Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
SLC6A7Q99884 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
SLC6A7Q99884 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC28.26■■■□□ 2.11
SLC6A7Q99884 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
SLC6A7Q99884 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
SLC6A7Q99884 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SLC6A7Q99884 HES6-203ENST00000409160 1600 ntTSL 2 BASIC27.59■■■□□ 2.01
SLC6A7Q99884 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC27.53■■■□□ 2
SLC6A7Q99884 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
SLC6A7Q99884 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SLC6A7Q99884 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC27.33■■□□□ 1.97
SLC6A7Q99884 AL356512.1-201ENST00000607453 1739 ntBASIC27.32■■□□□ 1.96
SLC6A7Q99884 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SLC6A7Q99884 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC27.12■■□□□ 1.93
SLC6A7Q99884 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC27.11■■□□□ 1.93
SLC6A7Q99884 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SLC6A7Q99884 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
SLC6A7Q99884 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC26.96■■□□□ 1.91
SLC6A7Q99884 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
SLC6A7Q99884 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.91■■□□□ 1.9
SLC6A7Q99884 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.83■■□□□ 1.89
SLC6A7Q99884 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SLC6A7Q99884 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
SLC6A7Q99884 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
SLC6A7Q99884 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC26.45■■□□□ 1.82
SLC6A7Q99884 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
SLC6A7Q99884 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SLC6A7Q99884 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC26.32■■□□□ 1.8
SLC6A7Q99884 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SLC6A7Q99884 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SLC6A7Q99884 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SLC6A7Q99884 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC26.2■■□□□ 1.78
SLC6A7Q99884 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC26.2■■□□□ 1.78
SLC6A7Q99884 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
SLC6A7Q99884 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SLC6A7Q99884 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
SLC6A7Q99884 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.02■■□□□ 1.76
SLC6A7Q99884 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
SLC6A7Q99884 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
SLC6A7Q99884 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
SLC6A7Q99884 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
SLC6A7Q99884 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SLC6A7Q99884 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
SLC6A7Q99884 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLC6A7Q99884 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLC6A7Q99884 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SLC6A7Q99884 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SLC6A7Q99884 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC25.69■■□□□ 1.7
SLC6A7Q99884 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
SLC6A7Q99884 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SLC6A7Q99884 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SLC6A7Q99884 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SLC6A7Q99884 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SLC6A7Q99884 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SLC6A7Q99884 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
SLC6A7Q99884 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SLC6A7Q99884 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
SLC6A7Q99884 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC25.55■■□□□ 1.68
SLC6A7Q99884 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC25.54■■□□□ 1.68
SLC6A7Q99884 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
SLC6A7Q99884 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC6A7Q99884 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SLC6A7Q99884 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SLC6A7Q99884 INO80B-203ENST00000409917 796 ntTSL 2 BASIC25.36■■□□□ 1.65
SLC6A7Q99884 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
SLC6A7Q99884 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SLC6A7Q99884 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SLC6A7Q99884 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.23■■□□□ 1.63
SLC6A7Q99884 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
SLC6A7Q99884 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SLC6A7Q99884 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SLC6A7Q99884 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SLC6A7Q99884 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SLC6A7Q99884 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
SLC6A7Q99884 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC25.06■■□□□ 1.6
SLC6A7Q99884 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC25.06■■□□□ 1.6
SLC6A7Q99884 ILK-212ENST00000532063 1617 ntTSL 2 BASIC25.05■■□□□ 1.6
SLC6A7Q99884 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SLC6A7Q99884 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SLC6A7Q99884 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
SLC6A7Q99884 AC006077.2-201ENST00000623591 457 ntBASIC25.01■■□□□ 1.59
SLC6A7Q99884 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25■■□□□ 1.59
SLC6A7Q99884 ZNRF2P1-201ENST00000441407 443 ntBASIC25■■□□□ 1.59
SLC6A7Q99884 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC24.98■■□□□ 1.59
SLC6A7Q99884 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
SLC6A7Q99884 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SLC6A7Q99884 AC015813.7-201ENST00000623294 581 ntBASIC24.95■■□□□ 1.58
SLC6A7Q99884 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC24.94■■□□□ 1.58
SLC6A7Q99884 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SLC6A7Q99884 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
SLC6A7Q99884 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
SLC6A7Q99884 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC24.87■■□□□ 1.57
SLC6A7Q99884 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC24.83■■□□□ 1.57
SLC6A7Q99884 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SLC6A7Q99884 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SLC6A7Q99884 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
SLC6A7Q99884 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SLC6A7Q99884 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC24.8■■□□□ 1.56
SLC6A7Q99884 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
SLC6A7Q99884 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms