Protein–RNA interactions for Protein: Q9Y543

HES2, Transcription factor HES-2, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES2Q9Y543 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.56■■■■□ 3.6
HES2Q9Y543 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
HES2Q9Y543 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.49■■■■□ 3.43
HES2Q9Y543 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
HES2Q9Y543 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.35■■■■□ 3.41
HES2Q9Y543 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
HES2Q9Y543 AL356512.1-201ENST00000607453 1739 ntBASIC36.24■■■■□ 3.39
HES2Q9Y543 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.88■■■■□ 3.33
HES2Q9Y543 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.32■■■■□ 3.24
HES2Q9Y543 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.28■■■■□ 3.24
HES2Q9Y543 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.07■■■■□ 3.2
HES2Q9Y543 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.06■■■■□ 3.2
HES2Q9Y543 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC35.04■■■■□ 3.2
HES2Q9Y543 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC35.02■■■■□ 3.2
HES2Q9Y543 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.9■■■■□ 3.18
HES2Q9Y543 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.83■■■■□ 3.17
HES2Q9Y543 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.79■■■■□ 3.16
HES2Q9Y543 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.74■■■■□ 3.15
HES2Q9Y543 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
HES2Q9Y543 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.43■■■■□ 3.1
HES2Q9Y543 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
HES2Q9Y543 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.35■■■■□ 3.09
HES2Q9Y543 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.34■■■■□ 3.09
HES2Q9Y543 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
HES2Q9Y543 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
HES2Q9Y543 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.98■■■■□ 3.03
HES2Q9Y543 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
HES2Q9Y543 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
HES2Q9Y543 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.84■■■■□ 3.01
HES2Q9Y543 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.76■■■□□ 2.99
HES2Q9Y543 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.71■■■□□ 2.99
HES2Q9Y543 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
HES2Q9Y543 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.61■■■□□ 2.97
HES2Q9Y543 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
HES2Q9Y543 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.53■■■□□ 2.96
HES2Q9Y543 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.43■■■□□ 2.94
HES2Q9Y543 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
HES2Q9Y543 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
HES2Q9Y543 AC015813.7-201ENST00000623294 581 ntBASIC33.26■■■□□ 2.91
HES2Q9Y543 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.17■■■□□ 2.9
HES2Q9Y543 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.13■■■□□ 2.89
HES2Q9Y543 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.13■■■□□ 2.89
HES2Q9Y543 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.12■■■□□ 2.89
HES2Q9Y543 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
HES2Q9Y543 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.04■■■□□ 2.88
HES2Q9Y543 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.02■■■□□ 2.88
HES2Q9Y543 AC006077.2-201ENST00000623591 457 ntBASIC33■■■□□ 2.87
HES2Q9Y543 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
HES2Q9Y543 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.97■■■□□ 2.87
HES2Q9Y543 ZNRF2P1-201ENST00000441407 443 ntBASIC32.93■■■□□ 2.86
HES2Q9Y543 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.83■■■□□ 2.85
HES2Q9Y543 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.8■■■□□ 2.84
HES2Q9Y543 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.8■■■□□ 2.84
HES2Q9Y543 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
HES2Q9Y543 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.76■■■□□ 2.83
HES2Q9Y543 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
HES2Q9Y543 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
HES2Q9Y543 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
HES2Q9Y543 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.63■■■□□ 2.81
HES2Q9Y543 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.61■■■□□ 2.81
HES2Q9Y543 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
HES2Q9Y543 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
HES2Q9Y543 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
HES2Q9Y543 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
HES2Q9Y543 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
HES2Q9Y543 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
HES2Q9Y543 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
HES2Q9Y543 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.25■■■□□ 2.75
HES2Q9Y543 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
HES2Q9Y543 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
HES2Q9Y543 AP002365.1-201ENST00000603448 772 ntBASIC32.16■■■□□ 2.74
HES2Q9Y543 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.73
HES2Q9Y543 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
HES2Q9Y543 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.08■■■□□ 2.73
HES2Q9Y543 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.04■■■□□ 2.72
HES2Q9Y543 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.02■■■□□ 2.72
HES2Q9Y543 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
HES2Q9Y543 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.99■■■□□ 2.71
HES2Q9Y543 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.99■■■□□ 2.71
HES2Q9Y543 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.99■■■□□ 2.71
HES2Q9Y543 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
HES2Q9Y543 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
HES2Q9Y543 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.95■■■□□ 2.71
HES2Q9Y543 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.7
HES2Q9Y543 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.9■■■□□ 2.7
HES2Q9Y543 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
HES2Q9Y543 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.89■■■□□ 2.7
HES2Q9Y543 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
HES2Q9Y543 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
HES2Q9Y543 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
HES2Q9Y543 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
HES2Q9Y543 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
HES2Q9Y543 DYNLL1-208ENST00000550178 581 ntBASIC31.82■■■□□ 2.68
HES2Q9Y543 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
HES2Q9Y543 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
HES2Q9Y543 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.77■■■□□ 2.68
HES2Q9Y543 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.76■■■□□ 2.67
HES2Q9Y543 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.74■■■□□ 2.67
HES2Q9Y543 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.73■■■□□ 2.67
HES2Q9Y543 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms