Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC36.62■■■■□ 3.45
CDR1P51861 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.6■■■■□ 3.45
CDR1P51861 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
CDR1P51861 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.47■■■■□ 3.27
CDR1P51861 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
CDR1P51861 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
CDR1P51861 AL356512.1-201ENST00000607453 1739 ntBASIC35.39■■■■□ 3.26
CDR1P51861 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.36■■■■□ 3.25
CDR1P51861 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.81■■■■□ 3.16
CDR1P51861 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.47■■■■□ 3.11
CDR1P51861 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.39■■■■□ 3.1
CDR1P51861 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC34.3■■■■□ 3.08
CDR1P51861 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.29■■■■□ 3.08
CDR1P51861 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.13■■■■□ 3.05
CDR1P51861 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.09■■■■□ 3.05
CDR1P51861 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.09■■■■□ 3.05
CDR1P51861 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.01■■■■□ 3.03
CDR1P51861 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.97■■■■□ 3.03
CDR1P51861 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.95■■■■□ 3.03
CDR1P51861 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.86■■■■□ 3.01
CDR1P51861 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.85■■■■□ 3.01
CDR1P51861 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
CDR1P51861 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.57■■■□□ 2.96
CDR1P51861 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
CDR1P51861 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.4■■■□□ 2.94
CDR1P51861 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
CDR1P51861 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
CDR1P51861 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CDR1P51861 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CDR1P51861 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
CDR1P51861 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
CDR1P51861 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CDR1P51861 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CDR1P51861 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CDR1P51861 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
CDR1P51861 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.93■■■□□ 2.86
CDR1P51861 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.93■■■□□ 2.86
CDR1P51861 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
CDR1P51861 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.73■■■□□ 2.83
CDR1P51861 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.64■■■□□ 2.82
CDR1P51861 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.64■■■□□ 2.82
CDR1P51861 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.59■■■□□ 2.81
CDR1P51861 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.55■■■□□ 2.8
CDR1P51861 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
CDR1P51861 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CDR1P51861 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
CDR1P51861 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.45■■■□□ 2.79
CDR1P51861 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.44■■■□□ 2.78
CDR1P51861 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CDR1P51861 AC015813.7-201ENST00000623294 581 ntBASIC32.34■■■□□ 2.77
CDR1P51861 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CDR1P51861 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
CDR1P51861 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
CDR1P51861 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CDR1P51861 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CDR1P51861 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.2■■■□□ 2.75
CDR1P51861 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.2■■■□□ 2.75
CDR1P51861 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.1■■■□□ 2.73
CDR1P51861 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.05■■■□□ 2.72
CDR1P51861 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.03■■■□□ 2.72
CDR1P51861 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32■■■□□ 2.71
CDR1P51861 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.98■■■□□ 2.71
CDR1P51861 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.97■■■□□ 2.71
CDR1P51861 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
CDR1P51861 AC006077.2-201ENST00000623591 457 ntBASIC31.95■■■□□ 2.71
CDR1P51861 ZNRF2P1-201ENST00000441407 443 ntBASIC31.91■■■□□ 2.7
CDR1P51861 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
CDR1P51861 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CDR1P51861 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CDR1P51861 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CDR1P51861 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CDR1P51861 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CDR1P51861 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
CDR1P51861 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CDR1P51861 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CDR1P51861 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CDR1P51861 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CDR1P51861 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CDR1P51861 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.34■■■□□ 2.61
CDR1P51861 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.32■■■□□ 2.6
CDR1P51861 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CDR1P51861 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDR1P51861 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDR1P51861 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDR1P51861 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
CDR1P51861 AP002365.1-201ENST00000603448 772 ntBASIC31.2■■■□□ 2.59
CDR1P51861 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CDR1P51861 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.18■■■□□ 2.58
CDR1P51861 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.16■■■□□ 2.58
CDR1P51861 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.15■■■□□ 2.58
CDR1P51861 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDR1P51861 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
CDR1P51861 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CDR1P51861 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.13■■■□□ 2.57
CDR1P51861 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDR1P51861 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDR1P51861 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDR1P51861 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.08■■■□□ 2.57
CDR1P51861 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.07■■■□□ 2.56
CDR1P51861 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.05■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms