RNA–Protein interactions for RNA: YAL048C

GEM1, Transcript of Outer mitochondrial membrane GTPase, subunit of the ERMES complex, yeast

Gene GEM1, Length 1,989 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEM1	YAL048C	DRS1	P32892	752 aa	Known RBP	10.96	□□□□□ -0.65
GEM1	YAL048C	MTC1	P47018	478 aa	Known RBP	10.7	□□□□□ -0.7
GEM1	YAL048C	BFR2	Q06631	534 aa	Known RBP	9.57	□□□□□ -0.88
GEM1	YAL048C	DIP2	Q12220	943 aa	Predicted RBP	9.25	□□□□□ -0.93
GEM1	YAL048C	AVT3	P36062	692 aa		9.21	□□□□□ -0.93
GEM1	YAL048C	TFA1	P36100	482 aa		9.15	□□□□□ -0.94
GEM1	YAL048C	RSE1	Q04693	1361 aa	Known RBP	8.66	□□□□□ -1.02
GEM1	YAL048C	ISW2	Q08773	1120 aa		8.62	□□□□□ -1.03
GEM1	YAL048C	RPG1	P38249	964 aa	Known RBP	8.53	□□□□□ -1.04
GEM1	YAL048C	FAP1	P53971	965 aa		8.51	□□□□□ -1.05
GEM1	YAL048C	PRI1	P10363	409 aa		8.46	□□□□□ -1.05
GEM1	YAL048C	RPL17A	P05740	184 aa	Known RBP	8.34	□□□□□ -1.07
GEM1	YAL048C	RPL17B	P46990	184 aa	Known RBP	8.34	□□□□□ -1.07
GEM1	YAL048C	AAD16	Q02895	342 aa		8.28	□□□□□ -1.08
GEM1	YAL048C	REB1	P21538	810 aa		8.19	□□□□□ -1.1
GEM1	YAL048C	SPT21	P35209	758 aa		8.08	□□□□□ -1.12
GEM1	YAL048C	TSR3	Q12094	313 aa	Known RBP	8.07	□□□□□ -1.12
GEM1	YAL048C	RIM101	P33400	625 aa		7.99	□□□□□ -1.13
GEM1	YAL048C	PRY3	P47033	881 aa		7.97	□□□□□ -1.13
GEM1	YAL048C	RQC2	Q12532	1038 aa	Known RBP	7.89	□□□□□ -1.15
GEM1	YAL048C	PTP3	P40048	928 aa		7.86	□□□□□ -1.15
GEM1	YAL048C	OXP1	P28273	1286 aa		7.77	□□□□□ -1.17
GEM1	YAL048C	YKR023W	P36119	530 aa	Known RBP	7.77	□□□□□ -1.17
GEM1	YAL048C	SSP1	P38871	571 aa		7.71	□□□□□ -1.17
GEM1	YAL048C	MRPL32	P25348	183 aa		7.71	□□□□□ -1.18
GEM1	YAL048C	YAH1	Q12184	172 aa	Known RBP	7.67	□□□□□ -1.18
GEM1	YAL048C	DMA1	P38823	416 aa		7.63	□□□□□ -1.19
GEM1	YAL048C	YCK3	P39962	524 aa		7.62	□□□□□ -1.19
GEM1	YAL048C	HO	P09932	586 aa		7.6	□□□□□ -1.19
GEM1	YAL048C	YIL055C	P40523	627 aa	Known RBP	7.6	□□□□□ -1.19
GEM1	YAL048C	TFC8	Q12308	588 aa		7.59	□□□□□ -1.19
GEM1	YAL048C	YLR271W	Q06152	274 aa		7.59	□□□□□ -1.2
GEM1	YAL048C	DCD1	P06773	312 aa		7.56	□□□□□ -1.2
GEM1	YAL048C	CDC27	P38042	758 aa		7.55	□□□□□ -1.2
GEM1	YAL048C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	7.55	□□□□□ -1.2	not detected
GEM1	YAL048C	RSM7	P47150	247 aa		7.51	□□□□□ -1.21
GEM1	YAL048C	HAA1	Q12753	694 aa	Known RBP	7.5	□□□□□ -1.21
GEM1	YAL048C	MGA2	P40578	1113 aa		7.42	□□□□□ -1.22
GEM1	YAL048C	BCH2	P36122	765 aa		7.39	□□□□□ -1.23
GEM1	YAL048C	CST9	Q06032	482 aa		7.38	□□□□□ -1.23
GEM1	YAL048C	AI2	P03876	854 aa		7.37	□□□□□ -1.23
GEM1	YAL048C	PSD2	P53037	1138 aa	Known RBP	7.36	□□□□□ -1.23
GEM1	YAL048C	BBC1	P47068	1157 aa		7.28	□□□□□ -1.24
GEM1	YAL048C	EPS1	P40557	701 aa		7.28	□□□□□ -1.24
GEM1	YAL048C	SCY1	P53009	804 aa		7.22	□□□□□ -1.25
GEM1	YAL048C	BDF1	P35817	686 aa		7.21	□□□□□ -1.26
GEM1	YAL048C	MAP2	P38174	421 aa	Known RBP	7.19	□□□□□ -1.26
GEM1	YAL048C	MRM1	P25270	412 aa		7.17	□□□□□ -1.26
GEM1	YAL048C	UBP10	P53874	792 aa	Predicted RBP	7.17	□□□□□ -1.26
GEM1	YAL048C	SAS10	Q12136	610 aa	Predicted RBP	7.15	□□□□□ -1.27
GEM1	YAL048C	RAM2	P29703	316 aa		7.13	□□□□□ -1.27
GEM1	YAL048C	RCR1	P38212	213 aa		7.13	□□□□□ -1.27
GEM1	YAL048C	YGL015C	P33199	130 aa		7.1	□□□□□ -1.27
GEM1	YAL048C	RTG3	P38165	486 aa		7.05	□□□□□ -1.28
GEM1	YAL048C	SLX5	P32828	619 aa	Known RBP	7.04	□□□□□ -1.28
GEM1	YAL048C	SET1	P38827	1080 aa	Known RBP	7	□□□□□ -1.29
GEM1	YAL048C	VPS29	P38759	282 aa		6.99	□□□□□ -1.29
GEM1	YAL048C	LEU3	P08638	886 aa		6.97	□□□□□ -1.29
GEM1	YAL048C	MAK11	P20484	414 aa	Known RBP	6.97	□□□□□ -1.29
GEM1	YAL048C	LEO1	P38439	464 aa		6.97	□□□□□ -1.29
GEM1	YAL048C	TAF7	Q05021	590 aa		6.97	□□□□□ -1.29
GEM1	YAL048C	YPR148C	Q06523	435 aa		6.93	□□□□□ -1.3
GEM1	YAL048C	VPS70	P47161	811 aa		6.9	□□□□□ -1.3
GEM1	YAL048C	STS1	P38637	319 aa		6.89	□□□□□ -1.31
GEM1	YAL048C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	6.89	□□□□□ -1.31	not detected
GEM1	YAL048C	COQ8	P27697	501 aa		6.89	□□□□□ -1.31
GEM1	YAL048C	IFH1	P39520	1085 aa		6.86	□□□□□ -1.31
GEM1	YAL048C	YFR006W	P43590	535 aa		6.86	□□□□□ -1.31
GEM1	YAL048C	DBP1	P24784	617 aa	Known RBP	6.85	□□□□□ -1.31
GEM1	YAL048C	TIF4632	P39936	914 aa	Known RBP	6.84	□□□□□ -1.31
GEM1	YAL048C	EDS1	P38073	919 aa		6.84	□□□□□ -1.32
GEM1	YAL048C	CKB1	P43639	278 aa		6.84	□□□□□ -1.32
GEM1	YAL048C	YOR238W	Q08634	303 aa		6.83	□□□□□ -1.32
GEM1	YAL048C	MIF2	P35201	549 aa		6.82	□□□□□ -1.32
GEM1	YAL048C	SPB4	P25808	606 aa	Predicted RBP	6.8	□□□□□ -1.32
GEM1	YAL048C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	6.8	□□□□□ -1.32	not detected
GEM1	YAL048C	TGL3	P40308	642 aa		6.8	□□□□□ -1.32
GEM1	YAL048C	PIB1	Q06651	286 aa		6.78	□□□□□ -1.32
GEM1	YAL048C	NOP53	Q12080	455 aa	Known RBP	6.78	□□□□□ -1.32
GEM1	YAL048C	YAP5	P40574	245 aa		6.77	□□□□□ -1.33
GEM1	YAL048C	PBS2	P08018	668 aa		6.74	□□□□□ -1.33
GEM1	YAL048C	PTC3	P34221	468 aa	Known RBP	6.74	□□□□□ -1.33
GEM1	YAL048C	DSF2	P38213	736 aa		6.74	□□□□□ -1.33
GEM1	YAL048C	RPN1	P38764	993 aa	Known RBP	6.74	□□□□□ -1.33
GEM1	YAL048C	VMA1	P17255	1071 aa	Known RBP	6.71	□□□□□ -1.33
GEM1	YAL048C	REF2	P42073	533 aa	Predicted RBP	6.69	□□□□□ -1.34
GEM1	YAL048C	MST1	P07236	462 aa		6.64	□□□□□ -1.35
GEM1	YAL048C	MAM3	Q12296	706 aa		6.64	□□□□□ -1.35
GEM1	YAL048C	IES2	P40154	320 aa		6.63	□□□□□ -1.35
GEM1	YAL048C	SAM3	Q08986	587 aa		6.63	□□□□□ -1.35
GEM1	YAL048C	GRE2	Q12068	342 aa	Known RBP	6.62	□□□□□ -1.35
GEM1	YAL048C	ATH1	P48016	1211 aa		6.62	□□□□□ -1.35
GEM1	YAL048C	YNR021W	P53723	404 aa	Known RBP	6.61	□□□□□ -1.35
GEM1	YAL048C	GUT1	P32190	709 aa		6.6	□□□□□ -1.35
GEM1	YAL048C	VHR2	P40041	505 aa		6.6	□□□□□ -1.35
GEM1	YAL048C	NUP42	P49686	430 aa	Known RBP	6.6	□□□□□ -1.35
GEM1	YAL048C	DMA2	P53924	522 aa		6.59	□□□□□ -1.35
GEM1	YAL048C	MAK21	Q12176	1025 aa	Known RBP	6.59	□□□□□ -1.35
GEM1	YAL048C	COX6	P00427	148 aa		6.58	□□□□□ -1.36
GEM1	YAL048C	DIT2	P21595	489 aa		6.58	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 70.8 ms