Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC38.17■■■■□ 3.7
RSPH3Q86UC2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC37.48■■■■□ 3.59
RSPH3Q86UC2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
RSPH3Q86UC2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
RSPH3Q86UC2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
RSPH3Q86UC2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.86■■■■□ 3.49
RSPH3Q86UC2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.83■■■■□ 3.49
RSPH3Q86UC2 AL356512.1-201ENST00000607453 1739 ntBASIC36.63■■■■□ 3.45
RSPH3Q86UC2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.95■■■■□ 3.35
RSPH3Q86UC2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.77■■■■□ 3.32
RSPH3Q86UC2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.74■■■■□ 3.31
RSPH3Q86UC2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC35.71■■■■□ 3.31
RSPH3Q86UC2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC35.66■■■■□ 3.3
RSPH3Q86UC2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC35.64■■■■□ 3.3
RSPH3Q86UC2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.58■■■■□ 3.29
RSPH3Q86UC2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC35.36■■■■□ 3.25
RSPH3Q86UC2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC35.35■■■■□ 3.25
RSPH3Q86UC2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
RSPH3Q86UC2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.23■■■■□ 3.23
RSPH3Q86UC2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.09■■■■□ 3.21
RSPH3Q86UC2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
RSPH3Q86UC2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
RSPH3Q86UC2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.93■■■■□ 3.18
RSPH3Q86UC2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
RSPH3Q86UC2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
RSPH3Q86UC2 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC34.71■■■■□ 3.15
RSPH3Q86UC2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC34.7■■■■□ 3.15
RSPH3Q86UC2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
RSPH3Q86UC2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
RSPH3Q86UC2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC34.45■■■■□ 3.11
RSPH3Q86UC2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
RSPH3Q86UC2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.2■■■■□ 3.07
RSPH3Q86UC2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
RSPH3Q86UC2 AC015813.7-201ENST00000623294 581 ntBASIC34.01■■■■□ 3.03
RSPH3Q86UC2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC34■■■■□ 3.03
RSPH3Q86UC2 AC006077.2-201ENST00000623591 457 ntBASIC34■■■■□ 3.03
RSPH3Q86UC2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.99■■■■□ 3.03
RSPH3Q86UC2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.98■■■■□ 3.03
RSPH3Q86UC2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
RSPH3Q86UC2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.94■■■■□ 3.02
RSPH3Q86UC2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.93■■■■□ 3.02
RSPH3Q86UC2 ZNRF2P1-201ENST00000441407 443 ntBASIC33.92■■■■□ 3.02
RSPH3Q86UC2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
RSPH3Q86UC2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.85■■■■□ 3.01
RSPH3Q86UC2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
RSPH3Q86UC2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.73■■■□□ 2.99
RSPH3Q86UC2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
RSPH3Q86UC2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC33.44■■■□□ 2.94
RSPH3Q86UC2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
RSPH3Q86UC2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC33.43■■■□□ 2.94
RSPH3Q86UC2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
RSPH3Q86UC2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
RSPH3Q86UC2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.1■■■□□ 2.89
RSPH3Q86UC2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.08■■■□□ 2.89
RSPH3Q86UC2 AP002365.1-201ENST00000603448 772 ntBASIC33.08■■■□□ 2.89
RSPH3Q86UC2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
RSPH3Q86UC2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
RSPH3Q86UC2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.02■■■□□ 2.88
RSPH3Q86UC2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.02■■■□□ 2.88
RSPH3Q86UC2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
RSPH3Q86UC2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.98■■■□□ 2.87
RSPH3Q86UC2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
RSPH3Q86UC2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
RSPH3Q86UC2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.94■■■□□ 2.86
RSPH3Q86UC2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.92■■■□□ 2.86
RSPH3Q86UC2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
RSPH3Q86UC2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
RSPH3Q86UC2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
RSPH3Q86UC2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.84■■■□□ 2.85
RSPH3Q86UC2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.84■■■□□ 2.85
RSPH3Q86UC2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.8■■■□□ 2.84
RSPH3Q86UC2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
RSPH3Q86UC2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.79■■■□□ 2.84
RSPH3Q86UC2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.77■■■□□ 2.84
RSPH3Q86UC2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.77■■■□□ 2.84
RSPH3Q86UC2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.77■■■□□ 2.84
RSPH3Q86UC2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.74■■■□□ 2.83
RSPH3Q86UC2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.72■■■□□ 2.83
RSPH3Q86UC2 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.7■■■□□ 2.83
RSPH3Q86UC2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
RSPH3Q86UC2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC32.69■■■□□ 2.82
RSPH3Q86UC2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.69■■■□□ 2.82
RSPH3Q86UC2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
RSPH3Q86UC2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.68■■■□□ 2.82
RSPH3Q86UC2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.66■■■□□ 2.82
RSPH3Q86UC2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC32.61■■■□□ 2.81
RSPH3Q86UC2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32.58■■■□□ 2.81
RSPH3Q86UC2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.55■■■□□ 2.8
RSPH3Q86UC2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.51■■■□□ 2.79
RSPH3Q86UC2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
RSPH3Q86UC2 DYNLL1-208ENST00000550178 581 ntBASIC32.5■■■□□ 2.79
RSPH3Q86UC2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
RSPH3Q86UC2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
RSPH3Q86UC2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.43■■■□□ 2.78
RSPH3Q86UC2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
RSPH3Q86UC2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
RSPH3Q86UC2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
RSPH3Q86UC2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
RSPH3Q86UC2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.32■■■□□ 2.76
RSPH3Q86UC2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.31■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms