RNA–Protein interactions for RNA: ENSMUST00000173243.7

Ccdc28a-203, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-203ENSMUST00000173243 Gm35339A0A140LHH9 1649 aa27.9■■■□□ 2.06
Ccdc28a-203ENSMUST00000173243 NischQ80TM9 1593 aa27.46■■□□□ 1.99
Ccdc28a-203ENSMUST00000173243 Abcc9P70170 1546 aa26.61■■□□□ 1.85
Ccdc28a-203ENSMUST00000173243 Abcc8B2RUS7 1588 aa26.54■■□□□ 1.84
Ccdc28a-203ENSMUST00000173243 ScribQ80U72 1612 aa25.53■■□□□ 1.68
Ccdc28a-203ENSMUST00000173243 NacadQ5SWP3 1504 aa24.78■■□□□ 1.56
Ccdc28a-203ENSMUST00000173243 Kdm5dQ62240 1548 aa24.7■■□□□ 1.54
Ccdc28a-203ENSMUST00000173243 Dcaf1Q80TR8 1506 aa24.56■■□□□ 1.52
Ccdc28a-203ENSMUST00000173243 Sycp2Q9CUU3 1500 aa24.28■■□□□ 1.48
Ccdc28a-203ENSMUST00000173243 Rb1cc1Q9ESK9 1588 aa23.92■■□□□ 1.42
Ccdc28a-203ENSMUST00000173243 BicraF8VPZ9 1578 aa23.91■■□□□ 1.42
Ccdc28a-203ENSMUST00000173243 Ccdc180J3QNE4 1664 aa23.78■■□□□ 1.4
Ccdc28a-203ENSMUST00000173243 Crybg2B7ZCC2 1516 aa23.65■■□□□ 1.38
Ccdc28a-203ENSMUST00000173243 Baz1aO88379 1555 aa23.64■■□□□ 1.37
Ccdc28a-203ENSMUST00000173243 Rhox8Q6VSS7 320 aa23.61■■□□□ 1.37
Ccdc28a-203ENSMUST00000173243 Pds5bQ4VA53 1446 aaKnown RBP23.26■■□□□ 1.31
Ccdc28a-203ENSMUST00000173243 Zcchc6Q5BLK4 1491 aaKnown RBP23.16■■□□□ 1.3
Ccdc28a-203ENSMUST00000173243 Atad2bE9Q166 1460 aaKnown RBP23.05■■□□□ 1.28
Ccdc28a-203ENSMUST00000173243 Thoc2B1AZI6 1594 aaKnown RBP23.03■■□□□ 1.28
Ccdc28a-203ENSMUST00000173243 Dnajc5bQ9CQ94 199 aa22.98■■□□□ 1.27
Ccdc28a-203ENSMUST00000173243 Smarca2Q6DIC0 1577 aa22.95■■□□□ 1.26
Ccdc28a-203ENSMUST00000173243 Smarca4Q3TKT4 1613 aaKnown RBP22.88■■□□□ 1.25
Ccdc28a-203ENSMUST00000173243 Cecr2E9Q2Z1 1453 aa22.76■■□□□ 1.23
Ccdc28a-203ENSMUST00000173243 Ercc6F8VPZ5 1481 aa22.73■■□□□ 1.23
Ccdc28a-203ENSMUST00000173243 Iqgap2Q3UQ44 1575 aa22.72■■□□□ 1.23
Ccdc28a-203ENSMUST00000173243 Rtl1Q7M732 1744 aa22.68■■□□□ 1.22
Ccdc28a-203ENSMUST00000173243 Cc2d2aQ8CFW7 1633 aa22.6■■□□□ 1.21
Ccdc28a-203ENSMUST00000173243 Wdr62Q3U3T8 1523 aa22.54■■□□□ 1.2
Ccdc28a-203ENSMUST00000173243 Fam135aQ6NS59 1506 aa22.54■■□□□ 1.2
Ccdc28a-203ENSMUST00000173243 Frmpd1A2AKB4 1549 aa22.48■■□□□ 1.19
Ccdc28a-203ENSMUST00000173243 Baz1bQ9Z277 1479 aa22.44■■□□□ 1.18
Ccdc28a-203ENSMUST00000173243 Phldb1Q6PDH0 1371 aaKnown RBP22.37■■□□□ 1.17
Ccdc28a-203ENSMUST00000173243 Cttnbp2B9EJA2 1648 aa22.32■■□□□ 1.16
Ccdc28a-203ENSMUST00000173243 CftrP26361 1476 aa22.32■■□□□ 1.16
Ccdc28a-203ENSMUST00000173243 Brd4Q9ESU6 1400 aaKnown RBP22.3■■□□□ 1.16
Ccdc28a-203ENSMUST00000173243 Synj1Q8CHC4 1574 aa22.24■■□□□ 1.15
Ccdc28a-203ENSMUST00000173243 Unc13aQ4KUS2 1712 aa22.19■■□□□ 1.14
Ccdc28a-203ENSMUST00000173243 Ccdc136Q3TVA9 1136 aa22.07■■□□□ 1.12
Ccdc28a-203ENSMUST00000173243 Ubl4bQ9CQ84 188 aa22.06■■□□□ 1.12
Ccdc28a-203ENSMUST00000173243 Mrc2Q64449 1479 aa21.97■■□□□ 1.11
Ccdc28a-203ENSMUST00000173243 Trim41Q5NCC3 630 aa21.9■■□□□ 1.1
Ccdc28a-203ENSMUST00000173243 Esf1Q3V1V3 845 aaKnown RBP21.8■■□□□ 1.08
Ccdc28a-203ENSMUST00000173243 Rsf1E9PWW9 1441 aaKnown RBP21.75■■□□□ 1.07
Ccdc28a-203ENSMUST00000173243 Lamc3Q9R0B6 1581 aa21.69■■□□□ 1.06
Ccdc28a-203ENSMUST00000173243 Kif15Q6P9L6 1387 aa21.65■■□□□ 1.06
Ccdc28a-203ENSMUST00000173243 Cux2P70298 1426 aa21.64■■□□□ 1.06
Ccdc28a-203ENSMUST00000173243 Top2bQ64511 1612 aa21.53■■□□□ 1.04
Ccdc28a-203ENSMUST00000173243 Golga3P55937 1487 aa21.52■■□□□ 1.04
Ccdc28a-203ENSMUST00000173243 TnnQ80Z71 1560 aa21.48■■□□□ 1.03
Ccdc28a-203ENSMUST00000173243 Lrriq1Q0P5X1 1673 aa21.47■■□□□ 1.03
Ccdc28a-203ENSMUST00000173243 Kif21aQ9QXL2 1672 aa21.47■■□□□ 1.03
Ccdc28a-203ENSMUST00000173243 Cep164Q5DU05 1446 aa21.39■■□□□ 1.02
Ccdc28a-203ENSMUST00000173243 Npm1Q61937 292 aaKnown RBP21.39■■□□□ 1.01
Ccdc28a-203ENSMUST00000173243 Ccdc18Q640L5 1455 aa21.33■■□□□ 1.01
Ccdc28a-203ENSMUST00000173243 Fmn1Q05860 1466 aa21.29■■□□□ 1
Ccdc28a-203ENSMUST00000173243 Camsap1A2AHC3 1581 aa21.27■■□□□ 1
Ccdc28a-203ENSMUST00000173243 Cngb1E1AZ71 1325 aa21.26■□□□□ 0.99
Ccdc28a-203ENSMUST00000173243 LrpprcQ6PB66 1392 aaKnown RBP21.21■□□□□ 0.99
Ccdc28a-203ENSMUST00000173243 Eif4g3Q80XI3 1579 aaKnown RBP21.2■□□□□ 0.98
Ccdc28a-203ENSMUST00000173243 Dhx29Q6PGC1 1365 aaKnown RBP21.2■□□□□ 0.98
Ccdc28a-203ENSMUST00000173243 Urb2E9Q7L1 1524 aaKnown RBP21.14■□□□□ 0.98
Ccdc28a-203ENSMUST00000173243 Crocc2F6XLV1 1638 aa21.13■□□□□ 0.97
Ccdc28a-203ENSMUST00000173243 Plb1Q3TTY0 1478 aa21.1■□□□□ 0.97
Ccdc28a-203ENSMUST00000173243 PogzQ8BZH4 1409 aaKnown RBP21.1■□□□□ 0.97
Ccdc28a-203ENSMUST00000173243 Il27Q8K3I6 234 aa21.09■□□□□ 0.97
Ccdc28a-203ENSMUST00000173243 Ift140E9PY46 1464 aa21■□□□□ 0.95
Ccdc28a-203ENSMUST00000173243 Grin2bQ01097 1482 aa20.99■□□□□ 0.95
Ccdc28a-203ENSMUST00000173243 Duox2A2AQ99 1517 aa20.98■□□□□ 0.95
Ccdc28a-203ENSMUST00000173243 Shroom2A2ALU4 1481 aa20.92■□□□□ 0.94
Ccdc28a-203ENSMUST00000173243 Efcab5A0JP43 1406 aa20.9■□□□□ 0.94
Ccdc28a-203ENSMUST00000173243 Top2aQ01320 1528 aaKnown RBP20.89■□□□□ 0.94
Ccdc28a-203ENSMUST00000173243 Ccdc88bQ4QRL3 1481 aa20.89■□□□□ 0.94
Ccdc28a-203ENSMUST00000173243 Rusc2Q80U22 1514 aa20.88■□□□□ 0.93
Ccdc28a-203ENSMUST00000173243 Pbrm1Q8BSQ9 1634 aaKnown RBP20.83■□□□□ 0.93
Ccdc28a-203ENSMUST00000173243 NrkQ9R0G8 1455 aa20.82■□□□□ 0.92
Ccdc28a-203ENSMUST00000173243 Dnajc5P60904 198 aa20.82■□□□□ 0.92
Ccdc28a-203ENSMUST00000173243 Disp1Q3TDN0 1521 aa20.82■□□□□ 0.92
Ccdc28a-203ENSMUST00000173243 Samd9lQ69Z37 1561 aa20.8■□□□□ 0.92
Ccdc28a-203ENSMUST00000173243 Nup160Q9Z0W3 1402 aaKnown RBP20.77■□□□□ 0.91
Ccdc28a-203ENSMUST00000173243 Setd1bQ8CFT2 1985 aa20.74■□□□□ 0.91
Ccdc28a-203ENSMUST00000173243 Cc2d2bA0A286YDU8 1405 aa20.74■□□□□ 0.91
Ccdc28a-203ENSMUST00000173243 Chic1Q8CBW7 227 aa20.7■□□□□ 0.9
Ccdc28a-203ENSMUST00000173243 Shroom4Q1W617 1475 aa20.69■□□□□ 0.9
Ccdc28a-203ENSMUST00000173243 Gpatch8A2A6A1 1505 aa20.65■□□□□ 0.9
Ccdc28a-203ENSMUST00000173243 Magi3Q9EQJ9 1476 aa20.63■□□□□ 0.89
Ccdc28a-203ENSMUST00000173243 Pabpn1Q8CCS6 302 aaKnown RBP20.63■□□□□ 0.89
Ccdc28a-203ENSMUST00000173243 Grin2aP35436 1464 aa20.62■□□□□ 0.89
Ccdc28a-203ENSMUST00000173243 PtprkP35822 1457 aa20.61■□□□□ 0.89
Ccdc28a-203ENSMUST00000173243 Rad54l2Q99NG0 1466 aa20.61■□□□□ 0.89
Ccdc28a-203ENSMUST00000173243 AqrQ8CFQ3 1481 aaKnown RBP20.57■□□□□ 0.88
Ccdc28a-203ENSMUST00000173243 SynmQ70IV5 1561 aa20.56■□□□□ 0.88
Ccdc28a-203ENSMUST00000173243 Col17a1Q07563 1470 aa20.56■□□□□ 0.88
Ccdc28a-203ENSMUST00000173243 Pla2r1Q62028 1487 aa20.5■□□□□ 0.87
Ccdc28a-203ENSMUST00000173243 HrcG5E8J6 738 aa20.49■□□□□ 0.87
Ccdc28a-203ENSMUST00000173243 Zcchc11B2RX14 1644 aaKnown RBP20.48■□□□□ 0.87
Ccdc28a-203ENSMUST00000173243 Fgd6Q69ZL1 1399 aa20.46■□□□□ 0.87
Ccdc28a-203ENSMUST00000173243 Mroh2bQ7M6Y6 1581 aa20.42■□□□□ 0.86
Ccdc28a-203ENSMUST00000173243 Pelp1Q9DBD5 1123 aaKnown RBP20.4■□□□□ 0.86
Ccdc28a-203ENSMUST00000173243 Zeb1Q64318 1117 aa20.33■□□□□ 0.85
Ccdc28a-203ENSMUST00000173243 Adamts12Q811B3 1600 aa20.31■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 137.5 ms