Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC35.07■■■■□ 3.2
PAF1Q8N7H5 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.52■■■■□ 3.12
PAF1Q8N7H5 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
PAF1Q8N7H5 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.58■■■□□ 2.97
PAF1Q8N7H5 AL356512.1-201ENST00000607453 1739 ntBASIC33.56■■■□□ 2.96
PAF1Q8N7H5 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
PAF1Q8N7H5 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
PAF1Q8N7H5 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.23■■■□□ 2.91
PAF1Q8N7H5 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.92■■■□□ 2.86
PAF1Q8N7H5 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.7■■■□□ 2.83
PAF1Q8N7H5 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.61■■■□□ 2.81
PAF1Q8N7H5 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.6■■■□□ 2.81
PAF1Q8N7H5 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.47■■■□□ 2.79
PAF1Q8N7H5 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.36■■■□□ 2.77
PAF1Q8N7H5 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.33■■■□□ 2.77
PAF1Q8N7H5 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PAF1Q8N7H5 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PAF1Q8N7H5 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
PAF1Q8N7H5 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.02■■■□□ 2.72
PAF1Q8N7H5 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.9■■■□□ 2.7
PAF1Q8N7H5 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.87■■■□□ 2.69
PAF1Q8N7H5 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
PAF1Q8N7H5 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
PAF1Q8N7H5 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
PAF1Q8N7H5 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PAF1Q8N7H5 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
PAF1Q8N7H5 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
PAF1Q8N7H5 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
PAF1Q8N7H5 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PAF1Q8N7H5 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
PAF1Q8N7H5 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.12■■■□□ 2.57
PAF1Q8N7H5 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
PAF1Q8N7H5 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PAF1Q8N7H5 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
PAF1Q8N7H5 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PAF1Q8N7H5 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.97■■■□□ 2.55
PAF1Q8N7H5 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PAF1Q8N7H5 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.94■■■□□ 2.54
PAF1Q8N7H5 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
PAF1Q8N7H5 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.86■■■□□ 2.53
PAF1Q8N7H5 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PAF1Q8N7H5 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
PAF1Q8N7H5 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
PAF1Q8N7H5 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.76■■■□□ 2.51
PAF1Q8N7H5 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.72■■■□□ 2.51
PAF1Q8N7H5 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PAF1Q8N7H5 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PAF1Q8N7H5 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
PAF1Q8N7H5 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.57■■■□□ 2.48
PAF1Q8N7H5 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
PAF1Q8N7H5 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PAF1Q8N7H5 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PAF1Q8N7H5 AC015813.7-201ENST00000623294 581 ntBASIC30.32■■■□□ 2.44
PAF1Q8N7H5 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.28■■■□□ 2.44
PAF1Q8N7H5 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
PAF1Q8N7H5 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.18■■■□□ 2.42
PAF1Q8N7H5 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
PAF1Q8N7H5 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.16■■■□□ 2.42
PAF1Q8N7H5 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PAF1Q8N7H5 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PAF1Q8N7H5 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.1■■■□□ 2.41
PAF1Q8N7H5 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PAF1Q8N7H5 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
PAF1Q8N7H5 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
PAF1Q8N7H5 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
PAF1Q8N7H5 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.94■■■□□ 2.38
PAF1Q8N7H5 AC006077.2-201ENST00000623591 457 ntBASIC29.94■■■□□ 2.38
PAF1Q8N7H5 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
PAF1Q8N7H5 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
PAF1Q8N7H5 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
PAF1Q8N7H5 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
PAF1Q8N7H5 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
PAF1Q8N7H5 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
PAF1Q8N7H5 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
PAF1Q8N7H5 ZNRF2P1-201ENST00000441407 443 ntBASIC29.82■■■□□ 2.36
PAF1Q8N7H5 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
PAF1Q8N7H5 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
PAF1Q8N7H5 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PAF1Q8N7H5 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
PAF1Q8N7H5 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
PAF1Q8N7H5 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PAF1Q8N7H5 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PAF1Q8N7H5 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
PAF1Q8N7H5 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.57■■■□□ 2.32
PAF1Q8N7H5 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
PAF1Q8N7H5 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
PAF1Q8N7H5 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
PAF1Q8N7H5 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
PAF1Q8N7H5 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
PAF1Q8N7H5 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
PAF1Q8N7H5 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PAF1Q8N7H5 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC29.44■■■□□ 2.3
PAF1Q8N7H5 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PAF1Q8N7H5 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
PAF1Q8N7H5 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
PAF1Q8N7H5 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.4■■■□□ 2.3
PAF1Q8N7H5 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
PAF1Q8N7H5 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PAF1Q8N7H5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC29.33■■■□□ 2.29
PAF1Q8N7H5 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms