Protein–RNA interactions for Protein: Q9H7M6

ZSWIM4, Zinc finger SWIM domain-containing protein 4, humanhuman

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM4Q9H7M6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC38.4■■■■□ 3.74
ZSWIM4Q9H7M6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
ZSWIM4Q9H7M6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC37.29■■■■□ 3.56
ZSWIM4Q9H7M6 AL356512.1-201ENST00000607453 1739 ntBASIC37.27■■■■□ 3.56
ZSWIM4Q9H7M6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
ZSWIM4Q9H7M6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
ZSWIM4Q9H7M6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC37.02■■■■□ 3.52
ZSWIM4Q9H7M6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC36.6■■■■□ 3.45
ZSWIM4Q9H7M6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.31■■■■□ 3.4
ZSWIM4Q9H7M6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC36.28■■■■□ 3.4
ZSWIM4Q9H7M6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC36.28■■■■□ 3.4
ZSWIM4Q9H7M6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC36.04■■■■□ 3.36
ZSWIM4Q9H7M6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.99■■■■□ 3.35
ZSWIM4Q9H7M6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC35.89■■■■□ 3.34
ZSWIM4Q9H7M6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC35.86■■■■□ 3.33
ZSWIM4Q9H7M6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
ZSWIM4Q9H7M6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC35.65■■■■□ 3.3
ZSWIM4Q9H7M6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.59■■■■□ 3.29
ZSWIM4Q9H7M6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC35.46■■■■□ 3.27
ZSWIM4Q9H7M6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC35.41■■■■□ 3.26
ZSWIM4Q9H7M6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC35.37■■■■□ 3.25
ZSWIM4Q9H7M6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.31■■■■□ 3.24
ZSWIM4Q9H7M6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC35.19■■■■□ 3.22
ZSWIM4Q9H7M6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
ZSWIM4Q9H7M6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
ZSWIM4Q9H7M6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC34.76■■■■□ 3.15
ZSWIM4Q9H7M6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
ZSWIM4Q9H7M6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC34.67■■■■□ 3.14
ZSWIM4Q9H7M6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
ZSWIM4Q9H7M6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
ZSWIM4Q9H7M6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.55■■■■□ 3.12
ZSWIM4Q9H7M6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
ZSWIM4Q9H7M6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC34.48■■■■□ 3.11
ZSWIM4Q9H7M6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
ZSWIM4Q9H7M6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
ZSWIM4Q9H7M6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC34.39■■■■□ 3.1
ZSWIM4Q9H7M6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ZSWIM4Q9H7M6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
ZSWIM4Q9H7M6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC34.28■■■■□ 3.08
ZSWIM4Q9H7M6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC34.28■■■■□ 3.08
ZSWIM4Q9H7M6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
ZSWIM4Q9H7M6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC34.18■■■■□ 3.06
ZSWIM4Q9H7M6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC34.17■■■■□ 3.06
ZSWIM4Q9H7M6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC34.09■■■■□ 3.05
ZSWIM4Q9H7M6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
ZSWIM4Q9H7M6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC34.06■■■■□ 3.04
ZSWIM4Q9H7M6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC34.05■■■■□ 3.04
ZSWIM4Q9H7M6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
ZSWIM4Q9H7M6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.96■■■■□ 3.03
ZSWIM4Q9H7M6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.91■■■■□ 3.02
ZSWIM4Q9H7M6 AC015813.7-201ENST00000623294 581 ntBASIC33.8■■■■□ 3
ZSWIM4Q9H7M6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.78■■■■□ 3
ZSWIM4Q9H7M6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■□□ 2.99
ZSWIM4Q9H7M6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.75■■■□□ 2.99
ZSWIM4Q9H7M6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
ZSWIM4Q9H7M6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
ZSWIM4Q9H7M6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
ZSWIM4Q9H7M6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC33.64■■■□□ 2.98
ZSWIM4Q9H7M6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
ZSWIM4Q9H7M6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC33.55■■■□□ 2.96
ZSWIM4Q9H7M6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.51■■■□□ 2.95
ZSWIM4Q9H7M6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.48■■■□□ 2.95
ZSWIM4Q9H7M6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
ZSWIM4Q9H7M6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC33.4■■■□□ 2.94
ZSWIM4Q9H7M6 AC006077.2-201ENST00000623591 457 ntBASIC33.36■■■□□ 2.93
ZSWIM4Q9H7M6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
ZSWIM4Q9H7M6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
ZSWIM4Q9H7M6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC33.21■■■□□ 2.91
ZSWIM4Q9H7M6 ZNRF2P1-201ENST00000441407 443 ntBASIC33.21■■■□□ 2.91
ZSWIM4Q9H7M6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
ZSWIM4Q9H7M6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
ZSWIM4Q9H7M6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC33.11■■■□□ 2.89
ZSWIM4Q9H7M6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
ZSWIM4Q9H7M6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
ZSWIM4Q9H7M6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
ZSWIM4Q9H7M6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.99■■■□□ 2.87
ZSWIM4Q9H7M6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
ZSWIM4Q9H7M6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
ZSWIM4Q9H7M6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.9■■■□□ 2.86
ZSWIM4Q9H7M6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
ZSWIM4Q9H7M6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
ZSWIM4Q9H7M6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.75■■■□□ 2.83
ZSWIM4Q9H7M6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
ZSWIM4Q9H7M6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
ZSWIM4Q9H7M6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
ZSWIM4Q9H7M6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.7■■■□□ 2.82
ZSWIM4Q9H7M6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.68■■■□□ 2.82
ZSWIM4Q9H7M6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
ZSWIM4Q9H7M6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC32.67■■■□□ 2.82
ZSWIM4Q9H7M6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
ZSWIM4Q9H7M6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
ZSWIM4Q9H7M6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
ZSWIM4Q9H7M6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.65■■■□□ 2.82
ZSWIM4Q9H7M6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.65■■■□□ 2.82
ZSWIM4Q9H7M6 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC32.62■■■□□ 2.81
ZSWIM4Q9H7M6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.52■■■□□ 2.8
ZSWIM4Q9H7M6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.5■■■□□ 2.79
ZSWIM4Q9H7M6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.48■■■□□ 2.79
ZSWIM4Q9H7M6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
ZSWIM4Q9H7M6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.42■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms