Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
EFCAB3Q8N7B9 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
EFCAB3Q8N7B9 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.06■■■□□ 2.72
EFCAB3Q8N7B9 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
EFCAB3Q8N7B9 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
EFCAB3Q8N7B9 AL356512.1-201ENST00000607453 1739 ntBASIC31.49■■■□□ 2.63
EFCAB3Q8N7B9 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
EFCAB3Q8N7B9 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
EFCAB3Q8N7B9 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC31.27■■■□□ 2.6
EFCAB3Q8N7B9 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
EFCAB3Q8N7B9 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.2■■■□□ 2.59
EFCAB3Q8N7B9 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
EFCAB3Q8N7B9 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
EFCAB3Q8N7B9 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
EFCAB3Q8N7B9 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.01■■■□□ 2.56
EFCAB3Q8N7B9 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.86■■■□□ 2.53
EFCAB3Q8N7B9 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.74■■■□□ 2.51
EFCAB3Q8N7B9 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.64■■■□□ 2.5
EFCAB3Q8N7B9 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.56■■■□□ 2.48
EFCAB3Q8N7B9 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.56■■■□□ 2.48
EFCAB3Q8N7B9 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
EFCAB3Q8N7B9 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.49■■■□□ 2.47
EFCAB3Q8N7B9 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
EFCAB3Q8N7B9 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
EFCAB3Q8N7B9 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
EFCAB3Q8N7B9 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
EFCAB3Q8N7B9 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
EFCAB3Q8N7B9 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.39
EFCAB3Q8N7B9 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
EFCAB3Q8N7B9 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.91■■■□□ 2.38
EFCAB3Q8N7B9 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
EFCAB3Q8N7B9 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.82■■■□□ 2.36
EFCAB3Q8N7B9 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
EFCAB3Q8N7B9 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
EFCAB3Q8N7B9 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
EFCAB3Q8N7B9 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
EFCAB3Q8N7B9 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.64■■■□□ 2.34
EFCAB3Q8N7B9 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
EFCAB3Q8N7B9 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
EFCAB3Q8N7B9 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.51■■■□□ 2.31
EFCAB3Q8N7B9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
EFCAB3Q8N7B9 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
EFCAB3Q8N7B9 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
EFCAB3Q8N7B9 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
EFCAB3Q8N7B9 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
EFCAB3Q8N7B9 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
EFCAB3Q8N7B9 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
EFCAB3Q8N7B9 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
EFCAB3Q8N7B9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
EFCAB3Q8N7B9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
EFCAB3Q8N7B9 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.24■■■□□ 2.27
EFCAB3Q8N7B9 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
EFCAB3Q8N7B9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
EFCAB3Q8N7B9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.12■■■□□ 2.25
EFCAB3Q8N7B9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
EFCAB3Q8N7B9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
EFCAB3Q8N7B9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
EFCAB3Q8N7B9 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
EFCAB3Q8N7B9 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
EFCAB3Q8N7B9 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC29■■■□□ 2.23
EFCAB3Q8N7B9 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC29■■■□□ 2.23
EFCAB3Q8N7B9 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.96■■■□□ 2.23
EFCAB3Q8N7B9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
EFCAB3Q8N7B9 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
EFCAB3Q8N7B9 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
EFCAB3Q8N7B9 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
EFCAB3Q8N7B9 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
EFCAB3Q8N7B9 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.83■■■□□ 2.21
EFCAB3Q8N7B9 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
EFCAB3Q8N7B9 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.67■■■□□ 2.18
EFCAB3Q8N7B9 ZNRF2P1-201ENST00000441407 443 ntBASIC28.6■■■□□ 2.17
EFCAB3Q8N7B9 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
EFCAB3Q8N7B9 AC006077.2-201ENST00000623591 457 ntBASIC28.57■■■□□ 2.16
EFCAB3Q8N7B9 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.56■■■□□ 2.16
EFCAB3Q8N7B9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
EFCAB3Q8N7B9 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.55■■■□□ 2.16
EFCAB3Q8N7B9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
EFCAB3Q8N7B9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
EFCAB3Q8N7B9 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
EFCAB3Q8N7B9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
EFCAB3Q8N7B9 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28.5■■■□□ 2.15
EFCAB3Q8N7B9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
EFCAB3Q8N7B9 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
EFCAB3Q8N7B9 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
EFCAB3Q8N7B9 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.15
EFCAB3Q8N7B9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
EFCAB3Q8N7B9 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.43■■■□□ 2.14
EFCAB3Q8N7B9 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
EFCAB3Q8N7B9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.41■■■□□ 2.14
EFCAB3Q8N7B9 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.41■■■□□ 2.14
EFCAB3Q8N7B9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
EFCAB3Q8N7B9 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.37■■■□□ 2.13
EFCAB3Q8N7B9 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
EFCAB3Q8N7B9 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
EFCAB3Q8N7B9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
EFCAB3Q8N7B9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
EFCAB3Q8N7B9 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
EFCAB3Q8N7B9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.31■■■□□ 2.12
EFCAB3Q8N7B9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.3■■■□□ 2.12
EFCAB3Q8N7B9 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms