RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeastyeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB1YMR296C MON2P48563 1636 aaPredicted RBP22.11■■□□□ 1.13
LCB1YMR296C INO80P53115 1489 aa22.02■■□□□ 1.12
LCB1YMR296C SGS1P35187 1447 aa21.46■■□□□ 1.03
LCB1YMR296C TCB3Q03640 1545 aaKnown RBP21.42■■□□□ 1.02
LCB1YMR296C TY1B-DR4Q07793 1604 aa21.32■■□□□ 1
LCB1YMR296C SWR1Q05471 1514 aa21.27■■□□□ 1
LCB1YMR296C DNA2P38859 1522 aa21.04■□□□□ 0.96
LCB1YMR296C KOG1P38873 1557 aa20.79■□□□□ 0.92
LCB1YMR296C HSL1P34244 1518 aa20.69■□□□□ 0.9
LCB1YMR296C SPT6P23615 1451 aaKnown RBP20.63■□□□□ 0.89
LCB1YMR296C SPA2P23201 1466 aaKnown RBP20.42■□□□□ 0.86
LCB1YMR296C HIR3P47171 1648 aa20.27■□□□□ 0.84
LCB1YMR296C SSN2P38931 1420 aa20.03■□□□□ 0.8
LCB1YMR296C ECM5Q03214 1411 aa19.97■□□□□ 0.79
LCB1YMR296C XRN1P22147 1528 aaKnown RBP19.96■□□□□ 0.79
LCB1YMR296C RSE1Q04693 1361 aaKnown RBP19.91■□□□□ 0.78
LCB1YMR296C THO2P53552 1597 aaKnown RBP19.9■□□□□ 0.78
LCB1YMR296C BUD4P47136 1447 aa19.89■□□□□ 0.77
LCB1YMR296C MDS3P53094 1487 aa19.65■□□□□ 0.74
LCB1YMR296C REV3P14284 1504 aa19.63■□□□□ 0.73
LCB1YMR296C PEP1P32319 1579 aa19.55■□□□□ 0.72
LCB1YMR296C ATG2P53855 1592 aa19.52■□□□□ 0.71
LCB1YMR296C SIN3P22579 1536 aa19.44■□□□□ 0.7
LCB1YMR296C TAF2P23255 1407 aa19.37■□□□□ 0.69
LCB1YMR296C DRS1P32892 752 aaKnown RBP19.32■□□□□ 0.68
LCB1YMR296C SSK2P53599 1579 aa19.29■□□□□ 0.68
LCB1YMR296C SKI3P17883 1432 aaKnown RBP19.23■□□□□ 0.67
LCB1YMR296C ESP1Q03018 1630 aa19.17■□□□□ 0.66
LCB1YMR296C MTC1P47018 478 aaKnown RBP19.12■□□□□ 0.65
LCB1YMR296C BPT1P14772 1559 aa19.08■□□□□ 0.65
LCB1YMR296C MYO2P19524 1574 aaKnown RBP18.94■□□□□ 0.62
LCB1YMR296C YPK9Q12697 1472 aa18.91■□□□□ 0.62
LCB1YMR296C UFD4P33202 1483 aa18.86■□□□□ 0.61
LCB1YMR296C SCC2Q04002 1493 aa18.86■□□□□ 0.61
LCB1YMR296C YCF1P39109 1515 aaKnown RBP18.77■□□□□ 0.6
LCB1YMR296C RPO31P04051 1460 aa18.75■□□□□ 0.59
LCB1YMR296C TY2B-LR1P0C2J3 1770 aa18.61■□□□□ 0.57
LCB1YMR296C TY2B-FP0CX63 1770 aa18.61■□□□□ 0.57
LCB1YMR296C TY2B-GR2P0CX64 1770 aa18.61■□□□□ 0.57
LCB1YMR296C TY2B-CP25384 1770 aa18.61■□□□□ 0.57
LCB1YMR296C TY2B-DR2Q03494 1770 aa18.61■□□□□ 0.57
LCB1YMR296C TY1B-DR1Q03855 1755 aa18.61■□□□□ 0.57
LCB1YMR296C TY2B-DR3Q07791 1770 aaKnown RBP18.61■□□□□ 0.57
LCB1YMR296C TY2B-OR1Q12113 1770 aa18.61■□□□□ 0.57
LCB1YMR296C TY2B-DR1Q12472 1770 aa18.61■□□□□ 0.57
LCB1YMR296C TY2B-OR2Q12501 1770 aa18.61■□□□□ 0.57
LCB1YMR296C CDC25P04821 1589 aa18.5■□□□□ 0.55
LCB1YMR296C CHD1P32657 1468 aa18.5■□□□□ 0.55
LCB1YMR296C TOP2P06786 1428 aaKnown RBP18.49■□□□□ 0.55
LCB1YMR296C POL1P13382 1468 aa18.48■□□□□ 0.55
LCB1YMR296C TY1B-BRQ12193 1756 aa18.47■□□□□ 0.55
LCB1YMR296C TY1B-GR3Q12316 1755 aa18.47■□□□□ 0.55
LCB1YMR296C TY1B-ORQ92393 1755 aa18.47■□□□□ 0.55
LCB1YMR296C RKR1Q04781 1562 aa18.46■□□□□ 0.54
LCB1YMR296C TY2B-BQ12491 1770 aa18.4■□□□□ 0.54
LCB1YMR296C TY1B-DR3Q99231 1755 aa18.39■□□□□ 0.54
LCB1YMR296C DNF1P32660 1571 aa18.37■□□□□ 0.53
LCB1YMR296C RQC2Q12532 1038 aaKnown RBP18.35■□□□□ 0.53
LCB1YMR296C ESC1Q03661 1658 aaKnown RBP18.35■□□□□ 0.53
LCB1YMR296C STU1P38198 1513 aa18.35■□□□□ 0.53
LCB1YMR296C PAN1P32521 1480 aa18.34■□□□□ 0.53
LCB1YMR296C TY1B-HO13535 1793 aa18.34■□□□□ 0.53
LCB1YMR296C TY1B-DR5P0C2I2 1755 aa18.34■□□□□ 0.53
LCB1YMR296C TY1B-DR6P0C2I3 1755 aa18.34■□□□□ 0.53
LCB1YMR296C TY1B-LR2P0C2I5 1755 aa18.34■□□□□ 0.53
LCB1YMR296C TY1B-LR3P0C2I6 1755 aaKnown RBP18.34■□□□□ 0.53
LCB1YMR296C TY1B-PR1P0C2I9 1755 aaKnown RBP18.34■□□□□ 0.53
LCB1YMR296C TY1B-PR2P0C2J0 1756 aa18.34■□□□□ 0.53
LCB1YMR296C TY1B-PR3P0C2J1 1755 aaKnown RBP18.34■□□□□ 0.53
LCB1YMR296C TY1B-JR1P47098 1755 aa18.34■□□□□ 0.53
LCB1YMR296C TY1B-ML2Q03434 1755 aaKnown RBP18.34■□□□□ 0.53
LCB1YMR296C TY1B-ER1Q03612 1755 aa18.34■□□□□ 0.53
LCB1YMR296C TY1B-ML1Q04711 1755 aaKnown RBP18.34■□□□□ 0.53
LCB1YMR296C TY1B-GR2Q12269 1755 aa18.34■□□□□ 0.53
LCB1YMR296C TY1B-OLQ12273 1755 aa18.34■□□□□ 0.53
LCB1YMR296C TY1B-PLQ12414 1755 aaKnown RBP18.34■□□□□ 0.53
LCB1YMR296C YOR1P53049 1477 aa18.3■□□□□ 0.52
LCB1YMR296C SMC4Q12267 1418 aa18.26■□□□□ 0.51
LCB1YMR296C MMS22Q06164 1454 aa18.25■□□□□ 0.51
LCB1YMR296C RPA190P10964 1664 aaKnown RBP18.22■□□□□ 0.51
LCB1YMR296C MET5P47169 1442 aa18.19■□□□□ 0.5
LCB1YMR296C SPP41P38904 1435 aa18.1■□□□□ 0.49
LCB1YMR296C TRM732Q03496 1420 aa18.06■□□□□ 0.48
LCB1YMR296C TY1B-JR2P47100 1755 aaKnown RBP17.99■□□□□ 0.47
LCB1YMR296C TY1B-ER2Q03619 1755 aa17.99■□□□□ 0.47
LCB1YMR296C TY1B-MR1Q04214 1755 aa17.99■□□□□ 0.47
LCB1YMR296C TY1B-MR2Q04670 1755 aaKnown RBP17.99■□□□□ 0.47
LCB1YMR296C TY1B-LR1Q12088 1755 aaKnown RBP17.99■□□□□ 0.47
LCB1YMR296C TY1B-NL1Q12112 1755 aa17.99■□□□□ 0.47
LCB1YMR296C TY1B-GR1Q12141 1755 aa17.99■□□□□ 0.47
LCB1YMR296C TY1B-BLQ12490 1755 aa17.99■□□□□ 0.47
LCB1YMR296C TSC11P40061 1430 aa17.97■□□□□ 0.47
LCB1YMR296C YTA7P40340 1379 aa17.97■□□□□ 0.47
LCB1YMR296C VTH1P40438 1549 aa17.96■□□□□ 0.47
LCB1YMR296C VTH2P40890 1549 aa17.96■□□□□ 0.47
LCB1YMR296C MYO4P32492 1471 aa17.94■□□□□ 0.46
LCB1YMR296C LTE1P07866 1435 aa17.91■□□□□ 0.46
LCB1YMR296C NUP159P40477 1460 aa17.88■□□□□ 0.45
LCB1YMR296C NTE1Q04958 1679 aa17.88■□□□□ 0.45
LCB1YMR296C YRF1-1P0CX20 1796 aa17.86■□□□□ 0.45
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms