Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.07■■■□□ 2.88
CMKLR1Q99788 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.6■■■□□ 2.81
CMKLR1Q99788 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CMKLR1Q99788 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.09■■■□□ 2.73
CMKLR1Q99788 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CMKLR1Q99788 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CMKLR1Q99788 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
CMKLR1Q99788 AL356512.1-201ENST00000607453 1739 ntBASIC31.65■■■□□ 2.66
CMKLR1Q99788 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
CMKLR1Q99788 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.12■■■□□ 2.57
CMKLR1Q99788 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.98■■■□□ 2.55
CMKLR1Q99788 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.94■■■□□ 2.54
CMKLR1Q99788 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.9■■■□□ 2.54
CMKLR1Q99788 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.89■■■□□ 2.54
CMKLR1Q99788 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
CMKLR1Q99788 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CMKLR1Q99788 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
CMKLR1Q99788 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.65■■■□□ 2.5
CMKLR1Q99788 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CMKLR1Q99788 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.36■■■□□ 2.45
CMKLR1Q99788 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.25■■■□□ 2.43
CMKLR1Q99788 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CMKLR1Q99788 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CMKLR1Q99788 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CMKLR1Q99788 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
CMKLR1Q99788 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CMKLR1Q99788 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
CMKLR1Q99788 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.19■■■□□ 2.42
CMKLR1Q99788 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CMKLR1Q99788 INO80B-203ENST00000409917 796 ntTSL 2 BASIC29.95■■■□□ 2.39
CMKLR1Q99788 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CMKLR1Q99788 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CMKLR1Q99788 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
CMKLR1Q99788 AC006077.2-201ENST00000623591 457 ntBASIC29.63■■■□□ 2.33
CMKLR1Q99788 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.6■■■□□ 2.33
CMKLR1Q99788 ZNRF2P1-201ENST00000441407 443 ntBASIC29.58■■■□□ 2.33
CMKLR1Q99788 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.56■■■□□ 2.32
CMKLR1Q99788 AC015813.7-201ENST00000623294 581 ntBASIC29.54■■■□□ 2.32
CMKLR1Q99788 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.43■■■□□ 2.3
CMKLR1Q99788 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC29.34■■■□□ 2.29
CMKLR1Q99788 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CMKLR1Q99788 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CMKLR1Q99788 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CMKLR1Q99788 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
CMKLR1Q99788 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CMKLR1Q99788 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
CMKLR1Q99788 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
CMKLR1Q99788 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
CMKLR1Q99788 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
CMKLR1Q99788 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
CMKLR1Q99788 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.02■■■□□ 2.24
CMKLR1Q99788 AP002365.1-201ENST00000603448 772 ntBASIC28.84■■■□□ 2.21
CMKLR1Q99788 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CMKLR1Q99788 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
CMKLR1Q99788 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CMKLR1Q99788 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CMKLR1Q99788 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.68■■■□□ 2.18
CMKLR1Q99788 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CMKLR1Q99788 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CMKLR1Q99788 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.62■■■□□ 2.17
CMKLR1Q99788 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.6■■■□□ 2.17
CMKLR1Q99788 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.6■■■□□ 2.17
CMKLR1Q99788 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CMKLR1Q99788 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
CMKLR1Q99788 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CMKLR1Q99788 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.53■■■□□ 2.16
CMKLR1Q99788 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.52■■■□□ 2.16
CMKLR1Q99788 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.51■■■□□ 2.15
CMKLR1Q99788 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CMKLR1Q99788 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
CMKLR1Q99788 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
CMKLR1Q99788 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.48■■■□□ 2.15
CMKLR1Q99788 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CMKLR1Q99788 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.47■■■□□ 2.15
CMKLR1Q99788 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.46■■■□□ 2.15
CMKLR1Q99788 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.46■■■□□ 2.15
CMKLR1Q99788 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.45■■■□□ 2.14
CMKLR1Q99788 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
CMKLR1Q99788 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
CMKLR1Q99788 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CMKLR1Q99788 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.37■■■□□ 2.13
CMKLR1Q99788 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.35■■■□□ 2.13
CMKLR1Q99788 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
CMKLR1Q99788 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
CMKLR1Q99788 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.32■■■□□ 2.12
CMKLR1Q99788 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
CMKLR1Q99788 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.27■■■□□ 2.12
CMKLR1Q99788 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CMKLR1Q99788 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CMKLR1Q99788 DYNLL1-208ENST00000550178 581 ntBASIC28.26■■■□□ 2.11
CMKLR1Q99788 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
CMKLR1Q99788 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.2■■■□□ 2.1
CMKLR1Q99788 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CMKLR1Q99788 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.16■■■□□ 2.1
CMKLR1Q99788 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CMKLR1Q99788 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
CMKLR1Q99788 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
CMKLR1Q99788 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.1■■■□□ 2.09
CMKLR1Q99788 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CMKLR1Q99788 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms