Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.45■■■■□ 3.43
YIPF1Q9Y548 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.63■■■■□ 3.29
YIPF1Q9Y548 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
YIPF1Q9Y548 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
YIPF1Q9Y548 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
YIPF1Q9Y548 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.21■■■■□ 3.23
YIPF1Q9Y548 AL356512.1-201ENST00000607453 1739 ntBASIC35.06■■■■□ 3.2
YIPF1Q9Y548 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.03■■■■□ 3.2
YIPF1Q9Y548 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.19■■■■□ 3.06
YIPF1Q9Y548 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.18■■■■□ 3.06
YIPF1Q9Y548 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.1■■■■□ 3.05
YIPF1Q9Y548 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.08■■■■□ 3.05
YIPF1Q9Y548 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.03■■■■□ 3.04
YIPF1Q9Y548 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34■■■■□ 3.03
YIPF1Q9Y548 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34■■■■□ 3.03
YIPF1Q9Y548 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.83■■■■□ 3.01
YIPF1Q9Y548 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.76■■■□□ 2.99
YIPF1Q9Y548 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.62■■■□□ 2.97
YIPF1Q9Y548 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.57■■■□□ 2.96
YIPF1Q9Y548 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
YIPF1Q9Y548 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
YIPF1Q9Y548 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.41■■■□□ 2.94
YIPF1Q9Y548 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
YIPF1Q9Y548 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
YIPF1Q9Y548 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
YIPF1Q9Y548 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
YIPF1Q9Y548 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.99■■■□□ 2.87
YIPF1Q9Y548 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.95■■■□□ 2.86
YIPF1Q9Y548 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
YIPF1Q9Y548 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
YIPF1Q9Y548 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.84■■■□□ 2.85
YIPF1Q9Y548 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.83■■■□□ 2.85
YIPF1Q9Y548 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.8
YIPF1Q9Y548 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
YIPF1Q9Y548 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.5■■■□□ 2.79
YIPF1Q9Y548 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
YIPF1Q9Y548 AC015813.7-201ENST00000623294 581 ntBASIC32.37■■■□□ 2.77
YIPF1Q9Y548 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
YIPF1Q9Y548 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
YIPF1Q9Y548 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.35■■■□□ 2.77
YIPF1Q9Y548 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.27■■■□□ 2.76
YIPF1Q9Y548 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.26■■■□□ 2.75
YIPF1Q9Y548 AC006077.2-201ENST00000623591 457 ntBASIC32.25■■■□□ 2.75
YIPF1Q9Y548 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.75
YIPF1Q9Y548 ZNRF2P1-201ENST00000441407 443 ntBASIC32.2■■■□□ 2.75
YIPF1Q9Y548 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
YIPF1Q9Y548 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
YIPF1Q9Y548 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
YIPF1Q9Y548 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.89■■■□□ 2.69
YIPF1Q9Y548 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
YIPF1Q9Y548 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.84■■■□□ 2.69
YIPF1Q9Y548 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.81■■■□□ 2.68
YIPF1Q9Y548 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
YIPF1Q9Y548 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.78■■■□□ 2.68
YIPF1Q9Y548 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
YIPF1Q9Y548 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.66■■■□□ 2.66
YIPF1Q9Y548 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
YIPF1Q9Y548 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
YIPF1Q9Y548 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
YIPF1Q9Y548 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
YIPF1Q9Y548 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
YIPF1Q9Y548 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
YIPF1Q9Y548 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.43■■■□□ 2.62
YIPF1Q9Y548 AP002365.1-201ENST00000603448 772 ntBASIC31.42■■■□□ 2.62
YIPF1Q9Y548 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.42■■■□□ 2.62
YIPF1Q9Y548 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
YIPF1Q9Y548 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
YIPF1Q9Y548 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
YIPF1Q9Y548 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
YIPF1Q9Y548 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.29■■■□□ 2.6
YIPF1Q9Y548 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
YIPF1Q9Y548 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.26■■■□□ 2.59
YIPF1Q9Y548 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.26■■■□□ 2.59
YIPF1Q9Y548 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
YIPF1Q9Y548 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.19■■■□□ 2.58
YIPF1Q9Y548 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
YIPF1Q9Y548 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.16■■■□□ 2.58
YIPF1Q9Y548 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.14■■■□□ 2.58
YIPF1Q9Y548 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.13■■■□□ 2.57
YIPF1Q9Y548 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
YIPF1Q9Y548 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.12■■■□□ 2.57
YIPF1Q9Y548 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
YIPF1Q9Y548 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.03■■■□□ 2.56
YIPF1Q9Y548 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
YIPF1Q9Y548 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.56
YIPF1Q9Y548 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
YIPF1Q9Y548 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
YIPF1Q9Y548 DYNLL1-208ENST00000550178 581 ntBASIC30.97■■■□□ 2.55
YIPF1Q9Y548 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
YIPF1Q9Y548 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.96■■■□□ 2.55
YIPF1Q9Y548 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
YIPF1Q9Y548 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.93■■■□□ 2.54
YIPF1Q9Y548 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
YIPF1Q9Y548 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.91■■■□□ 2.54
YIPF1Q9Y548 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
YIPF1Q9Y548 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.88■■■□□ 2.53
YIPF1Q9Y548 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
YIPF1Q9Y548 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
YIPF1Q9Y548 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
YIPF1Q9Y548 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms