Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.18■■■■□ 3.38
DENND1BQ6P3S1 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
DENND1BQ6P3S1 AL356512.1-201ENST00000607453 1739 ntBASIC35.31■■■■□ 3.24
DENND1BQ6P3S1 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.25■■■■□ 3.23
DENND1BQ6P3S1 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
DENND1BQ6P3S1 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
DENND1BQ6P3S1 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.82■■■■□ 3.16
DENND1BQ6P3S1 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.58■■■■□ 3.13
DENND1BQ6P3S1 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.52■■■■□ 3.12
DENND1BQ6P3S1 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.48■■■■□ 3.11
DENND1BQ6P3S1 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.33■■■■□ 3.09
DENND1BQ6P3S1 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.23■■■■□ 3.07
DENND1BQ6P3S1 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
DENND1BQ6P3S1 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.81■■■■□ 3
DENND1BQ6P3S1 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.8■■■■□ 3
DENND1BQ6P3S1 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.48■■■□□ 2.95
DENND1BQ6P3S1 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.39■■■□□ 2.94
DENND1BQ6P3S1 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.3■■■□□ 2.92
DENND1BQ6P3S1 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.91
DENND1BQ6P3S1 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.25■■■□□ 2.91
DENND1BQ6P3S1 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.25■■■□□ 2.91
DENND1BQ6P3S1 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.2■■■□□ 2.9
DENND1BQ6P3S1 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.12■■■□□ 2.89
DENND1BQ6P3S1 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.95■■■□□ 2.86
DENND1BQ6P3S1 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.93■■■□□ 2.86
DENND1BQ6P3S1 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.89■■■□□ 2.86
DENND1BQ6P3S1 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
DENND1BQ6P3S1 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
DENND1BQ6P3S1 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.8■■■□□ 2.84
DENND1BQ6P3S1 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
DENND1BQ6P3S1 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.5■■■□□ 2.79
DENND1BQ6P3S1 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.49■■■□□ 2.79
DENND1BQ6P3S1 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.35■■■□□ 2.77
DENND1BQ6P3S1 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
DENND1BQ6P3S1 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
DENND1BQ6P3S1 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
DENND1BQ6P3S1 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.33■■■□□ 2.77
DENND1BQ6P3S1 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
DENND1BQ6P3S1 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
DENND1BQ6P3S1 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
DENND1BQ6P3S1 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
DENND1BQ6P3S1 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
DENND1BQ6P3S1 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
DENND1BQ6P3S1 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
DENND1BQ6P3S1 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.02■■■□□ 2.72
DENND1BQ6P3S1 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32■■■□□ 2.71
DENND1BQ6P3S1 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
DENND1BQ6P3S1 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
DENND1BQ6P3S1 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
DENND1BQ6P3S1 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
DENND1BQ6P3S1 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.91■■■□□ 2.7
DENND1BQ6P3S1 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.91■■■□□ 2.7
DENND1BQ6P3S1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
DENND1BQ6P3S1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.68
DENND1BQ6P3S1 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
DENND1BQ6P3S1 AC015813.7-201ENST00000623294 581 ntBASIC31.64■■■□□ 2.66
DENND1BQ6P3S1 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
DENND1BQ6P3S1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.57■■■□□ 2.64
DENND1BQ6P3S1 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
DENND1BQ6P3S1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
DENND1BQ6P3S1 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
DENND1BQ6P3S1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
DENND1BQ6P3S1 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
DENND1BQ6P3S1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.38■■■□□ 2.61
DENND1BQ6P3S1 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.37■■■□□ 2.61
DENND1BQ6P3S1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.35■■■□□ 2.61
DENND1BQ6P3S1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
DENND1BQ6P3S1 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
DENND1BQ6P3S1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
DENND1BQ6P3S1 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
DENND1BQ6P3S1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
DENND1BQ6P3S1 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
DENND1BQ6P3S1 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.25■■■□□ 2.59
DENND1BQ6P3S1 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
DENND1BQ6P3S1 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.21■■■□□ 2.59
DENND1BQ6P3S1 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
DENND1BQ6P3S1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.2■■■□□ 2.58
DENND1BQ6P3S1 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
DENND1BQ6P3S1 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
DENND1BQ6P3S1 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
DENND1BQ6P3S1 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
DENND1BQ6P3S1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31■■■□□ 2.55
DENND1BQ6P3S1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
DENND1BQ6P3S1 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
DENND1BQ6P3S1 AC006077.2-201ENST00000623591 457 ntBASIC30.97■■■□□ 2.55
DENND1BQ6P3S1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
DENND1BQ6P3S1 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
DENND1BQ6P3S1 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
DENND1BQ6P3S1 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
DENND1BQ6P3S1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
DENND1BQ6P3S1 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
DENND1BQ6P3S1 ZNRF2P1-201ENST00000441407 443 ntBASIC30.82■■■□□ 2.52
DENND1BQ6P3S1 AC145285.7-201ENST00000614819 1539 ntBASIC30.79■■■□□ 2.52
DENND1BQ6P3S1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.78■■■□□ 2.52
DENND1BQ6P3S1 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
DENND1BQ6P3S1 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
DENND1BQ6P3S1 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
DENND1BQ6P3S1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.69■■■□□ 2.5
DENND1BQ6P3S1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
DENND1BQ6P3S1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 225.3 ms