GEM1	YAL048C	RET1	P22276	1149 aa	Known RBP	4.86	□□□□□ -1.63
GEM1	YAL048C	NFS1	P25374	497 aa		4.86	□□□□□ -1.63
GEM1	YAL048C	NMD3	P38861	518 aa	Known RBP	4.86	□□□□□ -1.63
GEM1	YAL048C	MSH4	P40965	878 aa	Predicted RBP	4.86	□□□□□ -1.63
GEM1	YAL048C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
GEM1	YAL048C	YLR257W	Q06146	321 aa	Known RBP	4.86	□□□□□ -1.63
GEM1	YAL048C	EAF1	Q06337	982 aa		4.86	□□□□□ -1.63
GEM1	YAL048C	YDL121C	Q07541	149 aa		4.86	□□□□□ -1.63
GEM1	YAL048C	YOL057W	Q08225	711 aa		4.86	□□□□□ -1.63
GEM1	YAL048C	GNT1	Q12096	491 aa		4.86	□□□□□ -1.63
GEM1	YAL048C	YER152C	P10356	443 aa		4.85	□□□□□ -1.63
GEM1	YAL048C	HSP60	P19882	572 aa	Known RBP	4.85	□□□□□ -1.63
GEM1	YAL048C	TRK2	P28584	889 aa		4.85	□□□□□ -1.63
GEM1	YAL048C	KIP1	P28742	1111 aa		4.85	□□□□□ -1.63
GEM1	YAL048C	GPB2	P39717	880 aa		4.85	□□□□□ -1.63
GEM1	YAL048C	AIM21	P40563	679 aa		4.85	□□□□□ -1.63
GEM1	YAL048C	ERP6	P53198	216 aa		4.85	□□□□□ -1.63
GEM1	YAL048C	TDA6	Q06466	467 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms