Protein–RNA interactions for Protein: Q8R1M0

Hmces, Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein, mousemouse

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmcesQ8R1M0 Gm25239-201ENSMUST00000174915 86 ntBASIC49.86■■■■■ 5.57
HmcesQ8R1M0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC46.28■■■■■ 5
HmcesQ8R1M0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC45.59■■■■■ 4.89
HmcesQ8R1M0 Gm24109-201ENSMUST00000175489 103 ntBASIC43.38■■■■■ 4.53
HmcesQ8R1M0 Gm15042-201ENSMUST00000120212 883 ntBASIC43.19■■■■■ 4.5
HmcesQ8R1M0 Gm15045-201ENSMUST00000117359 883 ntBASIC42.18■■■■■ 4.34
HmcesQ8R1M0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC42.12■■■■■ 4.33
HmcesQ8R1M0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC42.04■■■■■ 4.32
HmcesQ8R1M0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC41.99■■■■■ 4.31
HmcesQ8R1M0 Gm23366-201ENSMUST00000175022 89 ntBASIC41.59■■■■■ 4.25
HmcesQ8R1M0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC41.39■■■■■ 4.22
HmcesQ8R1M0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC40.61■■■■■ 4.09
HmcesQ8R1M0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40.58■■■■■ 4.09
HmcesQ8R1M0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC40.35■■■■■ 4.05
HmcesQ8R1M0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC40.24■■■■■ 4.03
HmcesQ8R1M0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC40.2■■■■■ 4.03
HmcesQ8R1M0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC40.17■■■■■ 4.02
HmcesQ8R1M0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC40.11■■■■■ 4.01
HmcesQ8R1M0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC39.96■■■■□ 3.99
HmcesQ8R1M0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
HmcesQ8R1M0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
HmcesQ8R1M0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
HmcesQ8R1M0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC39.51■■■■□ 3.92
HmcesQ8R1M0 Gm25238-201ENSMUST00000174914 89 ntBASIC39.48■■■■□ 3.91
HmcesQ8R1M0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC39.35■■■■□ 3.89
HmcesQ8R1M0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39.34■■■■□ 3.89
HmcesQ8R1M0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
HmcesQ8R1M0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC39.02■■■■□ 3.84
HmcesQ8R1M0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
HmcesQ8R1M0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
HmcesQ8R1M0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC38.69■■■■□ 3.78
HmcesQ8R1M0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC38.65■■■■□ 3.78
HmcesQ8R1M0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38.62■■■■□ 3.77
HmcesQ8R1M0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC38.5■■■■□ 3.75
HmcesQ8R1M0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC38.36■■■■□ 3.73
HmcesQ8R1M0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC38.33■■■■□ 3.73
HmcesQ8R1M0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC38.25■■■■□ 3.71
HmcesQ8R1M0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC38.19■■■■□ 3.7
HmcesQ8R1M0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
HmcesQ8R1M0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.68
HmcesQ8R1M0 Gm25262-201ENSMUST00000174934 133 ntBASIC38.01■■■■□ 3.68
HmcesQ8R1M0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC37.83■■■■□ 3.65
HmcesQ8R1M0 Gm27325-201ENSMUST00000175467 74 ntBASIC37.79■■■■□ 3.64
HmcesQ8R1M0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.78■■■■□ 3.64
HmcesQ8R1M0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37.69■■■■□ 3.62
HmcesQ8R1M0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
HmcesQ8R1M0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC37.47■■■■□ 3.59
HmcesQ8R1M0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC37.46■■■■□ 3.59
HmcesQ8R1M0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
HmcesQ8R1M0 Rab21-202ENSMUST00000218831 843 ntBASIC37.36■■■■□ 3.57
HmcesQ8R1M0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC37.34■■■■□ 3.57
HmcesQ8R1M0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC37.3■■■■□ 3.56
HmcesQ8R1M0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC37.28■■■■□ 3.56
HmcesQ8R1M0 Gm26115-201ENSMUST00000175605 87 ntBASIC37.22■■■■□ 3.55
HmcesQ8R1M0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
HmcesQ8R1M0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
HmcesQ8R1M0 Psd-208ENSMUST00000224556 2034 ntBASIC37.07■■■■□ 3.53
HmcesQ8R1M0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC37.01■■■■□ 3.52
HmcesQ8R1M0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
HmcesQ8R1M0 Gm8109-201ENSMUST00000194076 746 ntBASIC36.97■■■■□ 3.51
HmcesQ8R1M0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36.96■■■■□ 3.51
HmcesQ8R1M0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC36.96■■■■□ 3.51
HmcesQ8R1M0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
HmcesQ8R1M0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
HmcesQ8R1M0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC36.88■■■■□ 3.49
HmcesQ8R1M0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC36.86■■■■□ 3.49
HmcesQ8R1M0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36.76■■■■□ 3.48
HmcesQ8R1M0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
HmcesQ8R1M0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.44
HmcesQ8R1M0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC36.56■■■■□ 3.44
HmcesQ8R1M0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36.54■■■■□ 3.44
HmcesQ8R1M0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC36.53■■■■□ 3.44
HmcesQ8R1M0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC36.53■■■■□ 3.44
HmcesQ8R1M0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
HmcesQ8R1M0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
HmcesQ8R1M0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC36.37■■■■□ 3.41
HmcesQ8R1M0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC36.34■■■■□ 3.41
HmcesQ8R1M0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36.31■■■■□ 3.4
HmcesQ8R1M0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
HmcesQ8R1M0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC36.29■■■■□ 3.4
HmcesQ8R1M0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC36.29■■■■□ 3.4
HmcesQ8R1M0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
HmcesQ8R1M0 Gm17082-201ENSMUST00000166043 1091 ntBASIC36.1■■■■□ 3.37
HmcesQ8R1M0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC36.06■■■■□ 3.36
HmcesQ8R1M0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC35.99■■■■□ 3.35
HmcesQ8R1M0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35.98■■■■□ 3.35
HmcesQ8R1M0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC35.95■■■■□ 3.35
HmcesQ8R1M0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
HmcesQ8R1M0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35.93■■■■□ 3.34
HmcesQ8R1M0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
HmcesQ8R1M0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
HmcesQ8R1M0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC35.87■■■■□ 3.33
HmcesQ8R1M0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC35.86■■■■□ 3.33
HmcesQ8R1M0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC35.79■■■■□ 3.32
HmcesQ8R1M0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
HmcesQ8R1M0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
HmcesQ8R1M0 Gm24804-201ENSMUST00000174982 85 ntBASIC35.76■■■■□ 3.32
HmcesQ8R1M0 Gm27322-201ENSMUST00000184007 104 ntBASIC35.74■■■■□ 3.31
HmcesQ8R1M0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35.7■■■■□ 3.31
HmcesQ8R1M0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC35.68■■■■□ 3.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms