Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.61■■■■□ 3.61
PCDHB7Q9Y5E2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.98■■■■□ 3.51
PCDHB7Q9Y5E2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
PCDHB7Q9Y5E2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.42■■■■□ 3.42
PCDHB7Q9Y5E2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
PCDHB7Q9Y5E2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
PCDHB7Q9Y5E2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.24■■■■□ 3.39
PCDHB7Q9Y5E2 AL356512.1-201ENST00000607453 1739 ntBASIC36.02■■■■□ 3.36
PCDHB7Q9Y5E2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.49■■■■□ 3.27
PCDHB7Q9Y5E2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.29■■■■□ 3.24
PCDHB7Q9Y5E2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC35.22■■■■□ 3.23
PCDHB7Q9Y5E2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC35.16■■■■□ 3.22
PCDHB7Q9Y5E2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.15■■■■□ 3.22
PCDHB7Q9Y5E2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC35.1■■■■□ 3.21
PCDHB7Q9Y5E2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.98■■■■□ 3.19
PCDHB7Q9Y5E2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
PCDHB7Q9Y5E2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.88■■■■□ 3.17
PCDHB7Q9Y5E2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.86■■■■□ 3.17
PCDHB7Q9Y5E2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
PCDHB7Q9Y5E2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.59■■■■□ 3.13
PCDHB7Q9Y5E2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.44■■■■□ 3.1
PCDHB7Q9Y5E2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
PCDHB7Q9Y5E2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.41■■■■□ 3.1
PCDHB7Q9Y5E2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
PCDHB7Q9Y5E2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
PCDHB7Q9Y5E2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
PCDHB7Q9Y5E2 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC34.27■■■■□ 3.08
PCDHB7Q9Y5E2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC34.25■■■■□ 3.07
PCDHB7Q9Y5E2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
PCDHB7Q9Y5E2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC34.07■■■■□ 3.04
PCDHB7Q9Y5E2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
PCDHB7Q9Y5E2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
PCDHB7Q9Y5E2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.64■■■□□ 2.98
PCDHB7Q9Y5E2 AC015813.7-201ENST00000623294 581 ntBASIC33.59■■■□□ 2.97
PCDHB7Q9Y5E2 AC006077.2-201ENST00000623591 457 ntBASIC33.59■■■□□ 2.97
PCDHB7Q9Y5E2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.58■■■□□ 2.97
PCDHB7Q9Y5E2 ZNRF2P1-201ENST00000441407 443 ntBASIC33.54■■■□□ 2.96
PCDHB7Q9Y5E2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.52■■■□□ 2.96
PCDHB7Q9Y5E2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.5■■■□□ 2.95
PCDHB7Q9Y5E2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.48■■■□□ 2.95
PCDHB7Q9Y5E2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
PCDHB7Q9Y5E2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
PCDHB7Q9Y5E2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
PCDHB7Q9Y5E2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
PCDHB7Q9Y5E2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.22■■■□□ 2.91
PCDHB7Q9Y5E2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
PCDHB7Q9Y5E2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.18■■■□□ 2.9
PCDHB7Q9Y5E2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
PCDHB7Q9Y5E2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
PCDHB7Q9Y5E2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.97■■■□□ 2.87
PCDHB7Q9Y5E2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
PCDHB7Q9Y5E2 AP002365.1-201ENST00000603448 772 ntBASIC32.71■■■□□ 2.83
PCDHB7Q9Y5E2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
PCDHB7Q9Y5E2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
PCDHB7Q9Y5E2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
PCDHB7Q9Y5E2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.58■■■□□ 2.81
PCDHB7Q9Y5E2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
PCDHB7Q9Y5E2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
PCDHB7Q9Y5E2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.5■■■□□ 2.79
PCDHB7Q9Y5E2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.49■■■□□ 2.79
PCDHB7Q9Y5E2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.49■■■□□ 2.79
PCDHB7Q9Y5E2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.47■■■□□ 2.79
PCDHB7Q9Y5E2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
PCDHB7Q9Y5E2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.46■■■□□ 2.79
PCDHB7Q9Y5E2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
PCDHB7Q9Y5E2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.42■■■□□ 2.78
PCDHB7Q9Y5E2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
PCDHB7Q9Y5E2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.4■■■□□ 2.78
PCDHB7Q9Y5E2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.39■■■□□ 2.78
PCDHB7Q9Y5E2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.39■■■□□ 2.78
PCDHB7Q9Y5E2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
PCDHB7Q9Y5E2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.36■■■□□ 2.77
PCDHB7Q9Y5E2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.35■■■□□ 2.77
PCDHB7Q9Y5E2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.35■■■□□ 2.77
PCDHB7Q9Y5E2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.33■■■□□ 2.77
PCDHB7Q9Y5E2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
PCDHB7Q9Y5E2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.3■■■□□ 2.76
PCDHB7Q9Y5E2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
PCDHB7Q9Y5E2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
PCDHB7Q9Y5E2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.75
PCDHB7Q9Y5E2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC32.22■■■□□ 2.75
PCDHB7Q9Y5E2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.22■■■□□ 2.75
PCDHB7Q9Y5E2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.16■■■□□ 2.74
PCDHB7Q9Y5E2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.16■■■□□ 2.74
PCDHB7Q9Y5E2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
PCDHB7Q9Y5E2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
PCDHB7Q9Y5E2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
PCDHB7Q9Y5E2 DYNLL1-208ENST00000550178 581 ntBASIC32.11■■■□□ 2.73
PCDHB7Q9Y5E2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
PCDHB7Q9Y5E2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
PCDHB7Q9Y5E2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.03■■■□□ 2.72
PCDHB7Q9Y5E2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
PCDHB7Q9Y5E2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.99■■■□□ 2.71
PCDHB7Q9Y5E2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PCDHB7Q9Y5E2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
PCDHB7Q9Y5E2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
PCDHB7Q9Y5E2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PCDHB7Q9Y5E2 AL031258.1-201ENST00000623562 325 ntBASIC31.87■■■□□ 2.69
PCDHB7Q9Y5E2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PCDHB7Q9Y5E2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.83■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms