RNA–Protein interactions for RNA: YMR214W

SCJ1, Transcript of One of several homologs of bacterial chaperone DnaJ, yeastyeast

Gene SCJ1, Length 1,134 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCJ1YMR214W INO80P53115 1489 aa32.49■■■□□ 2.79
SCJ1YMR214W MON2P48563 1636 aaPredicted RBP32.37■■■□□ 2.77
SCJ1YMR214W DNA2P38859 1522 aa30.88■■■□□ 2.53
SCJ1YMR214W SWR1Q05471 1514 aa30.69■■■□□ 2.5
SCJ1YMR214W KOG1P38873 1557 aa30.42■■■□□ 2.46
SCJ1YMR214W TCB3Q03640 1545 aaKnown RBP30.32■■■□□ 2.44
SCJ1YMR214W TY1B-DR4Q07793 1604 aa30.18■■■□□ 2.42
SCJ1YMR214W RSE1Q04693 1361 aaKnown RBP30.15■■■□□ 2.42
SCJ1YMR214W SGS1P35187 1447 aa29.59■■■□□ 2.33
SCJ1YMR214W SPT6P23615 1451 aaKnown RBP29.14■■■□□ 2.26
SCJ1YMR214W HSL1P34244 1518 aa29.1■■■□□ 2.25
SCJ1YMR214W SPA2P23201 1466 aaKnown RBP28.97■■■□□ 2.23
SCJ1YMR214W ECM5Q03214 1411 aa28.72■■■□□ 2.19
SCJ1YMR214W MTC1P47018 478 aaKnown RBP28.67■■■□□ 2.18
SCJ1YMR214W HIR3P47171 1648 aa28.46■■■□□ 2.15
SCJ1YMR214W BUD4P47136 1447 aa28.43■■■□□ 2.14
SCJ1YMR214W THO2P53552 1597 aaKnown RBP28.38■■■□□ 2.13
SCJ1YMR214W MDS3P53094 1487 aa28.17■■■□□ 2.1
SCJ1YMR214W XRN1P22147 1528 aaKnown RBP27.92■■■□□ 2.06
SCJ1YMR214W PEP1P32319 1579 aa27.73■■■□□ 2.03
SCJ1YMR214W REV3P14284 1504 aa27.72■■■□□ 2.03
SCJ1YMR214W BPT1P14772 1559 aa27.52■■■□□ 2
SCJ1YMR214W ATG2P53855 1592 aa27.52■■■□□ 2
SCJ1YMR214W SKI3P17883 1432 aaKnown RBP27.21■■□□□ 1.95
SCJ1YMR214W TAF2P23255 1407 aa27.17■■□□□ 1.94
SCJ1YMR214W YCF1P39109 1515 aaKnown RBP27.01■■□□□ 1.91
SCJ1YMR214W SSN2P38931 1420 aa26.99■■□□□ 1.91
SCJ1YMR214W SSK2P53599 1579 aa26.96■■□□□ 1.91
SCJ1YMR214W SIN3P22579 1536 aa26.9■■□□□ 1.9
SCJ1YMR214W UFD4P33202 1483 aa26.67■■□□□ 1.86
SCJ1YMR214W ESP1Q03018 1630 aa26.65■■□□□ 1.86
SCJ1YMR214W MIF2P35201 549 aa26.49■■□□□ 1.83
SCJ1YMR214W RQC2Q12532 1038 aaKnown RBP26.36■■□□□ 1.81
SCJ1YMR214W SCC2Q04002 1493 aa26.35■■□□□ 1.81
SCJ1YMR214W YPK9Q12697 1472 aa26.3■■□□□ 1.8
SCJ1YMR214W MET5P47169 1442 aa26.29■■□□□ 1.8
SCJ1YMR214W DRS1P32892 752 aaKnown RBP26.28■■□□□ 1.8
SCJ1YMR214W CDC25P04821 1589 aa26.27■■□□□ 1.8
SCJ1YMR214W MYO2P19524 1574 aaKnown RBP26.27■■□□□ 1.8
SCJ1YMR214W CHD1P32657 1468 aa26.26■■□□□ 1.79
SCJ1YMR214W ESC1Q03661 1658 aaKnown RBP26.25■■□□□ 1.79
SCJ1YMR214W RPO31P04051 1460 aa26.16■■□□□ 1.78
SCJ1YMR214W DNF1P32660 1571 aa26.16■■□□□ 1.78
SCJ1YMR214W LTE1P07866 1435 aa26.14■■□□□ 1.78
SCJ1YMR214W RKR1Q04781 1562 aa26.01■■□□□ 1.75
SCJ1YMR214W TY2B-LR1P0C2J3 1770 aa26■■□□□ 1.75
SCJ1YMR214W TY2B-FP0CX63 1770 aa26■■□□□ 1.75
SCJ1YMR214W TY2B-GR2P0CX64 1770 aa26■■□□□ 1.75
SCJ1YMR214W TY2B-CP25384 1770 aa26■■□□□ 1.75
SCJ1YMR214W TY2B-DR2Q03494 1770 aa26■■□□□ 1.75
SCJ1YMR214W TY1B-DR1Q03855 1755 aa26■■□□□ 1.75
SCJ1YMR214W TY2B-DR3Q07791 1770 aaKnown RBP26■■□□□ 1.75
SCJ1YMR214W TY2B-OR1Q12113 1770 aa26■■□□□ 1.75
SCJ1YMR214W TY2B-DR1Q12472 1770 aa26■■□□□ 1.75
SCJ1YMR214W TY2B-OR2Q12501 1770 aa26■■□□□ 1.75
SCJ1YMR214W PAN1P32521 1480 aa26■■□□□ 1.75
SCJ1YMR214W RPA190P10964 1664 aaKnown RBP25.96■■□□□ 1.75
SCJ1YMR214W TY1B-BRQ12193 1756 aa25.95■■□□□ 1.74
SCJ1YMR214W TY1B-GR3Q12316 1755 aa25.95■■□□□ 1.74
SCJ1YMR214W TY1B-ORQ92393 1755 aa25.95■■□□□ 1.74
SCJ1YMR214W GEA2P39993 1459 aaKnown RBP25.84■■□□□ 1.73
SCJ1YMR214W ABP1P15891 592 aaKnown RBP25.8■■□□□ 1.72
SCJ1YMR214W BNI1P41832 1953 aa25.8■■□□□ 1.72
SCJ1YMR214W ITT1Q04638 464 aa25.78■■□□□ 1.72
SCJ1YMR214W TOP2P06786 1428 aaKnown RBP25.72■■□□□ 1.71
SCJ1YMR214W TY2B-BQ12491 1770 aa25.67■■□□□ 1.7
SCJ1YMR214W TRM732Q03496 1420 aa25.66■■□□□ 1.7
SCJ1YMR214W MMS22Q06164 1454 aa25.66■■□□□ 1.7
SCJ1YMR214W TY1B-HO13535 1793 aa25.65■■□□□ 1.7
SCJ1YMR214W TY1B-DR5P0C2I2 1755 aa25.65■■□□□ 1.7
SCJ1YMR214W TY1B-DR6P0C2I3 1755 aa25.65■■□□□ 1.7
SCJ1YMR214W TY1B-LR2P0C2I5 1755 aa25.65■■□□□ 1.7
SCJ1YMR214W TY1B-LR3P0C2I6 1755 aaKnown RBP25.65■■□□□ 1.7
SCJ1YMR214W TY1B-PR1P0C2I9 1755 aaKnown RBP25.65■■□□□ 1.7
SCJ1YMR214W TY1B-PR2P0C2J0 1756 aa25.65■■□□□ 1.7
SCJ1YMR214W TY1B-PR3P0C2J1 1755 aaKnown RBP25.65■■□□□ 1.7
SCJ1YMR214W TY1B-JR1P47098 1755 aa25.65■■□□□ 1.7
SCJ1YMR214W TY1B-ML2Q03434 1755 aaKnown RBP25.65■■□□□ 1.7
SCJ1YMR214W TY1B-ER1Q03612 1755 aa25.65■■□□□ 1.7
SCJ1YMR214W TY1B-ML1Q04711 1755 aaKnown RBP25.65■■□□□ 1.7
SCJ1YMR214W TY1B-GR2Q12269 1755 aa25.65■■□□□ 1.7
SCJ1YMR214W TY1B-OLQ12273 1755 aa25.65■■□□□ 1.7
SCJ1YMR214W TY1B-PLQ12414 1755 aaKnown RBP25.65■■□□□ 1.7
SCJ1YMR214W YFR006WP43590 535 aa25.58■■□□□ 1.69
SCJ1YMR214W MMS1Q06211 1407 aa25.54■■□□□ 1.68
SCJ1YMR214W TY1B-DR3Q99231 1755 aa25.54■■□□□ 1.68
SCJ1YMR214W DRS2P39524 1355 aa25.44■■□□□ 1.66
SCJ1YMR214W NUP159P40477 1460 aa25.37■■□□□ 1.65
SCJ1YMR214W VPS15P22219 1454 aa25.34■■□□□ 1.65
SCJ1YMR214W YRF1-1P0CX20 1796 aa25.33■■□□□ 1.65
SCJ1YMR214W YRF1-5P0CX21 1796 aa25.33■■□□□ 1.65
SCJ1YMR214W YRF1-8P0CX22 1796 aa25.33■■□□□ 1.65
SCJ1YMR214W POL1P13382 1468 aa25.29■■□□□ 1.64
SCJ1YMR214W SPP41P38904 1435 aa25.28■■□□□ 1.64
SCJ1YMR214W SMC4Q12267 1418 aa25.23■■□□□ 1.63
SCJ1YMR214W YOR1P53049 1477 aa25.17■■□□□ 1.62
SCJ1YMR214W NTE1Q04958 1679 aa25.17■■□□□ 1.62
SCJ1YMR214W STU1P38198 1513 aa25.13■■□□□ 1.61
SCJ1YMR214W IRC20Q06554 1556 aa25.13■■□□□ 1.61
SCJ1YMR214W TY1B-JR2P47100 1755 aaKnown RBP25.11■■□□□ 1.61
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms