Protein–RNA interactions for Protein: Q6PDM1

Msl1, Male-specific lethal 1 homolog, mousemouse

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msl1Q6PDM1 Gm25239-201ENSMUST00000174915 86 ntBASIC50.54■■■■■ 5.68
Msl1Q6PDM1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC47.11■■■■■ 5.13
Msl1Q6PDM1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC46.28■■■■■ 5
Msl1Q6PDM1 Gm24109-201ENSMUST00000175489 103 ntBASIC44.21■■■■■ 4.67
Msl1Q6PDM1 Gm15042-201ENSMUST00000120212 883 ntBASIC43.46■■■■■ 4.55
Msl1Q6PDM1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC42.68■■■■■ 4.42
Msl1Q6PDM1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC42.62■■■■■ 4.41
Msl1Q6PDM1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC42.44■■■■■ 4.38
Msl1Q6PDM1 Gm15045-201ENSMUST00000117359 883 ntBASIC42.38■■■■■ 4.37
Msl1Q6PDM1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC42.3■■■■■ 4.36
Msl1Q6PDM1 Gm23366-201ENSMUST00000175022 89 ntBASIC42.07■■■■■ 4.33
Msl1Q6PDM1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC41.49■■■■■ 4.23
Msl1Q6PDM1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC41.08■■■■■ 4.17
Msl1Q6PDM1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC41.04■■■■■ 4.16
Msl1Q6PDM1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC40.99■■■■■ 4.15
Msl1Q6PDM1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC40.87■■■■■ 4.13
Msl1Q6PDM1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC40.59■■■■■ 4.09
Msl1Q6PDM1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC40.3■■■■■ 4.04
Msl1Q6PDM1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC40.23■■■■■ 4.03
Msl1Q6PDM1 Gm25238-201ENSMUST00000174914 89 ntBASIC40.13■■■■■ 4.01
Msl1Q6PDM1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC40.11■■■■■ 4.01
Msl1Q6PDM1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC40.06■■■■■ 4
Msl1Q6PDM1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
Msl1Q6PDM1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
Msl1Q6PDM1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC39.25■■■■□ 3.87
Msl1Q6PDM1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
Msl1Q6PDM1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC39.18■■■■□ 3.86
Msl1Q6PDM1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
Msl1Q6PDM1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC38.88■■■■□ 3.81
Msl1Q6PDM1 Gm25262-201ENSMUST00000174934 133 ntBASIC38.75■■■■□ 3.79
Msl1Q6PDM1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
Msl1Q6PDM1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38.63■■■■□ 3.77
Msl1Q6PDM1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC38.62■■■■□ 3.77
Msl1Q6PDM1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC38.6■■■■□ 3.77
Msl1Q6PDM1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC38.52■■■■□ 3.76
Msl1Q6PDM1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.43■■■■□ 3.74
Msl1Q6PDM1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38.41■■■■□ 3.74
Msl1Q6PDM1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC38.31■■■■□ 3.72
Msl1Q6PDM1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
Msl1Q6PDM1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC38.23■■■■□ 3.71
Msl1Q6PDM1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC38.17■■■■□ 3.7
Msl1Q6PDM1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC38.17■■■■□ 3.7
Msl1Q6PDM1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC38.11■■■■□ 3.69
Msl1Q6PDM1 Gm26115-201ENSMUST00000175605 87 ntBASIC38.07■■■■□ 3.68
Msl1Q6PDM1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC38.06■■■■□ 3.68
Msl1Q6PDM1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
Msl1Q6PDM1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.98■■■■□ 3.67
Msl1Q6PDM1 Gm27325-201ENSMUST00000175467 74 ntBASIC37.93■■■■□ 3.66
Msl1Q6PDM1 Gm8109-201ENSMUST00000194076 746 ntBASIC37.85■■■■□ 3.65
Msl1Q6PDM1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
Msl1Q6PDM1 Rab21-202ENSMUST00000218831 843 ntBASIC37.69■■■■□ 3.62
Msl1Q6PDM1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC37.69■■■■□ 3.62
Msl1Q6PDM1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
Msl1Q6PDM1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
Msl1Q6PDM1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
Msl1Q6PDM1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC37.43■■■■□ 3.58
Msl1Q6PDM1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC37.31■■■■□ 3.56
Msl1Q6PDM1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
Msl1Q6PDM1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
Msl1Q6PDM1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC37.18■■■■□ 3.54
Msl1Q6PDM1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37.17■■■■□ 3.54
Msl1Q6PDM1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.13■■■■□ 3.53
Msl1Q6PDM1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC37.04■■■■□ 3.52
Msl1Q6PDM1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.99■■■■□ 3.51
Msl1Q6PDM1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
Msl1Q6PDM1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC36.95■■■■□ 3.51
Msl1Q6PDM1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC36.91■■■■□ 3.5
Msl1Q6PDM1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC36.75■■■■□ 3.47
Msl1Q6PDM1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
Msl1Q6PDM1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC36.67■■■■□ 3.46
Msl1Q6PDM1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
Msl1Q6PDM1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC36.64■■■■□ 3.46
Msl1Q6PDM1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC36.56■■■■□ 3.44
Msl1Q6PDM1 Gm17082-201ENSMUST00000166043 1091 ntBASIC36.55■■■■□ 3.44
Msl1Q6PDM1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC36.55■■■■□ 3.44
Msl1Q6PDM1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36.53■■■■□ 3.44
Msl1Q6PDM1 Gm24804-201ENSMUST00000174982 85 ntBASIC36.49■■■■□ 3.43
Msl1Q6PDM1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
Msl1Q6PDM1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
Msl1Q6PDM1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36.25■■■■□ 3.39
Msl1Q6PDM1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC36.24■■■■□ 3.39
Msl1Q6PDM1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36.23■■■■□ 3.39
Msl1Q6PDM1 Psd-208ENSMUST00000224556 2034 ntBASIC36.23■■■■□ 3.39
Msl1Q6PDM1 Gm27322-201ENSMUST00000184007 104 ntBASIC36.15■■■■□ 3.38
Msl1Q6PDM1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC36.13■■■■□ 3.37
Msl1Q6PDM1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC36.13■■■■□ 3.37
Msl1Q6PDM1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC36.11■■■■□ 3.37
Msl1Q6PDM1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC36.08■■■■□ 3.37
Msl1Q6PDM1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Msl1Q6PDM1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC36.03■■■■□ 3.36
Msl1Q6PDM1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC36.02■■■■□ 3.36
Msl1Q6PDM1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC36.01■■■■□ 3.36
Msl1Q6PDM1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC36.01■■■■□ 3.35
Msl1Q6PDM1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC35.99■■■■□ 3.35
Msl1Q6PDM1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Msl1Q6PDM1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC35.9■■■■□ 3.34
Msl1Q6PDM1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Msl1Q6PDM1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
Msl1Q6PDM1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35.82■■■■□ 3.33
Msl1Q6PDM1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms