Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.91■■■■□ 3.18
SP110Q9HB58 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
SP110Q9HB58 AL356512.1-201ENST00000607453 1739 ntBASIC34.02■■■■□ 3.04
SP110Q9HB58 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.99■■■■□ 3.03
SP110Q9HB58 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3.01
SP110Q9HB58 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
SP110Q9HB58 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.53■■■□□ 2.96
SP110Q9HB58 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.45■■■□□ 2.95
SP110Q9HB58 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.22■■■□□ 2.91
SP110Q9HB58 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.12■■■□□ 2.89
SP110Q9HB58 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.05■■■□□ 2.88
SP110Q9HB58 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.97■■■□□ 2.87
SP110Q9HB58 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.78■■■□□ 2.84
SP110Q9HB58 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.69■■■□□ 2.82
SP110Q9HB58 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
SP110Q9HB58 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.33■■■□□ 2.77
SP110Q9HB58 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
SP110Q9HB58 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
SP110Q9HB58 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.15■■■□□ 2.74
SP110Q9HB58 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.15■■■□□ 2.74
SP110Q9HB58 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
SP110Q9HB58 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.98■■■□□ 2.71
SP110Q9HB58 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
SP110Q9HB58 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
SP110Q9HB58 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.75■■■□□ 2.67
SP110Q9HB58 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
SP110Q9HB58 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SP110Q9HB58 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
SP110Q9HB58 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.59■■■□□ 2.65
SP110Q9HB58 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
SP110Q9HB58 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SP110Q9HB58 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
SP110Q9HB58 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.23■■■□□ 2.59
SP110Q9HB58 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SP110Q9HB58 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.2■■■□□ 2.59
SP110Q9HB58 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SP110Q9HB58 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SP110Q9HB58 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SP110Q9HB58 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SP110Q9HB58 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
SP110Q9HB58 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SP110Q9HB58 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SP110Q9HB58 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.09■■■□□ 2.57
SP110Q9HB58 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.03■■■□□ 2.56
SP110Q9HB58 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SP110Q9HB58 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SP110Q9HB58 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.91■■■□□ 2.54
SP110Q9HB58 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
SP110Q9HB58 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
SP110Q9HB58 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
SP110Q9HB58 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SP110Q9HB58 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.66■■■□□ 2.5
SP110Q9HB58 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
SP110Q9HB58 AC015813.7-201ENST00000623294 581 ntBASIC30.56■■■□□ 2.48
SP110Q9HB58 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SP110Q9HB58 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
SP110Q9HB58 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.44■■■□□ 2.46
SP110Q9HB58 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SP110Q9HB58 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.35■■■□□ 2.45
SP110Q9HB58 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.34■■■□□ 2.45
SP110Q9HB58 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
SP110Q9HB58 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SP110Q9HB58 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.27■■■□□ 2.44
SP110Q9HB58 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SP110Q9HB58 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SP110Q9HB58 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SP110Q9HB58 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
SP110Q9HB58 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
SP110Q9HB58 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SP110Q9HB58 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SP110Q9HB58 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SP110Q9HB58 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SP110Q9HB58 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SP110Q9HB58 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
SP110Q9HB58 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SP110Q9HB58 AC006077.2-201ENST00000623591 457 ntBASIC30.06■■■□□ 2.4
SP110Q9HB58 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
SP110Q9HB58 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30■■■□□ 2.39
SP110Q9HB58 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.99■■■□□ 2.39
SP110Q9HB58 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SP110Q9HB58 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
SP110Q9HB58 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.93■■■□□ 2.38
SP110Q9HB58 ZNRF2P1-201ENST00000441407 443 ntBASIC29.92■■■□□ 2.38
SP110Q9HB58 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
SP110Q9HB58 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SP110Q9HB58 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SP110Q9HB58 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SP110Q9HB58 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
SP110Q9HB58 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
SP110Q9HB58 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.34
SP110Q9HB58 AC145285.7-201ENST00000614819 1539 ntBASIC29.67■■■□□ 2.34
SP110Q9HB58 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
SP110Q9HB58 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
SP110Q9HB58 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
SP110Q9HB58 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
SP110Q9HB58 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SP110Q9HB58 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SP110Q9HB58 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SP110Q9HB58 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.58■■■□□ 2.33
SP110Q9HB58 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.57■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms