Protein–RNA interactions for Protein: Q92832

NELL1, Protein kinase C-binding protein NELL1, humanhuman

Predictions only

Length 810 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELL1Q92832 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.96■■■■□ 3.19
NELL1Q92832 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.86■■■■□ 3.17
NELL1Q92832 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.52■■■■□ 3.12
NELL1Q92832 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
NELL1Q92832 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
NELL1Q92832 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.38■■■□□ 2.93
NELL1Q92832 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.32■■■□□ 2.92
NELL1Q92832 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.3■■■□□ 2.92
NELL1Q92832 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.23■■■□□ 2.91
NELL1Q92832 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
NELL1Q92832 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
NELL1Q92832 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
NELL1Q92832 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.97■■■□□ 2.87
NELL1Q92832 AL356512.1-201ENST00000607453 1739 ntBASIC32.96■■■□□ 2.87
NELL1Q92832 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.95■■■□□ 2.87
NELL1Q92832 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
NELL1Q92832 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.45■■■□□ 2.79
NELL1Q92832 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.42■■■□□ 2.78
NELL1Q92832 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.39■■■□□ 2.78
NELL1Q92832 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
NELL1Q92832 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
NELL1Q92832 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
NELL1Q92832 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
NELL1Q92832 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.24■■■□□ 2.75
NELL1Q92832 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.2■■■□□ 2.74
NELL1Q92832 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
NELL1Q92832 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.05■■■□□ 2.72
NELL1Q92832 ZNRF2P1-201ENST00000441407 443 ntBASIC31.98■■■□□ 2.71
NELL1Q92832 AC006077.2-201ENST00000623591 457 ntBASIC31.96■■■□□ 2.71
NELL1Q92832 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
NELL1Q92832 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.77■■■□□ 2.68
NELL1Q92832 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
NELL1Q92832 AC015813.7-201ENST00000623294 581 ntBASIC31.56■■■□□ 2.64
NELL1Q92832 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.54■■■□□ 2.64
NELL1Q92832 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.54■■■□□ 2.64
NELL1Q92832 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
NELL1Q92832 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
NELL1Q92832 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.4■■■□□ 2.62
NELL1Q92832 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.29■■■□□ 2.6
NELL1Q92832 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.17■■■□□ 2.58
NELL1Q92832 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
NELL1Q92832 AP002365.1-201ENST00000603448 772 ntBASIC31.14■■■□□ 2.58
NELL1Q92832 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
NELL1Q92832 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
NELL1Q92832 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.95■■■□□ 2.54
NELL1Q92832 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
NELL1Q92832 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
NELL1Q92832 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.91■■■□□ 2.54
NELL1Q92832 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.9■■■□□ 2.54
NELL1Q92832 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.85■■■□□ 2.53
NELL1Q92832 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
NELL1Q92832 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
NELL1Q92832 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
NELL1Q92832 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.75■■■□□ 2.51
NELL1Q92832 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.73■■■□□ 2.51
NELL1Q92832 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.7■■■□□ 2.51
NELL1Q92832 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.69■■■□□ 2.5
NELL1Q92832 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.68■■■□□ 2.5
NELL1Q92832 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
NELL1Q92832 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NELL1Q92832 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.65■■■□□ 2.5
NELL1Q92832 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
NELL1Q92832 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
NELL1Q92832 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
NELL1Q92832 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
NELL1Q92832 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.54■■■□□ 2.48
NELL1Q92832 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.48■■■□□ 2.47
NELL1Q92832 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.44■■■□□ 2.46
NELL1Q92832 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NELL1Q92832 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
NELL1Q92832 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
NELL1Q92832 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
NELL1Q92832 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.3■■■□□ 2.44
NELL1Q92832 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
NELL1Q92832 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
NELL1Q92832 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
NELL1Q92832 DYNLL1-208ENST00000550178 581 ntBASIC30.23■■■□□ 2.43
NELL1Q92832 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
NELL1Q92832 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
NELL1Q92832 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
NELL1Q92832 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
NELL1Q92832 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.16■■■□□ 2.42
NELL1Q92832 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.16■■■□□ 2.42
NELL1Q92832 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
NELL1Q92832 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
NELL1Q92832 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
NELL1Q92832 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.11■■■□□ 2.41
NELL1Q92832 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
NELL1Q92832 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.09■■■□□ 2.41
NELL1Q92832 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.06■■■□□ 2.4
NELL1Q92832 AL031258.1-201ENST00000623562 325 ntBASIC30.05■■■□□ 2.4
NELL1Q92832 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.02■■■□□ 2.4
NELL1Q92832 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.01■■■□□ 2.4
NELL1Q92832 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
NELL1Q92832 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30■■■□□ 2.39
NELL1Q92832 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
NELL1Q92832 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
NELL1Q92832 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.92■■■□□ 2.38
NELL1Q92832 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.92■■■□□ 2.38
NELL1Q92832 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.92■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms