Protein–RNA interactions for Protein: Q8NDN9

RCBTB1, RCC1 and BTB domain-containing protein 1, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1Q8NDN9 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
RCBTB1Q8NDN9 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.47■■■□□ 2.79
RCBTB1Q8NDN9 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
RCBTB1Q8NDN9 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RCBTB1Q8NDN9 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
RCBTB1Q8NDN9 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.02■■■□□ 2.72
RCBTB1Q8NDN9 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC31.99■■■□□ 2.71
RCBTB1Q8NDN9 AL356512.1-201ENST00000607453 1739 ntBASIC31.84■■■□□ 2.69
RCBTB1Q8NDN9 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
RCBTB1Q8NDN9 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.07■■■□□ 2.56
RCBTB1Q8NDN9 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.04■■■□□ 2.56
RCBTB1Q8NDN9 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.03■■■□□ 2.56
RCBTB1Q8NDN9 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.98■■■□□ 2.55
RCBTB1Q8NDN9 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.55
RCBTB1Q8NDN9 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.84■■■□□ 2.53
RCBTB1Q8NDN9 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
RCBTB1Q8NDN9 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
RCBTB1Q8NDN9 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
RCBTB1Q8NDN9 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.64■■■□□ 2.5
RCBTB1Q8NDN9 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.47■■■□□ 2.47
RCBTB1Q8NDN9 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
RCBTB1Q8NDN9 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RCBTB1Q8NDN9 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
RCBTB1Q8NDN9 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RCBTB1Q8NDN9 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RCBTB1Q8NDN9 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.14■■■□□ 2.42
RCBTB1Q8NDN9 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RCBTB1Q8NDN9 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RCBTB1Q8NDN9 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.09■■■□□ 2.41
RCBTB1Q8NDN9 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
RCBTB1Q8NDN9 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.01■■■□□ 2.39
RCBTB1Q8NDN9 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RCBTB1Q8NDN9 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RCBTB1Q8NDN9 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.59■■■□□ 2.33
RCBTB1Q8NDN9 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
RCBTB1Q8NDN9 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.57■■■□□ 2.32
RCBTB1Q8NDN9 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.55■■■□□ 2.32
RCBTB1Q8NDN9 AC015813.7-201ENST00000623294 581 ntBASIC29.53■■■□□ 2.32
RCBTB1Q8NDN9 AC006077.2-201ENST00000623591 457 ntBASIC29.47■■■□□ 2.31
RCBTB1Q8NDN9 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.46■■■□□ 2.31
RCBTB1Q8NDN9 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
RCBTB1Q8NDN9 ZNRF2P1-201ENST00000441407 443 ntBASIC29.43■■■□□ 2.3
RCBTB1Q8NDN9 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RCBTB1Q8NDN9 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
RCBTB1Q8NDN9 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
RCBTB1Q8NDN9 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
RCBTB1Q8NDN9 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
RCBTB1Q8NDN9 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
RCBTB1Q8NDN9 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
RCBTB1Q8NDN9 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
RCBTB1Q8NDN9 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.08■■■□□ 2.25
RCBTB1Q8NDN9 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
RCBTB1Q8NDN9 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.88■■■□□ 2.21
RCBTB1Q8NDN9 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.88■■■□□ 2.21
RCBTB1Q8NDN9 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.84■■■□□ 2.21
RCBTB1Q8NDN9 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
RCBTB1Q8NDN9 AP002365.1-201ENST00000603448 772 ntBASIC28.74■■■□□ 2.19
RCBTB1Q8NDN9 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.69■■■□□ 2.18
RCBTB1Q8NDN9 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.67■■■□□ 2.18
RCBTB1Q8NDN9 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
RCBTB1Q8NDN9 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RCBTB1Q8NDN9 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
RCBTB1Q8NDN9 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
RCBTB1Q8NDN9 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
RCBTB1Q8NDN9 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
RCBTB1Q8NDN9 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
RCBTB1Q8NDN9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
RCBTB1Q8NDN9 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.58■■■□□ 2.17
RCBTB1Q8NDN9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.58■■■□□ 2.17
RCBTB1Q8NDN9 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.57■■■□□ 2.16
RCBTB1Q8NDN9 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RCBTB1Q8NDN9 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
RCBTB1Q8NDN9 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
RCBTB1Q8NDN9 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
RCBTB1Q8NDN9 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
RCBTB1Q8NDN9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.53■■■□□ 2.16
RCBTB1Q8NDN9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
RCBTB1Q8NDN9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.53■■■□□ 2.16
RCBTB1Q8NDN9 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.52■■■□□ 2.16
RCBTB1Q8NDN9 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.46■■■□□ 2.15
RCBTB1Q8NDN9 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.43■■■□□ 2.14
RCBTB1Q8NDN9 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RCBTB1Q8NDN9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.39■■■□□ 2.14
RCBTB1Q8NDN9 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
RCBTB1Q8NDN9 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
RCBTB1Q8NDN9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
RCBTB1Q8NDN9 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.35■■■□□ 2.13
RCBTB1Q8NDN9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.3■■■□□ 2.12
RCBTB1Q8NDN9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
RCBTB1Q8NDN9 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RCBTB1Q8NDN9 DYNLL1-208ENST00000550178 581 ntBASIC28.28■■■□□ 2.12
RCBTB1Q8NDN9 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
RCBTB1Q8NDN9 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RCBTB1Q8NDN9 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
RCBTB1Q8NDN9 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
RCBTB1Q8NDN9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.18■■■□□ 2.1
RCBTB1Q8NDN9 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.18■■■□□ 2.1
RCBTB1Q8NDN9 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RCBTB1Q8NDN9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
RCBTB1Q8NDN9 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms