Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.25■■■■□ 3.07
HS3ST3A1Q9Y663 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.47■■■□□ 2.95
HS3ST3A1Q9Y663 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
HS3ST3A1Q9Y663 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
HS3ST3A1Q9Y663 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
HS3ST3A1Q9Y663 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.08■■■□□ 2.89
HS3ST3A1Q9Y663 AL356512.1-201ENST00000607453 1739 ntBASIC32.94■■■□□ 2.86
HS3ST3A1Q9Y663 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.92■■■□□ 2.86
HS3ST3A1Q9Y663 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
HS3ST3A1Q9Y663 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.09■■■□□ 2.73
HS3ST3A1Q9Y663 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.08■■■□□ 2.73
HS3ST3A1Q9Y663 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC31.97■■■□□ 2.71
HS3ST3A1Q9Y663 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.97■■■□□ 2.71
HS3ST3A1Q9Y663 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.88■■■□□ 2.69
HS3ST3A1Q9Y663 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.85■■■□□ 2.69
HS3ST3A1Q9Y663 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.79■■■□□ 2.68
HS3ST3A1Q9Y663 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
HS3ST3A1Q9Y663 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.6■■■□□ 2.65
HS3ST3A1Q9Y663 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
HS3ST3A1Q9Y663 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
HS3ST3A1Q9Y663 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
HS3ST3A1Q9Y663 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
HS3ST3A1Q9Y663 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
HS3ST3A1Q9Y663 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
HS3ST3A1Q9Y663 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
HS3ST3A1Q9Y663 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.97■■■□□ 2.55
HS3ST3A1Q9Y663 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.96■■■□□ 2.55
HS3ST3A1Q9Y663 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
HS3ST3A1Q9Y663 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
HS3ST3A1Q9Y663 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
HS3ST3A1Q9Y663 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
HS3ST3A1Q9Y663 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.81■■■□□ 2.52
HS3ST3A1Q9Y663 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
HS3ST3A1Q9Y663 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
HS3ST3A1Q9Y663 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
HS3ST3A1Q9Y663 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.5■■■□□ 2.47
HS3ST3A1Q9Y663 AC015813.7-201ENST00000623294 581 ntBASIC30.46■■■□□ 2.47
HS3ST3A1Q9Y663 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
HS3ST3A1Q9Y663 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
HS3ST3A1Q9Y663 AC006077.2-201ENST00000623591 457 ntBASIC30.34■■■□□ 2.45
HS3ST3A1Q9Y663 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.3■■■□□ 2.44
HS3ST3A1Q9Y663 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.3■■■□□ 2.44
HS3ST3A1Q9Y663 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
HS3ST3A1Q9Y663 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
HS3ST3A1Q9Y663 ZNRF2P1-201ENST00000441407 443 ntBASIC30.24■■■□□ 2.43
HS3ST3A1Q9Y663 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
HS3ST3A1Q9Y663 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
HS3ST3A1Q9Y663 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
HS3ST3A1Q9Y663 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.91■■■□□ 2.38
HS3ST3A1Q9Y663 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.9■■■□□ 2.38
HS3ST3A1Q9Y663 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
HS3ST3A1Q9Y663 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.86■■■□□ 2.37
HS3ST3A1Q9Y663 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
HS3ST3A1Q9Y663 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.79■■■□□ 2.36
HS3ST3A1Q9Y663 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.78■■■□□ 2.36
HS3ST3A1Q9Y663 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
HS3ST3A1Q9Y663 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
HS3ST3A1Q9Y663 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.63■■■□□ 2.33
HS3ST3A1Q9Y663 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
HS3ST3A1Q9Y663 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
HS3ST3A1Q9Y663 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
HS3ST3A1Q9Y663 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.5■■■□□ 2.31
HS3ST3A1Q9Y663 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
HS3ST3A1Q9Y663 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.49■■■□□ 2.31
HS3ST3A1Q9Y663 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
HS3ST3A1Q9Y663 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
HS3ST3A1Q9Y663 AP002365.1-201ENST00000603448 772 ntBASIC29.48■■■□□ 2.31
HS3ST3A1Q9Y663 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
HS3ST3A1Q9Y663 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
HS3ST3A1Q9Y663 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
HS3ST3A1Q9Y663 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
HS3ST3A1Q9Y663 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.33■■■□□ 2.29
HS3ST3A1Q9Y663 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.32■■■□□ 2.28
HS3ST3A1Q9Y663 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.31■■■□□ 2.28
HS3ST3A1Q9Y663 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.3■■■□□ 2.28
HS3ST3A1Q9Y663 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.26■■■□□ 2.27
HS3ST3A1Q9Y663 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.24■■■□□ 2.27
HS3ST3A1Q9Y663 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
HS3ST3A1Q9Y663 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.21■■■□□ 2.27
HS3ST3A1Q9Y663 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
HS3ST3A1Q9Y663 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
HS3ST3A1Q9Y663 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
HS3ST3A1Q9Y663 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.14■■■□□ 2.25
HS3ST3A1Q9Y663 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
HS3ST3A1Q9Y663 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
HS3ST3A1Q9Y663 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.12■■■□□ 2.25
HS3ST3A1Q9Y663 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.09■■■□□ 2.25
HS3ST3A1Q9Y663 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.09■■■□□ 2.25
HS3ST3A1Q9Y663 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.05■■■□□ 2.24
HS3ST3A1Q9Y663 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.04■■■□□ 2.24
HS3ST3A1Q9Y663 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
HS3ST3A1Q9Y663 DYNLL1-208ENST00000550178 581 ntBASIC29.04■■■□□ 2.24
HS3ST3A1Q9Y663 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
HS3ST3A1Q9Y663 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.99■■■□□ 2.23
HS3ST3A1Q9Y663 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
HS3ST3A1Q9Y663 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.98■■■□□ 2.23
HS3ST3A1Q9Y663 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
HS3ST3A1Q9Y663 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
HS3ST3A1Q9Y663 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.92■■■□□ 2.22
HS3ST3A1Q9Y663 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms