Protein–RNA interactions for Protein: Q8WU76

SCFD2, Sec1 family domain-containing protein 2, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2Q8WU76 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC39.09■■■■□ 3.85
SCFD2Q8WU76 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC38.34■■■■□ 3.73
SCFD2Q8WU76 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
SCFD2Q8WU76 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
SCFD2Q8WU76 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.64
SCFD2Q8WU76 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC37.73■■■■□ 3.63
SCFD2Q8WU76 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC37.71■■■■□ 3.63
SCFD2Q8WU76 AL356512.1-201ENST00000607453 1739 ntBASIC37.54■■■■□ 3.6
SCFD2Q8WU76 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC36.76■■■■□ 3.48
SCFD2Q8WU76 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC36.61■■■■□ 3.45
SCFD2Q8WU76 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC36.58■■■■□ 3.45
SCFD2Q8WU76 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC36.56■■■■□ 3.44
SCFD2Q8WU76 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC36.5■■■■□ 3.43
SCFD2Q8WU76 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC36.49■■■■□ 3.43
SCFD2Q8WU76 HES6-203ENST00000409160 1600 ntTSL 2 BASIC36.47■■■■□ 3.43
SCFD2Q8WU76 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC36.22■■■■□ 3.39
SCFD2Q8WU76 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC36.14■■■■□ 3.38
SCFD2Q8WU76 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC36.14■■■■□ 3.38
SCFD2Q8WU76 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC36.07■■■■□ 3.36
SCFD2Q8WU76 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.95■■■■□ 3.35
SCFD2Q8WU76 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
SCFD2Q8WU76 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
SCFD2Q8WU76 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC35.8■■■■□ 3.32
SCFD2Q8WU76 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
SCFD2Q8WU76 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
SCFD2Q8WU76 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC35.48■■■■□ 3.27
SCFD2Q8WU76 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
SCFD2Q8WU76 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
SCFD2Q8WU76 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC35.39■■■■□ 3.26
SCFD2Q8WU76 INO80B-203ENST00000409917 796 ntTSL 2 BASIC35.28■■■■□ 3.24
SCFD2Q8WU76 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
SCFD2Q8WU76 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC35.1■■■■□ 3.21
SCFD2Q8WU76 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
SCFD2Q8WU76 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
SCFD2Q8WU76 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC34.82■■■■□ 3.16
SCFD2Q8WU76 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.81■■■■□ 3.16
SCFD2Q8WU76 AC015813.7-201ENST00000623294 581 ntBASIC34.81■■■■□ 3.16
SCFD2Q8WU76 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC34.77■■■■□ 3.16
SCFD2Q8WU76 AC006077.2-201ENST00000623591 457 ntBASIC34.77■■■■□ 3.16
SCFD2Q8WU76 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC34.77■■■■□ 3.16
SCFD2Q8WU76 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC34.75■■■■□ 3.15
SCFD2Q8WU76 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC34.71■■■■□ 3.15
SCFD2Q8WU76 ZNRF2P1-201ENST00000441407 443 ntBASIC34.69■■■■□ 3.14
SCFD2Q8WU76 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
SCFD2Q8WU76 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC34.66■■■■□ 3.14
SCFD2Q8WU76 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC34.55■■■■□ 3.12
SCFD2Q8WU76 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
SCFD2Q8WU76 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
SCFD2Q8WU76 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC34.22■■■■□ 3.07
SCFD2Q8WU76 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC34.22■■■■□ 3.07
SCFD2Q8WU76 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
SCFD2Q8WU76 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
SCFD2Q8WU76 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
SCFD2Q8WU76 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.97■■■■□ 3.03
SCFD2Q8WU76 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.93■■■■□ 3.02
SCFD2Q8WU76 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
SCFD2Q8WU76 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.89■■■■□ 3.02
SCFD2Q8WU76 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.85■■■■□ 3.01
SCFD2Q8WU76 AP002365.1-201ENST00000603448 772 ntBASIC33.83■■■■□ 3.01
SCFD2Q8WU76 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
SCFD2Q8WU76 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC33.78■■■■□ 3
SCFD2Q8WU76 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.77■■■■□ 3
SCFD2Q8WU76 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
SCFD2Q8WU76 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC33.75■■■□□ 2.99
SCFD2Q8WU76 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
SCFD2Q8WU76 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
SCFD2Q8WU76 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
SCFD2Q8WU76 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
SCFD2Q8WU76 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC33.65■■■□□ 2.98
SCFD2Q8WU76 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
SCFD2Q8WU76 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC33.63■■■□□ 2.97
SCFD2Q8WU76 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC33.62■■■□□ 2.97
SCFD2Q8WU76 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC33.61■■■□□ 2.97
SCFD2Q8WU76 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC33.6■■■□□ 2.97
SCFD2Q8WU76 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.57■■■□□ 2.96
SCFD2Q8WU76 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC33.53■■■□□ 2.96
SCFD2Q8WU76 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC33.53■■■□□ 2.96
SCFD2Q8WU76 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
SCFD2Q8WU76 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC33.53■■■□□ 2.96
SCFD2Q8WU76 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
SCFD2Q8WU76 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.49■■■□□ 2.95
SCFD2Q8WU76 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
SCFD2Q8WU76 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
SCFD2Q8WU76 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC33.47■■■□□ 2.95
SCFD2Q8WU76 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC33.45■■■□□ 2.95
SCFD2Q8WU76 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC33.4■■■□□ 2.94
SCFD2Q8WU76 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC33.4■■■□□ 2.94
SCFD2Q8WU76 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC33.36■■■□□ 2.93
SCFD2Q8WU76 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC33.34■■■□□ 2.93
SCFD2Q8WU76 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC33.29■■■□□ 2.92
SCFD2Q8WU76 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
SCFD2Q8WU76 DYNLL1-208ENST00000550178 581 ntBASIC33.28■■■□□ 2.92
SCFD2Q8WU76 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC33.26■■■□□ 2.91
SCFD2Q8WU76 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC33.25■■■□□ 2.91
SCFD2Q8WU76 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
SCFD2Q8WU76 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC33.17■■■□□ 2.9
SCFD2Q8WU76 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
SCFD2Q8WU76 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC33.15■■■□□ 2.9
SCFD2Q8WU76 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
SCFD2Q8WU76 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms