Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
TBC1D28Q2M2D7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
TBC1D28Q2M2D7 AL356512.1-201ENST00000607453 1739 ntBASIC28.86■■■□□ 2.21
TBC1D28Q2M2D7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
TBC1D28Q2M2D7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TBC1D28Q2M2D7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TBC1D28Q2M2D7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC28.46■■■□□ 2.15
TBC1D28Q2M2D7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC28.45■■■□□ 2.14
TBC1D28Q2M2D7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC28.15■■■□□ 2.1
TBC1D28Q2M2D7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC28.1■■■□□ 2.09
TBC1D28Q2M2D7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC28■■■□□ 2.07
TBC1D28Q2M2D7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC27.97■■■□□ 2.07
TBC1D28Q2M2D7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC27.86■■■□□ 2.05
TBC1D28Q2M2D7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC27.77■■■□□ 2.04
TBC1D28Q2M2D7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
TBC1D28Q2M2D7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TBC1D28Q2M2D7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC27.45■■□□□ 1.98
TBC1D28Q2M2D7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
TBC1D28Q2M2D7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC27.3■■□□□ 1.96
TBC1D28Q2M2D7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
TBC1D28Q2M2D7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC27.19■■□□□ 1.94
TBC1D28Q2M2D7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
TBC1D28Q2M2D7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TBC1D28Q2M2D7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.91
TBC1D28Q2M2D7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.88■■□□□ 1.89
TBC1D28Q2M2D7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TBC1D28Q2M2D7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
TBC1D28Q2M2D7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
TBC1D28Q2M2D7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC26.75■■□□□ 1.87
TBC1D28Q2M2D7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
TBC1D28Q2M2D7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TBC1D28Q2M2D7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TBC1D28Q2M2D7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TBC1D28Q2M2D7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TBC1D28Q2M2D7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TBC1D28Q2M2D7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
TBC1D28Q2M2D7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TBC1D28Q2M2D7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC26.47■■□□□ 1.83
TBC1D28Q2M2D7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC26.45■■□□□ 1.83
TBC1D28Q2M2D7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TBC1D28Q2M2D7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TBC1D28Q2M2D7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC26.38■■□□□ 1.81
TBC1D28Q2M2D7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC26.37■■□□□ 1.81
TBC1D28Q2M2D7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TBC1D28Q2M2D7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TBC1D28Q2M2D7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
TBC1D28Q2M2D7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TBC1D28Q2M2D7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC26.23■■□□□ 1.79
TBC1D28Q2M2D7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
TBC1D28Q2M2D7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
TBC1D28Q2M2D7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC25.97■■□□□ 1.75
TBC1D28Q2M2D7 AC015813.7-201ENST00000623294 581 ntBASIC25.96■■□□□ 1.75
TBC1D28Q2M2D7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TBC1D28Q2M2D7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TBC1D28Q2M2D7 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
TBC1D28Q2M2D7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC25.86■■□□□ 1.73
TBC1D28Q2M2D7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC25.82■■□□□ 1.72
TBC1D28Q2M2D7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TBC1D28Q2M2D7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TBC1D28Q2M2D7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC25.77■■□□□ 1.72
TBC1D28Q2M2D7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC25.73■■□□□ 1.71
TBC1D28Q2M2D7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TBC1D28Q2M2D7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TBC1D28Q2M2D7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TBC1D28Q2M2D7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TBC1D28Q2M2D7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
TBC1D28Q2M2D7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TBC1D28Q2M2D7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TBC1D28Q2M2D7 AC006077.2-201ENST00000623591 457 ntBASIC25.58■■□□□ 1.69
TBC1D28Q2M2D7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TBC1D28Q2M2D7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TBC1D28Q2M2D7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TBC1D28Q2M2D7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
TBC1D28Q2M2D7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TBC1D28Q2M2D7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
TBC1D28Q2M2D7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TBC1D28Q2M2D7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.45■■□□□ 1.66
TBC1D28Q2M2D7 ZNRF2P1-201ENST00000441407 443 ntBASIC25.44■■□□□ 1.66
TBC1D28Q2M2D7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
TBC1D28Q2M2D7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.39■■□□□ 1.66
TBC1D28Q2M2D7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TBC1D28Q2M2D7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TBC1D28Q2M2D7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TBC1D28Q2M2D7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
TBC1D28Q2M2D7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TBC1D28Q2M2D7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TBC1D28Q2M2D7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.28■■□□□ 1.64
TBC1D28Q2M2D7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TBC1D28Q2M2D7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TBC1D28Q2M2D7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
TBC1D28Q2M2D7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
TBC1D28Q2M2D7 AC145285.7-201ENST00000614819 1539 ntBASIC25.17■■□□□ 1.62
TBC1D28Q2M2D7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
TBC1D28Q2M2D7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC25.14■■□□□ 1.62
TBC1D28Q2M2D7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
TBC1D28Q2M2D7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TBC1D28Q2M2D7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TBC1D28Q2M2D7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC25.11■■□□□ 1.61
TBC1D28Q2M2D7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TBC1D28Q2M2D7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms