Protein–RNA interactions for Protein: Q9NPG3

UBN1, Ubinuclein-1, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBN1Q9NPG3 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.44■■■■□ 3.58
UBN1Q9NPG3 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.61■■■■□ 3.45
UBN1Q9NPG3 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
UBN1Q9NPG3 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
UBN1Q9NPG3 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
UBN1Q9NPG3 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.18■■■■□ 3.38
UBN1Q9NPG3 AL356512.1-201ENST00000607453 1739 ntBASIC36.02■■■■□ 3.36
UBN1Q9NPG3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.97■■■■□ 3.35
UBN1Q9NPG3 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.12■■■■□ 3.21
UBN1Q9NPG3 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.12■■■■□ 3.21
UBN1Q9NPG3 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.11■■■■□ 3.21
UBN1Q9NPG3 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.97■■■■□ 3.19
UBN1Q9NPG3 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.95■■■■□ 3.19
UBN1Q9NPG3 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.89■■■■□ 3.18
UBN1Q9NPG3 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.84■■■■□ 3.17
UBN1Q9NPG3 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.76■■■■□ 3.16
UBN1Q9NPG3 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.62■■■■□ 3.13
UBN1Q9NPG3 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.58■■■■□ 3.13
UBN1Q9NPG3 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
UBN1Q9NPG3 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.39■■■■□ 3.1
UBN1Q9NPG3 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
UBN1Q9NPG3 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.26■■■■□ 3.08
UBN1Q9NPG3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
UBN1Q9NPG3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
UBN1Q9NPG3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.95■■■■□ 3.03
UBN1Q9NPG3 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.88■■■■□ 3.01
UBN1Q9NPG3 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.85■■■■□ 3.01
UBN1Q9NPG3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
UBN1Q9NPG3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.82■■■■□ 3
UBN1Q9NPG3 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
UBN1Q9NPG3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
UBN1Q9NPG3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.65■■■□□ 2.98
UBN1Q9NPG3 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.6■■■□□ 2.97
UBN1Q9NPG3 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
UBN1Q9NPG3 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
UBN1Q9NPG3 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.38■■■□□ 2.93
UBN1Q9NPG3 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.35■■■□□ 2.93
UBN1Q9NPG3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
UBN1Q9NPG3 AC015813.7-201ENST00000623294 581 ntBASIC33.27■■■□□ 2.92
UBN1Q9NPG3 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
UBN1Q9NPG3 AC006077.2-201ENST00000623591 457 ntBASIC33.17■■■□□ 2.9
UBN1Q9NPG3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.14■■■□□ 2.9
UBN1Q9NPG3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.14■■■□□ 2.9
UBN1Q9NPG3 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
UBN1Q9NPG3 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.08■■■□□ 2.89
UBN1Q9NPG3 ZNRF2P1-201ENST00000441407 443 ntBASIC33.05■■■□□ 2.88
UBN1Q9NPG3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.98■■■□□ 2.87
UBN1Q9NPG3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
UBN1Q9NPG3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
UBN1Q9NPG3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
UBN1Q9NPG3 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.71■■■□□ 2.83
UBN1Q9NPG3 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.71■■■□□ 2.83
UBN1Q9NPG3 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.67■■■□□ 2.82
UBN1Q9NPG3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
UBN1Q9NPG3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
UBN1Q9NPG3 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.58■■■□□ 2.81
UBN1Q9NPG3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.57■■■□□ 2.8
UBN1Q9NPG3 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.54■■■□□ 2.8
UBN1Q9NPG3 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.49■■■□□ 2.79
UBN1Q9NPG3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
UBN1Q9NPG3 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
UBN1Q9NPG3 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
UBN1Q9NPG3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
UBN1Q9NPG3 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
UBN1Q9NPG3 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
UBN1Q9NPG3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
UBN1Q9NPG3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
UBN1Q9NPG3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
UBN1Q9NPG3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.26■■■□□ 2.75
UBN1Q9NPG3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.24■■■□□ 2.75
UBN1Q9NPG3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.22■■■□□ 2.75
UBN1Q9NPG3 AP002365.1-201ENST00000603448 772 ntBASIC32.22■■■□□ 2.75
UBN1Q9NPG3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
UBN1Q9NPG3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
UBN1Q9NPG3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
UBN1Q9NPG3 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
UBN1Q9NPG3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
UBN1Q9NPG3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.05■■■□□ 2.72
UBN1Q9NPG3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.04■■■□□ 2.72
UBN1Q9NPG3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.02■■■□□ 2.72
UBN1Q9NPG3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC32.01■■■□□ 2.71
UBN1Q9NPG3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.01■■■□□ 2.71
UBN1Q9NPG3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
UBN1Q9NPG3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.93■■■□□ 2.7
UBN1Q9NPG3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.92■■■□□ 2.7
UBN1Q9NPG3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
UBN1Q9NPG3 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
UBN1Q9NPG3 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.89■■■□□ 2.7
UBN1Q9NPG3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
UBN1Q9NPG3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
UBN1Q9NPG3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
UBN1Q9NPG3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.84■■■□□ 2.69
UBN1Q9NPG3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
UBN1Q9NPG3 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
UBN1Q9NPG3 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.8■■■□□ 2.68
UBN1Q9NPG3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.8■■■□□ 2.68
UBN1Q9NPG3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.75■■■□□ 2.67
UBN1Q9NPG3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
UBN1Q9NPG3 DYNLL1-208ENST00000550178 581 ntBASIC31.74■■■□□ 2.67
UBN1Q9NPG3 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms