Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.66■■■■□ 3.14
NCKAP1Q9Y2A7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.94■■■■□ 3.02
NCKAP1Q9Y2A7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
NCKAP1Q9Y2A7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
NCKAP1Q9Y2A7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
NCKAP1Q9Y2A7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.48■■■□□ 2.95
NCKAP1Q9Y2A7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.39■■■□□ 2.94
NCKAP1Q9Y2A7 AL356512.1-201ENST00000607453 1739 ntBASIC33.31■■■□□ 2.92
NCKAP1Q9Y2A7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.59■■■□□ 2.81
NCKAP1Q9Y2A7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.49■■■□□ 2.79
NCKAP1Q9Y2A7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.42■■■□□ 2.78
NCKAP1Q9Y2A7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.41■■■□□ 2.78
NCKAP1Q9Y2A7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.39■■■□□ 2.78
NCKAP1Q9Y2A7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.38■■■□□ 2.77
NCKAP1Q9Y2A7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.31■■■□□ 2.76
NCKAP1Q9Y2A7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.09■■■□□ 2.73
NCKAP1Q9Y2A7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.08■■■□□ 2.73
NCKAP1Q9Y2A7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.01■■■□□ 2.71
NCKAP1Q9Y2A7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.95■■■□□ 2.7
NCKAP1Q9Y2A7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
NCKAP1Q9Y2A7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NCKAP1Q9Y2A7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NCKAP1Q9Y2A7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
NCKAP1Q9Y2A7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
NCKAP1Q9Y2A7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
NCKAP1Q9Y2A7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
NCKAP1Q9Y2A7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.47■■■□□ 2.63
NCKAP1Q9Y2A7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NCKAP1Q9Y2A7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NCKAP1Q9Y2A7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NCKAP1Q9Y2A7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.24■■■□□ 2.59
NCKAP1Q9Y2A7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.22■■■□□ 2.59
NCKAP1Q9Y2A7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NCKAP1Q9Y2A7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
NCKAP1Q9Y2A7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
NCKAP1Q9Y2A7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.88■■■□□ 2.53
NCKAP1Q9Y2A7 AC015813.7-201ENST00000623294 581 ntBASIC30.85■■■□□ 2.53
NCKAP1Q9Y2A7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.81■■■□□ 2.52
NCKAP1Q9Y2A7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
NCKAP1Q9Y2A7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.79■■■□□ 2.52
NCKAP1Q9Y2A7 AC006077.2-201ENST00000623591 457 ntBASIC30.79■■■□□ 2.52
NCKAP1Q9Y2A7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
NCKAP1Q9Y2A7 ZNRF2P1-201ENST00000441407 443 ntBASIC30.71■■■□□ 2.51
NCKAP1Q9Y2A7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
NCKAP1Q9Y2A7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
NCKAP1Q9Y2A7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
NCKAP1Q9Y2A7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
NCKAP1Q9Y2A7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.34■■■□□ 2.45
NCKAP1Q9Y2A7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NCKAP1Q9Y2A7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
NCKAP1Q9Y2A7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
NCKAP1Q9Y2A7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
NCKAP1Q9Y2A7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
NCKAP1Q9Y2A7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.17■■■□□ 2.42
NCKAP1Q9Y2A7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.14■■■□□ 2.41
NCKAP1Q9Y2A7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.13■■■□□ 2.41
NCKAP1Q9Y2A7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.07■■■□□ 2.4
NCKAP1Q9Y2A7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
NCKAP1Q9Y2A7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
NCKAP1Q9Y2A7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
NCKAP1Q9Y2A7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
NCKAP1Q9Y2A7 AP002365.1-201ENST00000603448 772 ntBASIC29.95■■■□□ 2.39
NCKAP1Q9Y2A7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
NCKAP1Q9Y2A7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
NCKAP1Q9Y2A7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
NCKAP1Q9Y2A7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
NCKAP1Q9Y2A7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
NCKAP1Q9Y2A7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.88■■■□□ 2.37
NCKAP1Q9Y2A7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
NCKAP1Q9Y2A7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
NCKAP1Q9Y2A7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.8■■■□□ 2.36
NCKAP1Q9Y2A7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.73■■■□□ 2.35
NCKAP1Q9Y2A7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.73■■■□□ 2.35
NCKAP1Q9Y2A7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.72■■■□□ 2.35
NCKAP1Q9Y2A7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.71■■■□□ 2.35
NCKAP1Q9Y2A7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
NCKAP1Q9Y2A7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
NCKAP1Q9Y2A7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.7■■■□□ 2.35
NCKAP1Q9Y2A7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.69■■■□□ 2.34
NCKAP1Q9Y2A7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.66■■■□□ 2.34
NCKAP1Q9Y2A7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.65■■■□□ 2.34
NCKAP1Q9Y2A7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
NCKAP1Q9Y2A7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.58■■■□□ 2.33
NCKAP1Q9Y2A7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.58■■■□□ 2.33
NCKAP1Q9Y2A7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
NCKAP1Q9Y2A7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.51■■■□□ 2.31
NCKAP1Q9Y2A7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
NCKAP1Q9Y2A7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
NCKAP1Q9Y2A7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
NCKAP1Q9Y2A7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
NCKAP1Q9Y2A7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
NCKAP1Q9Y2A7 DYNLL1-208ENST00000550178 581 ntBASIC29.46■■■□□ 2.31
NCKAP1Q9Y2A7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.31
NCKAP1Q9Y2A7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.43■■■□□ 2.3
NCKAP1Q9Y2A7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.43■■■□□ 2.3
NCKAP1Q9Y2A7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
NCKAP1Q9Y2A7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
NCKAP1Q9Y2A7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
NCKAP1Q9Y2A7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
NCKAP1Q9Y2A7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms