Protein–RNA interactions for Protein: Q8NC56

LEMD2, LEM domain-containing protein 2, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2Q8NC56 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.21■■■■□ 3.39
LEMD2Q8NC56 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.64■■■■□ 3.3
LEMD2Q8NC56 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
LEMD2Q8NC56 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
LEMD2Q8NC56 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.03■■■■□ 3.2
LEMD2Q8NC56 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
LEMD2Q8NC56 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.92■■■■□ 3.18
LEMD2Q8NC56 AL356512.1-201ENST00000607453 1739 ntBASIC34.72■■■■□ 3.15
LEMD2Q8NC56 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.12■■■■□ 3.05
LEMD2Q8NC56 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.95■■■■□ 3.03
LEMD2Q8NC56 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.91■■■■□ 3.02
LEMD2Q8NC56 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.88■■■■□ 3.01
LEMD2Q8NC56 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.84■■■■□ 3.01
LEMD2Q8NC56 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.84■■■■□ 3.01
LEMD2Q8NC56 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.75■■■□□ 2.99
LEMD2Q8NC56 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.55■■■□□ 2.96
LEMD2Q8NC56 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.54■■■□□ 2.96
LEMD2Q8NC56 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
LEMD2Q8NC56 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.39■■■□□ 2.94
LEMD2Q8NC56 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
LEMD2Q8NC56 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.25■■■□□ 2.91
LEMD2Q8NC56 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
LEMD2Q8NC56 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.14■■■□□ 2.9
LEMD2Q8NC56 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
LEMD2Q8NC56 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
LEMD2Q8NC56 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
LEMD2Q8NC56 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.93■■■□□ 2.86
LEMD2Q8NC56 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.92■■■□□ 2.86
LEMD2Q8NC56 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
LEMD2Q8NC56 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.68■■■□□ 2.82
LEMD2Q8NC56 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
LEMD2Q8NC56 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
LEMD2Q8NC56 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.35■■■□□ 2.77
LEMD2Q8NC56 AC006077.2-201ENST00000623591 457 ntBASIC32.33■■■□□ 2.77
LEMD2Q8NC56 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.29■■■□□ 2.76
LEMD2Q8NC56 AC015813.7-201ENST00000623294 581 ntBASIC32.29■■■□□ 2.76
LEMD2Q8NC56 ZNRF2P1-201ENST00000441407 443 ntBASIC32.25■■■□□ 2.75
LEMD2Q8NC56 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.25■■■□□ 2.75
LEMD2Q8NC56 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.25■■■□□ 2.75
LEMD2Q8NC56 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.22■■■□□ 2.75
LEMD2Q8NC56 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
LEMD2Q8NC56 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
LEMD2Q8NC56 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
LEMD2Q8NC56 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
LEMD2Q8NC56 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
LEMD2Q8NC56 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
LEMD2Q8NC56 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
LEMD2Q8NC56 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.71■■■□□ 2.67
LEMD2Q8NC56 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
LEMD2Q8NC56 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
LEMD2Q8NC56 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
LEMD2Q8NC56 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
LEMD2Q8NC56 AP002365.1-201ENST00000603448 772 ntBASIC31.43■■■□□ 2.62
LEMD2Q8NC56 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
LEMD2Q8NC56 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
LEMD2Q8NC56 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
LEMD2Q8NC56 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
LEMD2Q8NC56 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.33■■■□□ 2.61
LEMD2Q8NC56 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.32■■■□□ 2.6
LEMD2Q8NC56 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.29■■■□□ 2.6
LEMD2Q8NC56 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
LEMD2Q8NC56 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.28■■■□□ 2.6
LEMD2Q8NC56 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
LEMD2Q8NC56 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
LEMD2Q8NC56 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.23■■■□□ 2.59
LEMD2Q8NC56 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
LEMD2Q8NC56 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
LEMD2Q8NC56 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.2■■■□□ 2.59
LEMD2Q8NC56 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
LEMD2Q8NC56 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.18■■■□□ 2.58
LEMD2Q8NC56 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
LEMD2Q8NC56 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.17■■■□□ 2.58
LEMD2Q8NC56 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.12■■■□□ 2.57
LEMD2Q8NC56 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.12■■■□□ 2.57
LEMD2Q8NC56 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
LEMD2Q8NC56 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.08■■■□□ 2.57
LEMD2Q8NC56 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
LEMD2Q8NC56 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.04■■■□□ 2.56
LEMD2Q8NC56 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.02■■■□□ 2.56
LEMD2Q8NC56 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.01■■■□□ 2.55
LEMD2Q8NC56 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
LEMD2Q8NC56 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31■■■□□ 2.55
LEMD2Q8NC56 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
LEMD2Q8NC56 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
LEMD2Q8NC56 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
LEMD2Q8NC56 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
LEMD2Q8NC56 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.89■■■□□ 2.54
LEMD2Q8NC56 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.86■■■□□ 2.53
LEMD2Q8NC56 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
LEMD2Q8NC56 DYNLL1-208ENST00000550178 581 ntBASIC30.84■■■□□ 2.53
LEMD2Q8NC56 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
LEMD2Q8NC56 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
LEMD2Q8NC56 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.79■■■□□ 2.52
LEMD2Q8NC56 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
LEMD2Q8NC56 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
LEMD2Q8NC56 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
LEMD2Q8NC56 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
LEMD2Q8NC56 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
LEMD2Q8NC56 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.68■■■□□ 2.5
LEMD2Q8NC56 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.65■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 7.3 ms