Protein–RNA interactions for Protein: Q9NV58

RNF19A, E3 ubiquitin-protein ligase RNF19A, humanhuman

Predictions only

Length 838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF19AQ9NV58 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.55■■■■□ 3.6
RNF19AQ9NV58 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.82■■■■□ 3.48
RNF19AQ9NV58 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
RNF19AQ9NV58 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
RNF19AQ9NV58 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
RNF19AQ9NV58 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.26■■■■□ 3.4
RNF19AQ9NV58 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.19■■■■□ 3.38
RNF19AQ9NV58 AL356512.1-201ENST00000607453 1739 ntBASIC36.08■■■■□ 3.37
RNF19AQ9NV58 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.31■■■■□ 3.24
RNF19AQ9NV58 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC35.18■■■■□ 3.22
RNF19AQ9NV58 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.15■■■■□ 3.22
RNF19AQ9NV58 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC35.09■■■■□ 3.21
RNF19AQ9NV58 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.07■■■■□ 3.2
RNF19AQ9NV58 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.03■■■■□ 3.2
RNF19AQ9NV58 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.96■■■■□ 3.19
RNF19AQ9NV58 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.9■■■■□ 3.18
RNF19AQ9NV58 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.8■■■■□ 3.16
RNF19AQ9NV58 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.76■■■■□ 3.16
RNF19AQ9NV58 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
RNF19AQ9NV58 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.62■■■■□ 3.13
RNF19AQ9NV58 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
RNF19AQ9NV58 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
RNF19AQ9NV58 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.42■■■■□ 3.1
RNF19AQ9NV58 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
RNF19AQ9NV58 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.19■■■■□ 3.06
RNF19AQ9NV58 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
RNF19AQ9NV58 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
RNF19AQ9NV58 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC34.06■■■■□ 3.04
RNF19AQ9NV58 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
RNF19AQ9NV58 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.98■■■■□ 3.03
RNF19AQ9NV58 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.85■■■■□ 3.01
RNF19AQ9NV58 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
RNF19AQ9NV58 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
RNF19AQ9NV58 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.57■■■□□ 2.96
RNF19AQ9NV58 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
RNF19AQ9NV58 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
RNF19AQ9NV58 AC015813.7-201ENST00000623294 581 ntBASIC33.48■■■□□ 2.95
RNF19AQ9NV58 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.45■■■□□ 2.95
RNF19AQ9NV58 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.43■■■□□ 2.94
RNF19AQ9NV58 AC006077.2-201ENST00000623591 457 ntBASIC33.39■■■□□ 2.94
RNF19AQ9NV58 ZNRF2P1-201ENST00000441407 443 ntBASIC33.36■■■□□ 2.93
RNF19AQ9NV58 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.27■■■□□ 2.92
RNF19AQ9NV58 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
RNF19AQ9NV58 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.17■■■□□ 2.9
RNF19AQ9NV58 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.17■■■□□ 2.9
RNF19AQ9NV58 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.01■■■□□ 2.88
RNF19AQ9NV58 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.87
RNF19AQ9NV58 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
RNF19AQ9NV58 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.99■■■□□ 2.87
RNF19AQ9NV58 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
RNF19AQ9NV58 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
RNF19AQ9NV58 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.93■■■□□ 2.86
RNF19AQ9NV58 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.84■■■□□ 2.85
RNF19AQ9NV58 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
RNF19AQ9NV58 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.7■■■□□ 2.82
RNF19AQ9NV58 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
RNF19AQ9NV58 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.63■■■□□ 2.81
RNF19AQ9NV58 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
RNF19AQ9NV58 AP002365.1-201ENST00000603448 772 ntBASIC32.55■■■□□ 2.8
RNF19AQ9NV58 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.55■■■□□ 2.8
RNF19AQ9NV58 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.52■■■□□ 2.8
RNF19AQ9NV58 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.52■■■□□ 2.8
RNF19AQ9NV58 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.46■■■□□ 2.79
RNF19AQ9NV58 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
RNF19AQ9NV58 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.43■■■□□ 2.78
RNF19AQ9NV58 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RNF19AQ9NV58 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.4■■■□□ 2.78
RNF19AQ9NV58 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.39■■■□□ 2.78
RNF19AQ9NV58 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
RNF19AQ9NV58 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
RNF19AQ9NV58 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
RNF19AQ9NV58 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.3■■■□□ 2.76
RNF19AQ9NV58 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
RNF19AQ9NV58 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.26■■■□□ 2.75
RNF19AQ9NV58 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.26■■■□□ 2.75
RNF19AQ9NV58 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.24■■■□□ 2.75
RNF19AQ9NV58 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
RNF19AQ9NV58 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
RNF19AQ9NV58 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
RNF19AQ9NV58 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.21■■■□□ 2.75
RNF19AQ9NV58 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
RNF19AQ9NV58 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC32.16■■■□□ 2.74
RNF19AQ9NV58 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.12■■■□□ 2.73
RNF19AQ9NV58 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC32.11■■■□□ 2.73
RNF19AQ9NV58 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
RNF19AQ9NV58 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
RNF19AQ9NV58 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
RNF19AQ9NV58 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
RNF19AQ9NV58 DYNLL1-208ENST00000550178 581 ntBASIC32.04■■■□□ 2.72
RNF19AQ9NV58 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.02■■■□□ 2.72
RNF19AQ9NV58 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
RNF19AQ9NV58 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.99■■■□□ 2.71
RNF19AQ9NV58 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.98■■■□□ 2.71
RNF19AQ9NV58 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
RNF19AQ9NV58 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
RNF19AQ9NV58 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
RNF19AQ9NV58 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.88■■■□□ 2.69
RNF19AQ9NV58 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RNF19AQ9NV58 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
RNF19AQ9NV58 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms