Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm25239-201ENSMUST00000174915 86 ntBASIC48,98■■■■■ 5,43
Trim52Q8CDV4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC45,28■■■■■ 4,84
Trim52Q8CDV4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC44,62■■■■■ 4,73
Trim52Q8CDV4 Gm15042-201ENSMUST00000120212 883 ntBASIC42,8■■■■■ 4,44
Trim52Q8CDV4 Gm24109-201ENSMUST00000175489 103 ntBASIC42,5■■■■■ 4,39
Trim52Q8CDV4 Gm15045-201ENSMUST00000117359 883 ntBASIC41,91■■■■■ 4,3
Trim52Q8CDV4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC41,9■■■■■ 4,3
Trim52Q8CDV4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC41,45■■■■■ 4,23
Trim52Q8CDV4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC41,36■■■■■ 4,21
Trim52Q8CDV4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC41,21■■■■■ 4,19
Trim52Q8CDV4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC41■■■■■ 4,15
Trim52Q8CDV4 Gm23366-201ENSMUST00000175022 89 ntBASIC40,88■■■■■ 4,13
Trim52Q8CDV4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC40,69■■■■■ 4,1
Trim52Q8CDV4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC40,58■■■■■ 4,09
Trim52Q8CDV4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC39,94■■■■□ 3,98
Trim52Q8CDV4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC39,71■■■■□ 3,95
Trim52Q8CDV4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC39,55■■■■□ 3,92
Trim52Q8CDV4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC39,54■■■■□ 3,92
Trim52Q8CDV4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC39,5■■■■□ 3,91
Trim52Q8CDV4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC39,47■■■■□ 3,91
Trim52Q8CDV4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC39,33■■■■□ 3,89
Trim52Q8CDV4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC39,29■■■■□ 3,88
Trim52Q8CDV4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC39,11■■■■□ 3,85
Trim52Q8CDV4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC39,01■■■■□ 3,84
Trim52Q8CDV4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC38,99■■■■□ 3,83
Trim52Q8CDV4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38,99■■■■□ 3,83
Trim52Q8CDV4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC38,93■■■■□ 3,82
Trim52Q8CDV4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC38,87■■■■□ 3,81
Trim52Q8CDV4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC38,82■■■■□ 3,8
Trim52Q8CDV4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC38,79■■■■□ 3,8
Trim52Q8CDV4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC38,78■■■■□ 3,8
Trim52Q8CDV4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC38,7■■■■□ 3,79
Trim52Q8CDV4 Gm25238-201ENSMUST00000174914 89 ntBASIC38,68■■■■□ 3,78
Trim52Q8CDV4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC38,6■■■■□ 3,77
Trim52Q8CDV4 Psd-208ENSMUST00000224556 2034 ntBASIC38,53■■■■□ 3,76
Trim52Q8CDV4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC38,49■■■■□ 3,75
Trim52Q8CDV4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC38,39■■■■□ 3,74
Trim52Q8CDV4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC38,01■■■■□ 3,67
Trim52Q8CDV4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC37,93■■■■□ 3,66
Trim52Q8CDV4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC37,75■■■■□ 3,63
Trim52Q8CDV4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC37,71■■■■□ 3,63
Trim52Q8CDV4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC37,63■■■■□ 3,61
Trim52Q8CDV4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC37,59■■■■□ 3,61
Trim52Q8CDV4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC37,56■■■■□ 3,6
Trim52Q8CDV4 Gm27325-201ENSMUST00000175467 74 ntBASIC37,53■■■■□ 3,6
Trim52Q8CDV4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC37,48■■■■□ 3,59
Trim52Q8CDV4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC37,47■■■■□ 3,59
Trim52Q8CDV4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC37,44■■■■□ 3,58
Trim52Q8CDV4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC37,44■■■■□ 3,58
Trim52Q8CDV4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC37,3■■■■□ 3,56
Trim52Q8CDV4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC37,22■■■■□ 3,55
Trim52Q8CDV4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC37,12■■■■□ 3,53
Trim52Q8CDV4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC37,09■■■■□ 3,53
Trim52Q8CDV4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC37,03■■■■□ 3,52
Trim52Q8CDV4 Gm25262-201ENSMUST00000174934 133 ntBASIC36,99■■■■□ 3,51
Trim52Q8CDV4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC36,93■■■■□ 3,5
Trim52Q8CDV4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC36,9■■■■□ 3,5
Trim52Q8CDV4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC36,87■■■■□ 3,49
Trim52Q8CDV4 Rab21-202ENSMUST00000218831 843 ntBASIC36,83■■■■□ 3,49
Trim52Q8CDV4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36,82■■■■□ 3,49
Trim52Q8CDV4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC36,7■■■■□ 3,47
Trim52Q8CDV4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC36,63■■■■□ 3,45
Trim52Q8CDV4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC36,63■■■■□ 3,45
Trim52Q8CDV4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC36,62■■■■□ 3,45
Trim52Q8CDV4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC36,49■■■■□ 3,43
Trim52Q8CDV4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC36,47■■■■□ 3,43
Trim52Q8CDV4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC36,46■■■■□ 3,43
Trim52Q8CDV4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC36,45■■■■□ 3,43
Trim52Q8CDV4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC36,44■■■■□ 3,42
Trim52Q8CDV4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC36,43■■■■□ 3,42
Trim52Q8CDV4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC36,38■■■■□ 3,41
Trim52Q8CDV4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC36,37■■■■□ 3,41
Trim52Q8CDV4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC36,35■■■■□ 3,41
Trim52Q8CDV4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC36,34■■■■□ 3,41
Trim52Q8CDV4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC36,34■■■■□ 3,41
Trim52Q8CDV4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC36,32■■■■□ 3,4
Trim52Q8CDV4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC36,28■■■■□ 3,4
Trim52Q8CDV4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC36,28■■■■□ 3,4
Trim52Q8CDV4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC36,26■■■■□ 3,4
Trim52Q8CDV4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC36,17■■■■□ 3,38
Trim52Q8CDV4 Gm10524-201ENSMUST00000181931 1893 ntBASIC36,16■■■■□ 3,38
Trim52Q8CDV4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC36,15■■■■□ 3,38
Trim52Q8CDV4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC36,14■■■■□ 3,38
Trim52Q8CDV4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC36,08■■■■□ 3,37
Trim52Q8CDV4 Gm26115-201ENSMUST00000175605 87 ntBASIC36,06■■■■□ 3,36
Trim52Q8CDV4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC36,02■■■■□ 3,36
Trim52Q8CDV4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC36,01■■■■□ 3,35
Trim52Q8CDV4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC35,99■■■■□ 3,35
Trim52Q8CDV4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35,99■■■■□ 3,35
Trim52Q8CDV4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC35,97■■■■□ 3,35
Trim52Q8CDV4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC35,91■■■■□ 3,34
Trim52Q8CDV4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC35,9■■■■□ 3,34
Trim52Q8CDV4 Gm8109-201ENSMUST00000194076 746 ntBASIC35,89■■■■□ 3,34
Trim52Q8CDV4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC35,86■■■■□ 3,33
Trim52Q8CDV4 Gm42596-201ENSMUST00000196305 1958 ntBASIC35,85■■■■□ 3,33
Trim52Q8CDV4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35,85■■■■□ 3,33
Trim52Q8CDV4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC35,81■■■■□ 3,32
Trim52Q8CDV4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC35,76■■■■□ 3,31
Trim52Q8CDV4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC35,7■■■■□ 3,31
Trim52Q8CDV4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC35,69■■■■□ 3,3
Retrieved 100 of 76,532 protein–RNA pairs in 19,6 ms