Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm25239-201ENSMUST00000174915 86 ntBASIC50,15■■■■■ 5,62
Col11a2Q64739 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC46,78■■■■■ 5,08
Col11a2Q64739 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC45,67■■■■■ 4,9
Col11a2Q64739 Gm24109-201ENSMUST00000175489 103 ntBASIC43,87■■■■■ 4,61
Col11a2Q64739 Gm15042-201ENSMUST00000120212 883 ntBASIC43,36■■■■■ 4,53
Col11a2Q64739 Gm15045-201ENSMUST00000117359 883 ntBASIC42,53■■■■■ 4,4
Col11a2Q64739 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC42,4■■■■■ 4,38
Col11a2Q64739 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC42,15■■■■■ 4,34
Col11a2Q64739 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC42,14■■■■■ 4,34
Col11a2Q64739 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC42,06■■■■■ 4,32
Col11a2Q64739 Gm23366-201ENSMUST00000175022 89 ntBASIC41,72■■■■■ 4,27
Col11a2Q64739 AC153911.1-202ENSMUST00000218534 1034 ntBASIC41■■■■■ 4,15
Col11a2Q64739 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC40,61■■■■■ 4,09
Col11a2Q64739 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC40,5■■■■■ 4,07
Col11a2Q64739 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC40,47■■■■■ 4,07
Col11a2Q64739 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC40,29■■■■■ 4,04
Col11a2Q64739 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40,22■■■■■ 4,03
Col11a2Q64739 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC40,19■■■■■ 4,02
Col11a2Q64739 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC39,96■■■■□ 3,99
Col11a2Q64739 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC39,84■■■■□ 3,97
Col11a2Q64739 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC39,77■■■■□ 3,96
Col11a2Q64739 Gm25238-201ENSMUST00000174914 89 ntBASIC39,74■■■■□ 3,95
Col11a2Q64739 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC39,7■■■■□ 3,95
Col11a2Q64739 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39,69■■■■□ 3,94
Col11a2Q64739 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC39,24■■■■□ 3,87
Col11a2Q64739 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC38,95■■■■□ 3,83
Col11a2Q64739 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC38,94■■■■□ 3,82
Col11a2Q64739 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC38,87■■■■□ 3,81
Col11a2Q64739 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38,86■■■■□ 3,81
Col11a2Q64739 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38,83■■■■□ 3,81
Col11a2Q64739 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC38,68■■■■□ 3,78
Col11a2Q64739 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC38,66■■■■□ 3,78
Col11a2Q64739 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38,61■■■■□ 3,77
Col11a2Q64739 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38,53■■■■□ 3,76
Col11a2Q64739 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC38,51■■■■□ 3,75
Col11a2Q64739 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC38,41■■■■□ 3,74
Col11a2Q64739 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC38,3■■■■□ 3,72
Col11a2Q64739 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC38,3■■■■□ 3,72
Col11a2Q64739 Gm25262-201ENSMUST00000174934 133 ntBASIC38,14■■■■□ 3,7
Col11a2Q64739 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC37,98■■■■□ 3,67
Col11a2Q64739 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC37,88■■■■□ 3,65
Col11a2Q64739 Gm27325-201ENSMUST00000175467 74 ntBASIC37,84■■■■□ 3,65
Col11a2Q64739 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC37,79■■■■□ 3,64
Col11a2Q64739 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC37,71■■■■□ 3,63
Col11a2Q64739 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC37,71■■■■□ 3,63
Col11a2Q64739 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37,65■■■■□ 3,62
Col11a2Q64739 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC37,61■■■■□ 3,61
Col11a2Q64739 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37,5■■■■□ 3,59
Col11a2Q64739 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC37,5■■■■□ 3,59
Col11a2Q64739 Rab21-202ENSMUST00000218831 843 ntBASIC37,47■■■■□ 3,59
Col11a2Q64739 Gm26115-201ENSMUST00000175605 87 ntBASIC37,44■■■■□ 3,58
Col11a2Q64739 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC37,4■■■■□ 3,58
Col11a2Q64739 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37,39■■■■□ 3,58
Col11a2Q64739 Gm8109-201ENSMUST00000194076 746 ntBASIC37,39■■■■□ 3,58
Col11a2Q64739 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC37,36■■■■□ 3,57
Col11a2Q64739 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC37,3■■■■□ 3,56
Col11a2Q64739 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC37,27■■■■□ 3,56
Col11a2Q64739 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC37,19■■■■□ 3,54
Col11a2Q64739 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC37,19■■■■□ 3,54
Col11a2Q64739 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC37,16■■■■□ 3,54
Col11a2Q64739 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC37,1■■■■□ 3,53
Col11a2Q64739 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC37,02■■■■□ 3,52
Col11a2Q64739 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC36,94■■■■□ 3,5
Col11a2Q64739 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC36,83■■■■□ 3,49
Col11a2Q64739 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC36,79■■■■□ 3,48
Col11a2Q64739 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC36,77■■■■□ 3,48
Col11a2Q64739 Psd-208ENSMUST00000224556 2034 ntBASIC36,73■■■■□ 3,47
Col11a2Q64739 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36,66■■■■□ 3,46
Col11a2Q64739 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC36,64■■■■□ 3,46
Col11a2Q64739 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36,56■■■■□ 3,44
Col11a2Q64739 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC36,55■■■■□ 3,44
Col11a2Q64739 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC36,51■■■■□ 3,43
Col11a2Q64739 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC36,47■■■■□ 3,43
Col11a2Q64739 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC36,43■■■■□ 3,42
Col11a2Q64739 Gm17082-201ENSMUST00000166043 1091 ntBASIC36,41■■■■□ 3,42
Col11a2Q64739 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC36,4■■■■□ 3,42
Col11a2Q64739 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36,39■■■■□ 3,42
Col11a2Q64739 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC36,34■■■■□ 3,41
Col11a2Q64739 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC36,31■■■■□ 3,4
Col11a2Q64739 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC36,27■■■■□ 3,4
Col11a2Q64739 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36,24■■■■□ 3,39
Col11a2Q64739 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC36,21■■■■□ 3,39
Col11a2Q64739 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC36,1■■■■□ 3,37
Col11a2Q64739 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC36,07■■■■□ 3,37
Col11a2Q64739 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC36,07■■■■□ 3,36
Col11a2Q64739 Gm24804-201ENSMUST00000174982 85 ntBASIC36,02■■■■□ 3,36
Col11a2Q64739 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC35,96■■■■□ 3,35
Col11a2Q64739 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC35,93■■■■□ 3,34
Col11a2Q64739 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC35,88■■■■□ 3,34
Col11a2Q64739 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC35,88■■■■□ 3,33
Col11a2Q64739 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35,87■■■■□ 3,33
Col11a2Q64739 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35,86■■■■□ 3,33
Col11a2Q64739 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC35,84■■■■□ 3,33
Col11a2Q64739 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC35,83■■■■□ 3,33
Col11a2Q64739 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35,82■■■■□ 3,33
Col11a2Q64739 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC35,77■■■■□ 3,32
Col11a2Q64739 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35,75■■■■□ 3,31
Col11a2Q64739 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC35,73■■■■□ 3,31
Col11a2Q64739 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC35,69■■■■□ 3,3
Col11a2Q64739 Gm27322-201ENSMUST00000184007 104 ntBASIC35,67■■■■□ 3,3
Retrieved 100 of 76,532 protein–RNA pairs in 11,8 ms