Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.57■■■■□ 3.61
RNF169Q8NCN4 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.74■■■■□ 3.47
RNF169Q8NCN4 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
RNF169Q8NCN4 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
RNF169Q8NCN4 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
RNF169Q8NCN4 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.3■■■■□ 3.4
RNF169Q8NCN4 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.17■■■■□ 3.38
RNF169Q8NCN4 AL356512.1-201ENST00000607453 1739 ntBASIC36.11■■■■□ 3.37
RNF169Q8NCN4 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.32■■■■□ 3.24
RNF169Q8NCN4 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.24■■■■□ 3.23
RNF169Q8NCN4 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.15■■■■□ 3.22
RNF169Q8NCN4 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC35.14■■■■□ 3.22
RNF169Q8NCN4 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC35.09■■■■□ 3.21
RNF169Q8NCN4 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC35.08■■■■□ 3.21
RNF169Q8NCN4 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.01■■■■□ 3.19
RNF169Q8NCN4 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.83■■■■□ 3.17
RNF169Q8NCN4 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.78■■■■□ 3.16
RNF169Q8NCN4 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.77■■■■□ 3.16
RNF169Q8NCN4 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
RNF169Q8NCN4 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.6■■■■□ 3.13
RNF169Q8NCN4 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
RNF169Q8NCN4 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.42■■■■□ 3.1
RNF169Q8NCN4 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
RNF169Q8NCN4 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
RNF169Q8NCN4 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
RNF169Q8NCN4 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC34.14■■■■□ 3.06
RNF169Q8NCN4 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
RNF169Q8NCN4 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC34.03■■■■□ 3.04
RNF169Q8NCN4 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.96■■■■□ 3.03
RNF169Q8NCN4 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
RNF169Q8NCN4 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
RNF169Q8NCN4 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.85■■■■□ 3.01
RNF169Q8NCN4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
RNF169Q8NCN4 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.53■■■□□ 2.96
RNF169Q8NCN4 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
RNF169Q8NCN4 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.43■■■□□ 2.94
RNF169Q8NCN4 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.43■■■□□ 2.94
RNF169Q8NCN4 AC015813.7-201ENST00000623294 581 ntBASIC33.41■■■□□ 2.94
RNF169Q8NCN4 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.37■■■□□ 2.93
RNF169Q8NCN4 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.36■■■□□ 2.93
RNF169Q8NCN4 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
RNF169Q8NCN4 AC006077.2-201ENST00000623591 457 ntBASIC33.3■■■□□ 2.92
RNF169Q8NCN4 ZNRF2P1-201ENST00000441407 443 ntBASIC33.27■■■□□ 2.92
RNF169Q8NCN4 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.22■■■□□ 2.91
RNF169Q8NCN4 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.18■■■□□ 2.9
RNF169Q8NCN4 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
RNF169Q8NCN4 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
RNF169Q8NCN4 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
RNF169Q8NCN4 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
RNF169Q8NCN4 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.93■■■□□ 2.86
RNF169Q8NCN4 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
RNF169Q8NCN4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
RNF169Q8NCN4 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.78■■■□□ 2.84
RNF169Q8NCN4 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.75■■■□□ 2.83
RNF169Q8NCN4 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.72■■■□□ 2.83
RNF169Q8NCN4 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
RNF169Q8NCN4 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.56■■■□□ 2.8
RNF169Q8NCN4 AP002365.1-201ENST00000603448 772 ntBASIC32.49■■■□□ 2.79
RNF169Q8NCN4 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
RNF169Q8NCN4 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
RNF169Q8NCN4 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.47■■■□□ 2.79
RNF169Q8NCN4 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
RNF169Q8NCN4 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.43■■■□□ 2.78
RNF169Q8NCN4 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.42■■■□□ 2.78
RNF169Q8NCN4 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.42■■■□□ 2.78
RNF169Q8NCN4 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
RNF169Q8NCN4 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
RNF169Q8NCN4 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RNF169Q8NCN4 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
RNF169Q8NCN4 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
RNF169Q8NCN4 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.39■■■□□ 2.78
RNF169Q8NCN4 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
RNF169Q8NCN4 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.3■■■□□ 2.76
RNF169Q8NCN4 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.29■■■□□ 2.76
RNF169Q8NCN4 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.28■■■□□ 2.76
RNF169Q8NCN4 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
RNF169Q8NCN4 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.28■■■□□ 2.76
RNF169Q8NCN4 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.23■■■□□ 2.75
RNF169Q8NCN4 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
RNF169Q8NCN4 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.18■■■□□ 2.74
RNF169Q8NCN4 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.17■■■□□ 2.74
RNF169Q8NCN4 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
RNF169Q8NCN4 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
RNF169Q8NCN4 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.11■■■□□ 2.73
RNF169Q8NCN4 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC32.1■■■□□ 2.73
RNF169Q8NCN4 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC32.05■■■□□ 2.72
RNF169Q8NCN4 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.04■■■□□ 2.72
RNF169Q8NCN4 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32■■■□□ 2.71
RNF169Q8NCN4 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RNF169Q8NCN4 DYNLL1-208ENST00000550178 581 ntBASIC32■■■□□ 2.71
RNF169Q8NCN4 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
RNF169Q8NCN4 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
RNF169Q8NCN4 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
RNF169Q8NCN4 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
RNF169Q8NCN4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
RNF169Q8NCN4 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.88■■■□□ 2.69
RNF169Q8NCN4 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
RNF169Q8NCN4 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
RNF169Q8NCN4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.85■■■□□ 2.69
RNF169Q8NCN4 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms