Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Gm25239-201ENSMUST00000174915 86 ntBASIC50,46■■■■■ 5,67
Col23a1Q8K4G2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC47,01■■■■■ 5,12
Col23a1Q8K4G2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC46,22■■■■■ 4,99
Col23a1Q8K4G2 Gm24109-201ENSMUST00000175489 103 ntBASIC44,08■■■■■ 4,65
Col23a1Q8K4G2 Gm15042-201ENSMUST00000120212 883 ntBASIC43,36■■■■■ 4,53
Col23a1Q8K4G2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC42,65■■■■■ 4,42
Col23a1Q8K4G2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC42,53■■■■■ 4,4
Col23a1Q8K4G2 Gm15045-201ENSMUST00000117359 883 ntBASIC42,33■■■■■ 4,37
Col23a1Q8K4G2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC42,33■■■■■ 4,37
Col23a1Q8K4G2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC42,21■■■■■ 4,35
Col23a1Q8K4G2 Gm23366-201ENSMUST00000175022 89 ntBASIC42■■■■■ 4,31
Col23a1Q8K4G2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC41,39■■■■■ 4,22
Col23a1Q8K4G2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC40,97■■■■■ 4,15
Col23a1Q8K4G2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC40,94■■■■■ 4,14
Col23a1Q8K4G2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC40,94■■■■■ 4,14
Col23a1Q8K4G2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC40,77■■■■■ 4,12
Col23a1Q8K4G2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC40,58■■■■■ 4,09
Col23a1Q8K4G2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC40,26■■■■■ 4,04
Col23a1Q8K4G2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC40,2■■■■■ 4,03
Col23a1Q8K4G2 Gm25238-201ENSMUST00000174914 89 ntBASIC40,1■■■■■ 4,01
Col23a1Q8K4G2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC40,07■■■■■ 4,01
Col23a1Q8K4G2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC40,04■■■■■ 4
Col23a1Q8K4G2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39,41■■■■□ 3,9
Col23a1Q8K4G2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39,2■■■■□ 3,87
Col23a1Q8K4G2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC39,19■■■■□ 3,86
Col23a1Q8K4G2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC39,14■■■■□ 3,86
Col23a1Q8K4G2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC39,09■■■■□ 3,85
Col23a1Q8K4G2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC38,93■■■■□ 3,82
Col23a1Q8K4G2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC38,83■■■■□ 3,81
Col23a1Q8K4G2 Gm25262-201ENSMUST00000174934 133 ntBASIC38,7■■■■□ 3,79
Col23a1Q8K4G2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC38,64■■■■□ 3,78
Col23a1Q8K4G2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC38,63■■■■□ 3,77
Col23a1Q8K4G2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC38,57■■■■□ 3,76
Col23a1Q8K4G2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38,49■■■■□ 3,75
Col23a1Q8K4G2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC38,32■■■■□ 3,72
Col23a1Q8K4G2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38,26■■■■□ 3,72
Col23a1Q8K4G2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC38,25■■■■□ 3,71
Col23a1Q8K4G2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38,23■■■■□ 3,71
Col23a1Q8K4G2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC38,18■■■■□ 3,7
Col23a1Q8K4G2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC38,15■■■■□ 3,7
Col23a1Q8K4G2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC38,07■■■■□ 3,68
Col23a1Q8K4G2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38,06■■■■□ 3,68
Col23a1Q8K4G2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC38,04■■■■□ 3,68
Col23a1Q8K4G2 Gm26115-201ENSMUST00000175605 87 ntBASIC38,02■■■■□ 3,68
Col23a1Q8K4G2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC38,01■■■■□ 3,68
Col23a1Q8K4G2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37,94■■■■□ 3,66
Col23a1Q8K4G2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC37,9■■■■□ 3,66
Col23a1Q8K4G2 Gm27325-201ENSMUST00000175467 74 ntBASIC37,89■■■■□ 3,66
Col23a1Q8K4G2 Gm8109-201ENSMUST00000194076 746 ntBASIC37,76■■■■□ 3,64
Col23a1Q8K4G2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC37,74■■■■□ 3,63
Col23a1Q8K4G2 Rab21-202ENSMUST00000218831 843 ntBASIC37,64■■■■□ 3,62
Col23a1Q8K4G2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC37,63■■■■□ 3,61
Col23a1Q8K4G2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC37,6■■■■□ 3,61
Col23a1Q8K4G2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC37,45■■■■□ 3,59
Col23a1Q8K4G2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC37,38■■■■□ 3,57
Col23a1Q8K4G2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC37,36■■■■□ 3,57
Col23a1Q8K4G2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC37,24■■■■□ 3,55
Col23a1Q8K4G2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC37,22■■■■□ 3,55
Col23a1Q8K4G2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC37,21■■■■□ 3,55
Col23a1Q8K4G2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37,19■■■■□ 3,54
Col23a1Q8K4G2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC37,02■■■■□ 3,52
Col23a1Q8K4G2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37■■■■□ 3,51
Col23a1Q8K4G2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36,95■■■■□ 3,51
Col23a1Q8K4G2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC36,9■■■■□ 3,5
Col23a1Q8K4G2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC36,89■■■■□ 3,5
Col23a1Q8K4G2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36,89■■■■□ 3,5
Col23a1Q8K4G2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC36,84■■■■□ 3,49
Col23a1Q8K4G2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC36,69■■■■□ 3,46
Col23a1Q8K4G2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC36,68■■■■□ 3,46
Col23a1Q8K4G2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC36,68■■■■□ 3,46
Col23a1Q8K4G2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC36,59■■■■□ 3,45
Col23a1Q8K4G2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC36,57■■■■□ 3,44
Col23a1Q8K4G2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC36,52■■■■□ 3,44
Col23a1Q8K4G2 Gm17082-201ENSMUST00000166043 1091 ntBASIC36,51■■■■□ 3,44
Col23a1Q8K4G2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC36,49■■■■□ 3,43
Col23a1Q8K4G2 Gm24804-201ENSMUST00000174982 85 ntBASIC36,48■■■■□ 3,43
Col23a1Q8K4G2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC36,43■■■■□ 3,42
Col23a1Q8K4G2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36,33■■■■□ 3,41
Col23a1Q8K4G2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC36,31■■■■□ 3,4
Col23a1Q8K4G2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36,16■■■■□ 3,38
Col23a1Q8K4G2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC36,13■■■■□ 3,37
Col23a1Q8K4G2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36,09■■■■□ 3,37
Col23a1Q8K4G2 Gm27322-201ENSMUST00000184007 104 ntBASIC36,07■■■■□ 3,36
Col23a1Q8K4G2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC36,07■■■■□ 3,36
Col23a1Q8K4G2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC36,05■■■■□ 3,36
Col23a1Q8K4G2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC36,04■■■■□ 3,36
Col23a1Q8K4G2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC36,04■■■■□ 3,36
Col23a1Q8K4G2 Psd-208ENSMUST00000224556 2034 ntBASIC36,02■■■■□ 3,36
Col23a1Q8K4G2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC35,99■■■■□ 3,35
Col23a1Q8K4G2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC35,94■■■■□ 3,34
Col23a1Q8K4G2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC35,92■■■■□ 3,34
Col23a1Q8K4G2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC35,91■■■■□ 3,34
Col23a1Q8K4G2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC35,9■■■■□ 3,34
Col23a1Q8K4G2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC35,87■■■■□ 3,33
Col23a1Q8K4G2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC35,87■■■■□ 3,33
Col23a1Q8K4G2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC35,87■■■■□ 3,33
Col23a1Q8K4G2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC35,8■■■■□ 3,32
Col23a1Q8K4G2 Zfp131-205ENSMUST00000223812 663 ntBASIC35,75■■■■□ 3,31
Col23a1Q8K4G2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC35,75■■■■□ 3,31
Col23a1Q8K4G2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC35,73■■■■□ 3,31
Retrieved 100 of 76,532 protein–RNA pairs in 15,5 ms