Protein–RNA interactions for Protein: Q91X60

Chrna2, Neuronal acetylcholine receptor subunit alpha-2, mousemouse

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna2Q91X60 Gm25239-201ENSMUST00000174915 86 ntBASIC50.57■■■■■ 5.69
Chrna2Q91X60 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC47.16■■■■■ 5.14
Chrna2Q91X60 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC46.4■■■■■ 5.02
Chrna2Q91X60 Gm24109-201ENSMUST00000175489 103 ntBASIC44.28■■■■■ 4.68
Chrna2Q91X60 Gm15042-201ENSMUST00000120212 883 ntBASIC43.43■■■■■ 4.54
Chrna2Q91X60 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC42.81■■■■■ 4.44
Chrna2Q91X60 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC42.71■■■■■ 4.43
Chrna2Q91X60 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC42.52■■■■■ 4.4
Chrna2Q91X60 Gm15045-201ENSMUST00000117359 883 ntBASIC42.28■■■■■ 4.36
Chrna2Q91X60 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC42.24■■■■■ 4.35
Chrna2Q91X60 Gm23366-201ENSMUST00000175022 89 ntBASIC42.13■■■■■ 4.33
Chrna2Q91X60 AC153911.1-202ENSMUST00000218534 1034 ntBASIC41.58■■■■■ 4.25
Chrna2Q91X60 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC41.2■■■■■ 4.19
Chrna2Q91X60 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC41.07■■■■■ 4.17
Chrna2Q91X60 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC41.06■■■■■ 4.16
Chrna2Q91X60 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC41.03■■■■■ 4.16
Chrna2Q91X60 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC40.59■■■■■ 4.09
Chrna2Q91X60 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC40.34■■■■■ 4.05
Chrna2Q91X60 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC40.26■■■■■ 4.04
Chrna2Q91X60 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC40.22■■■■■ 4.03
Chrna2Q91X60 Gm25238-201ENSMUST00000174914 89 ntBASIC40.16■■■■■ 4.02
Chrna2Q91X60 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC40.1■■■■■ 4.01
Chrna2Q91X60 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
Chrna2Q91X60 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC39.27■■■■□ 3.88
Chrna2Q91X60 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC39.21■■■■□ 3.87
Chrna2Q91X60 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
Chrna2Q91X60 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC39.17■■■■□ 3.86
Chrna2Q91X60 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC38.93■■■■□ 3.82
Chrna2Q91X60 Gm25262-201ENSMUST00000174934 133 ntBASIC38.88■■■■□ 3.81
Chrna2Q91X60 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
Chrna2Q91X60 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC38.64■■■■□ 3.78
Chrna2Q91X60 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC38.64■■■■□ 3.78
Chrna2Q91X60 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.78
Chrna2Q91X60 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38.48■■■■□ 3.75
Chrna2Q91X60 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC38.42■■■■□ 3.74
Chrna2Q91X60 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC38.4■■■■□ 3.74
Chrna2Q91X60 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC38.36■■■■□ 3.73
Chrna2Q91X60 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC38.3■■■■□ 3.72
Chrna2Q91X60 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC38.3■■■■□ 3.72
Chrna2Q91X60 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38.24■■■■□ 3.71
Chrna2Q91X60 Gm26115-201ENSMUST00000175605 87 ntBASIC38.23■■■■□ 3.71
Chrna2Q91X60 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC38.19■■■■□ 3.7
Chrna2Q91X60 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.19■■■■□ 3.7
Chrna2Q91X60 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
Chrna2Q91X60 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC38.07■■■■□ 3.68
Chrna2Q91X60 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
Chrna2Q91X60 Gm8109-201ENSMUST00000194076 746 ntBASIC37.95■■■■□ 3.67
Chrna2Q91X60 Gm27325-201ENSMUST00000175467 74 ntBASIC37.88■■■■□ 3.65
Chrna2Q91X60 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC37.86■■■■□ 3.65
Chrna2Q91X60 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.8■■■■□ 3.64
Chrna2Q91X60 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
Chrna2Q91X60 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC37.73■■■■□ 3.63
Chrna2Q91X60 Rab21-202ENSMUST00000218831 843 ntBASIC37.7■■■■□ 3.63
Chrna2Q91X60 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC37.58■■■■□ 3.61
Chrna2Q91X60 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC37.44■■■■□ 3.58
Chrna2Q91X60 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
Chrna2Q91X60 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
Chrna2Q91X60 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC37.24■■■■□ 3.55
Chrna2Q91X60 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC37.16■■■■□ 3.54
Chrna2Q91X60 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
Chrna2Q91X60 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC37.1■■■■□ 3.53
Chrna2Q91X60 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC37.01■■■■□ 3.52
Chrna2Q91X60 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37■■■■□ 3.51
Chrna2Q91X60 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Chrna2Q91X60 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36.95■■■■□ 3.51
Chrna2Q91X60 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC36.92■■■■□ 3.5
Chrna2Q91X60 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.85■■■■□ 3.49
Chrna2Q91X60 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC36.78■■■■□ 3.48
Chrna2Q91X60 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
Chrna2Q91X60 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
Chrna2Q91X60 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC36.68■■■■□ 3.46
Chrna2Q91X60 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC36.66■■■■□ 3.46
Chrna2Q91X60 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.45
Chrna2Q91X60 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC36.56■■■■□ 3.44
Chrna2Q91X60 Gm24804-201ENSMUST00000174982 85 ntBASIC36.55■■■■□ 3.44
Chrna2Q91X60 Gm17082-201ENSMUST00000166043 1091 ntBASIC36.52■■■■□ 3.44
Chrna2Q91X60 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC36.5■■■■□ 3.43
Chrna2Q91X60 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
Chrna2Q91X60 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
Chrna2Q91X60 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36.37■■■■□ 3.41
Chrna2Q91X60 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC36.31■■■■□ 3.4
Chrna2Q91X60 Gm27322-201ENSMUST00000184007 104 ntBASIC36.25■■■■□ 3.39
Chrna2Q91X60 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC36.15■■■■□ 3.38
Chrna2Q91X60 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC36.14■■■■□ 3.38
Chrna2Q91X60 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC36.13■■■■□ 3.37
Chrna2Q91X60 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36.1■■■■□ 3.37
Chrna2Q91X60 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
Chrna2Q91X60 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36.09■■■■□ 3.37
Chrna2Q91X60 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC36.04■■■■□ 3.36
Chrna2Q91X60 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC36.02■■■■□ 3.36
Chrna2Q91X60 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC36.02■■■■□ 3.36
Chrna2Q91X60 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC35.99■■■■□ 3.35
Chrna2Q91X60 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC35.98■■■■□ 3.35
Chrna2Q91X60 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC35.97■■■■□ 3.35
Chrna2Q91X60 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC35.95■■■■□ 3.35
Chrna2Q91X60 Psd-208ENSMUST00000224556 2034 ntBASIC35.95■■■■□ 3.34
Chrna2Q91X60 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Chrna2Q91X60 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Chrna2Q91X60 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Chrna2Q91X60 Zfp131-205ENSMUST00000223812 663 ntBASIC35.88■■■■□ 3.33
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms