Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.8■■■■□ 3.48
VRTNQ9H8Y1 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
VRTNQ9H8Y1 AL356512.1-201ENST00000607453 1739 ntBASIC35.78■■■■□ 3.32
VRTNQ9H8Y1 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.76■■■■□ 3.32
VRTNQ9H8Y1 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
VRTNQ9H8Y1 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
VRTNQ9H8Y1 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.4■■■■□ 3.26
VRTNQ9H8Y1 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.25■■■■□ 3.23
VRTNQ9H8Y1 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.91■■■■□ 3.18
VRTNQ9H8Y1 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.8■■■■□ 3.16
VRTNQ9H8Y1 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.68■■■■□ 3.14
VRTNQ9H8Y1 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.59■■■■□ 3.13
VRTNQ9H8Y1 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.59■■■■□ 3.13
VRTNQ9H8Y1 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.39■■■■□ 3.1
VRTNQ9H8Y1 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
VRTNQ9H8Y1 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.13■■■■□ 3.05
VRTNQ9H8Y1 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.99■■■■□ 3.03
VRTNQ9H8Y1 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.9■■■■□ 3.02
VRTNQ9H8Y1 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.89■■■■□ 3.02
VRTNQ9H8Y1 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.73■■■□□ 2.99
VRTNQ9H8Y1 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.69■■■□□ 2.98
VRTNQ9H8Y1 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.64■■■□□ 2.98
VRTNQ9H8Y1 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.38■■■□□ 2.93
VRTNQ9H8Y1 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
VRTNQ9H8Y1 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
VRTNQ9H8Y1 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.22■■■□□ 2.91
VRTNQ9H8Y1 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.12■■■□□ 2.89
VRTNQ9H8Y1 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
VRTNQ9H8Y1 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
VRTNQ9H8Y1 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.92■■■□□ 2.86
VRTNQ9H8Y1 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.9■■■□□ 2.86
VRTNQ9H8Y1 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
VRTNQ9H8Y1 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
VRTNQ9H8Y1 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
VRTNQ9H8Y1 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.84■■■□□ 2.85
VRTNQ9H8Y1 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.84■■■□□ 2.85
VRTNQ9H8Y1 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.85
VRTNQ9H8Y1 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
VRTNQ9H8Y1 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
VRTNQ9H8Y1 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.71■■■□□ 2.83
VRTNQ9H8Y1 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.69■■■□□ 2.82
VRTNQ9H8Y1 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.66■■■□□ 2.82
VRTNQ9H8Y1 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.62■■■□□ 2.81
VRTNQ9H8Y1 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
VRTNQ9H8Y1 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
VRTNQ9H8Y1 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.79
VRTNQ9H8Y1 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
VRTNQ9H8Y1 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.47■■■□□ 2.79
VRTNQ9H8Y1 AC015813.7-201ENST00000623294 581 ntBASIC32.33■■■□□ 2.77
VRTNQ9H8Y1 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.32■■■□□ 2.76
VRTNQ9H8Y1 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.22■■■□□ 2.75
VRTNQ9H8Y1 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
VRTNQ9H8Y1 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
VRTNQ9H8Y1 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
VRTNQ9H8Y1 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
VRTNQ9H8Y1 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
VRTNQ9H8Y1 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.97■■■□□ 2.71
VRTNQ9H8Y1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.96■■■□□ 2.71
VRTNQ9H8Y1 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.95■■■□□ 2.71
VRTNQ9H8Y1 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.95■■■□□ 2.7
VRTNQ9H8Y1 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
VRTNQ9H8Y1 AC006077.2-201ENST00000623591 457 ntBASIC31.85■■■□□ 2.69
VRTNQ9H8Y1 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
VRTNQ9H8Y1 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
VRTNQ9H8Y1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
VRTNQ9H8Y1 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
VRTNQ9H8Y1 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
VRTNQ9H8Y1 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
VRTNQ9H8Y1 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
VRTNQ9H8Y1 ZNRF2P1-201ENST00000441407 443 ntBASIC31.68■■■□□ 2.66
VRTNQ9H8Y1 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
VRTNQ9H8Y1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
VRTNQ9H8Y1 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
VRTNQ9H8Y1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
VRTNQ9H8Y1 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
VRTNQ9H8Y1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.47■■■□□ 2.63
VRTNQ9H8Y1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
VRTNQ9H8Y1 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
VRTNQ9H8Y1 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
VRTNQ9H8Y1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
VRTNQ9H8Y1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.38■■■□□ 2.61
VRTNQ9H8Y1 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
VRTNQ9H8Y1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
VRTNQ9H8Y1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
VRTNQ9H8Y1 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
VRTNQ9H8Y1 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
VRTNQ9H8Y1 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
VRTNQ9H8Y1 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
VRTNQ9H8Y1 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.24■■■□□ 2.59
VRTNQ9H8Y1 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.23■■■□□ 2.59
VRTNQ9H8Y1 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
VRTNQ9H8Y1 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
VRTNQ9H8Y1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.17■■■□□ 2.58
VRTNQ9H8Y1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.16■■■□□ 2.58
VRTNQ9H8Y1 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
VRTNQ9H8Y1 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
VRTNQ9H8Y1 AC145285.7-201ENST00000614819 1539 ntBASIC31.14■■■□□ 2.57
VRTNQ9H8Y1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
VRTNQ9H8Y1 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
VRTNQ9H8Y1 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.08■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms