RNA–Protein interactions for RNA: ENSMUST00000173243.7

Ccdc28a-203, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-203ENSMUST00000173243 AtrnQ9WU60 1428 aa16.03■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Smarcc1P97496 1104 aa16.03■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Dusp27Q148W8 1138 aa16.03■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 DiexfQ8BTT6 772 aaKnown RBP16.03■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Ubr3Q5U430 1889 aa16.03■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Gm13023A2A8N2 498 aa16.02■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 ErfeQ6PGN1 340 aa16.02■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Slc4a2P13808 1237 aaKnown RBP16■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 Jdp2P97875 163 aa16■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 En2P09066 324 aa15.99■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 Lrrc43Q3V0L5 667 aa15.99■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 NrdcQ8BHG1 1161 aa15.99■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 Miga2Q8BK03 593 aa15.99■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 Prim1P20664 417 aa15.98■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 Iqsec3Q3TES0 1195 aa15.98■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 Foxp4Q9DBY0 795 aaKnown RBP15.98■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 IncenpQ9WU62 880 aa15.98■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 MetP16056 1379 aa15.98■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 Col1a2Q01149 1372 aa15.98■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 Ggnbp2Q5SV77 696 aa15.97■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 Flad1Q8R123 492 aa15.97■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 Prr29B1ARI9 187 aa15.96■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 Eif4a1P60843 406 aaKnown RBP15.96■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 Mak16Q8BGS0 296 aaKnown RBP15.96■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 PigbQ9JJQ0 542 aa15.96■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 TefQ9JLC6 301 aa15.96■□□□□ 0.15
Ccdc28a-203ENSMUST00000173243 Dlg5E9Q9R9 1921 aa15.96■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Magea1O89006 320 aa15.95■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Magea5O89009 320 aa15.95■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Stra8P70278 393 aa15.95■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 PsdQ5DTT2 1024 aa15.95■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 RtcbQ99LF4 505 aaKnown RBP15.95■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Magea2Q9R2A2 320 aa15.95■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Sned1Q70E20 1403 aa15.94■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Gnai1B2RSH2 354 aa15.94■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Anks4bQ8K3X6 423 aa15.94■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Gnai3Q9DC51 354 aa15.94■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Plch1Q4KWH5 1682 aa15.94■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Taf7Q9R1C0 341 aa15.93■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Kcnq2Q9Z351 759 aa15.93■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Col11a2Q64739 1736 aa15.93■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Gm12185Q5NCB2 835 aa15.92■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Ralbp1Q62172 648 aa15.92■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Sumf1Q8R0F3 372 aa15.92■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Mtfr1lQ9CWE0 289 aa15.92■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Syde2E9PUP1 1314 aa15.92■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Cnnm1Q0GA42 951 aa15.91■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Col23a1Q8K4G2 532 aa15.91■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Emilin1Q99K41 1017 aa15.91■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Dpf1Q9QX66 387 aa15.91■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Erbb4Q61527 1308 aa15.91■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 CastP51125 788 aa15.9■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Morc2aQ69ZX6 1030 aa15.9■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Tmem119Q8R138 280 aa15.9■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 HmcesQ8R1M0 353 aaKnown RBP15.9■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Zbtb1Q91VL9 713 aa15.9■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 GckrQ91X44 587 aa15.9■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Pdia6Q922R8 440 aaKnown RBP15.9■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Gigyf1Q99MR1 1044 aaKnown RBP15.9■□□□□ 0.14
Ccdc28a-203ENSMUST00000173243 Atf5O70191 283 aa15.89■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Amhr2Q8K592 568 aa15.89■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Nip7Q9CXK8 180 aaKnown RBP15.89■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Ddx60E9PZQ1 1711 aa15.88■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Prom2Q3UUY6 835 aa15.88■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 PsapQ61207 557 aaKnown RBP15.88■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Cyp2d12Q8BVD2 504 aa15.88■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 CrbnQ8C7D2 445 aa15.88■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 BcorQ8CGN4 1759 aa15.87■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Zswim8Q3UHH1 1832 aaKnown RBP15.87■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Klhdc4Q921I2 584 aa15.87■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Cdc37l1Q9CZP7 335 aa15.87■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Speer4f1Q9D5Q6 258 aa15.87■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Ttc21aQ8C0S4 1314 aa15.87■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Lama4P97927 1816 aa15.87■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Ankrd50F7BE84 1390 aa15.87■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Chpf2Q3UU43 768 aa15.86■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Prkab2Q6PAM0 271 aa15.86■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Msl1Q6PDM1 616 aa15.86■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Rapgef4Q9EQZ6 1011 aa15.86■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Clcn1Q64347 994 aa15.85■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 U2surpQ6NV83 1029 aaKnown RBP15.85■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Usp16Q99LG0 825 aa15.85■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Atxn3Q9CVD2 355 aa15.85■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Prr5lA2AVJ5 370 aa15.84■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Atp1b3P97370 278 aa15.84■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Q3TQI7 289 aaKnown RBP15.84■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Rbm26Q6NZN0 1012 aaKnown RBP15.84■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Plekhh1Q80TI1 1356 aa15.84■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Col4a1P02463 1669 aa15.83■□□□□ 0.13
Ccdc28a-203ENSMUST00000173243 Trim52Q8CDV4 233 aa15.83■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Chrna2Q91X60 512 aa15.83■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Irx6Q9ER75 438 aa15.83■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Ubn2Q80WC1 1314 aa15.83■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Lrp5Q91VN0 1614 aa15.83■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Pibf1E9Q6K3 756 aa15.82■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 NudcO35685 332 aaKnown RBP15.82■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Fkbp4P30416 458 aa15.82■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 SympkQ80X82 1284 aa15.82■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Znrd1-asQ8R0E5 213 aa15.82■□□□□ 0.12
Ccdc28a-203ENSMUST00000173243 Sipa1l3G3X9J0 1776 aa15.82■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms