RNA–Protein interactions for RNA: YDR266C

HEL2, Transcript of RING finger ubiquitin ligase (E3), yeast

Gene HEL2, Length 1,920 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HEL2	YDR266C	BFR2	Q06631	534 aa	Known RBP	14.7	□□□□□ -0.06
HEL2	YDR266C	RQC2	Q12532	1038 aa	Known RBP	14.4	□□□□□ -0.1
HEL2	YDR266C	NOP2	P40991	618 aa	Known RBP	13.88	□□□□□ -0.19
HEL2	YDR266C	EBP2	P36049	427 aa	Known RBP	13.42	□□□□□ -0.26
HEL2	YDR266C	CAB3	P36076	571 aa		13.4	□□□□□ -0.26
HEL2	YDR266C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	13.37	□□□□□ -0.27	not detected
HEL2	YDR266C	SPA2	P23201	1466 aa	Known RBP	13.22	□□□□□ -0.29
HEL2	YDR266C	SKI3	P17883	1432 aa	Known RBP	13.19	□□□□□ -0.3
HEL2	YDR266C	URN1	Q06525	465 aa	Known RBP	13.17	□□□□□ -0.3
HEL2	YDR266C	SIS2	P36024	562 aa		13.05	□□□□□ -0.32
HEL2	YDR266C	YPR148C	Q06523	435 aa		12.88	□□□□□ -0.35
HEL2	YDR266C	SSN2	P38931	1420 aa		12.87	□□□□□ -0.35
HEL2	YDR266C	SGS1	P35187	1447 aa		12.75	□□□□□ -0.37
HEL2	YDR266C	TAF7	Q05021	590 aa		12.61	□□□□□ -0.39
HEL2	YDR266C	AVT3	P36062	692 aa		12.54	□□□□□ -0.4
HEL2	YDR266C	ENP1	P38333	483 aa	Known RBP	12.54	□□□□□ -0.4
HEL2	YDR266C	TCB3	Q03640	1545 aa	Known RBP	12.54	□□□□□ -0.4
HEL2	YDR266C	DRS1	P32892	752 aa	Known RBP	12.51	□□□□□ -0.41
HEL2	YDR266C	YFR016C	P43597	1233 aa	Known RBP	12.5	□□□□□ -0.41
HEL2	YDR266C	TCB2	P48231	1178 aa		12.43	□□□□□ -0.42
HEL2	YDR266C	RPS0B	P46654	252 aa	Known RBP	12.35	□□□□□ -0.43
HEL2	YDR266C	MNN4	P36044	1178 aa		12.28	□□□□□ -0.44
HEL2	YDR266C	STH1	P32597	1359 aa		12.26	□□□□□ -0.45
HEL2	YDR266C	CHD1	P32657	1468 aa		12.23	□□□□□ -0.45
HEL2	YDR266C	MMS22	Q06164	1454 aa		12.23	□□□□□ -0.45
HEL2	YDR266C	TFA1	P36100	482 aa		12.22	□□□□□ -0.45
HEL2	YDR266C	CLC1	P17891	233 aa		12.19	□□□□□ -0.46
HEL2	YDR266C	UFD4	P33202	1483 aa		12.18	□□□□□ -0.46
HEL2	YDR266C	RSE1	Q04693	1361 aa	Known RBP	12.16	□□□□□ -0.46
HEL2	YDR266C	CWC22	P53333	577 aa	Known RBP	12.15	□□□□□ -0.46
HEL2	YDR266C	LEO1	P38439	464 aa		12.15	□□□□□ -0.46
HEL2	YDR266C	SEC3	P33332	1336 aa	Known RBP	12.13	□□□□□ -0.47
HEL2	YDR266C	IME2	P32581	645 aa		12.11	□□□□□ -0.47
HEL2	YDR266C	PRS1	P32895	427 aa	Known RBP	12.09	□□□□□ -0.47
HEL2	YDR266C	AIM44	Q99299	758 aa		12.09	□□□□□ -0.47
HEL2	YDR266C	SPT7	P35177	1332 aa		12.08	□□□□□ -0.48
HEL2	YDR266C	QCR6	P00127	147 aa		12.06	□□□□□ -0.48
HEL2	YDR266C	POL5	P39985	1022 aa	Known RBP	12.06	□□□□□ -0.48
HEL2	YDR266C	SPP41	P38904	1435 aa		12.06	□□□□□ -0.48
HEL2	YDR266C	XRN1	P22147	1528 aa	Known RBP	12.03	□□□□□ -0.48
HEL2	YDR266C	INO80	P53115	1489 aa		12.02	□□□□□ -0.48
HEL2	YDR266C	DIP2	Q12220	943 aa	Predicted RBP	12.02	□□□□□ -0.49
HEL2	YDR266C	RLF2	Q12495	606 aa		12.02	□□□□□ -0.49
HEL2	YDR266C	ECM5	Q03214	1411 aa		11.99	□□□□□ -0.49
HEL2	YDR266C	KRI1	P42846	591 aa	Known RBP	11.99	□□□□□ -0.49
HEL2	YDR266C	NOP53	Q12080	455 aa	Known RBP	11.98	□□□□□ -0.49
HEL2	YDR266C	FPR3	P38911	411 aa	Known RBP	11.97	□□□□□ -0.49
HEL2	YDR266C	YGR130C	P53278	816 aa		11.96	□□□□□ -0.49
HEL2	YDR266C	MON2	P48563	1636 aa	Predicted RBP	11.95	□□□□□ -0.5
HEL2	YDR266C	YRB30	P53107	440 aa	Predicted RBP	11.93	□□□□□ -0.5
HEL2	YDR266C	ENV11	P53246	860 aa		11.93	□□□□□ -0.5
HEL2	YDR266C	NUG1	P40010	520 aa	Known RBP	11.92	□□□□□ -0.5
HEL2	YDR266C	OPY1	P38271	328 aa		11.92	□□□□□ -0.5
HEL2	YDR266C	EAF7	P53911	425 aa	Known RBP	11.89	□□□□□ -0.51
HEL2	YDR266C	TRM732	Q03496	1420 aa		11.89	□□□□□ -0.51
HEL2	YDR266C	DEF1	P35732	738 aa	Known RBP	11.88	□□□□□ -0.51
HEL2	YDR266C	IKI3	Q06706	1349 aa	Known RBP	11.86	□□□□□ -0.51
HEL2	YDR266C	SPT21	P35209	758 aa		11.84	□□□□□ -0.51
HEL2	YDR266C	CFT1	Q06632	1357 aa	Known RBP	11.82	□□□□□ -0.52
HEL2	YDR266C	SNF7	P39929	240 aa	Known RBP	11.78	□□□□□ -0.52
HEL2	YDR266C	RNA1	P11745	407 aa	Known RBP	11.76	□□□□□ -0.53
HEL2	YDR266C	FPR4	Q06205	392 aa	Predicted RBP	11.76	□□□□□ -0.53
HEL2	YDR266C	PEP1	P32319	1579 aa		11.75	□□□□□ -0.53
HEL2	YDR266C	RPC31	P17890	251 aa		11.75	□□□□□ -0.53
HEL2	YDR266C	RIX1	P38883	763 aa	Predicted RBP	11.74	□□□□□ -0.53
HEL2	YDR266C	MTC1	P47018	478 aa	Known RBP	11.73	□□□□□ -0.53
HEL2	YDR266C	SAS10	Q12136	610 aa	Predicted RBP	11.72	□□□□□ -0.53
HEL2	YDR266C	SRB8	P25648	1427 aa		11.7	□□□□□ -0.54
HEL2	YDR266C	BUD4	P47136	1447 aa		11.7	□□□□□ -0.54
HEL2	YDR266C	PAF1	P38351	445 aa		11.7	□□□□□ -0.54
HEL2	YDR266C	TOP2	P06786	1428 aa	Known RBP	11.7	□□□□□ -0.54
HEL2	YDR266C	SSM4	P40318	1319 aa		11.64	□□□□□ -0.55
HEL2	YDR266C	SPT2	P06843	333 aa	Predicted RBP	11.64	□□□□□ -0.55
HEL2	YDR266C	SPC110	P32380	944 aa		11.64	□□□□□ -0.55
HEL2	YDR266C	PDR10	P51533	1564 aa		11.64	□□□□□ -0.55
HEL2	YDR266C	YTA7	P40340	1379 aa		11.63	□□□□□ -0.55
HEL2	YDR266C	ROX1	P25042	368 aa		11.62	□□□□□ -0.55
HEL2	YDR266C	YLR419W	Q06698	1435 aa	Known RBP	11.62	□□□□□ -0.55
HEL2	YDR266C	FUN12	P39730	1002 aa	Known RBP	11.6	□□□□□ -0.55
HEL2	YDR266C	PSH1	Q12161	406 aa		11.6	□□□□□ -0.55
HEL2	YDR266C	NAP1	P25293	417 aa	Known RBP	11.59	□□□□□ -0.55
HEL2	YDR266C	NUP170	P38181	1502 aa		11.58	□□□□□ -0.55
HEL2	YDR266C	LEU3	P08638	886 aa		11.58	□□□□□ -0.55
HEL2	YDR266C	RTT106	P40161	455 aa		11.58	□□□□□ -0.55
HEL2	YDR266C	NOP58	Q12499	511 aa	Known RBP	11.57	□□□□□ -0.56
HEL2	YDR266C	MMS1	Q06211	1407 aa		11.57	□□□□□ -0.56
HEL2	YDR266C	NMD2	P38798	1089 aa	Known RBP	11.56	□□□□□ -0.56
HEL2	YDR266C	MYO2	P19524	1574 aa	Known RBP	11.55	□□□□□ -0.56
HEL2	YDR266C	HSP82	P02829	709 aa	Known RBP	11.54	□□□□□ -0.56
HEL2	YDR266C	CTR9	P89105	1077 aa		11.54	□□□□□ -0.56
HEL2	YDR266C	SLN1	P39928	1220 aa	Predicted RBP	11.53	□□□□□ -0.56
HEL2	YDR266C	PLP2	Q12017	286 aa		11.52	□□□□□ -0.56
HEL2	YDR266C	YIR014W	P40570	242 aa		11.51	□□□□□ -0.57
HEL2	YDR266C	RAD26	P40352	1085 aa		11.5	□□□□□ -0.57
HEL2	YDR266C	THO2	P53552	1597 aa	Known RBP	11.5	□□□□□ -0.57
HEL2	YDR266C	SMC3	P47037	1230 aa		11.49	□□□□□ -0.57
HEL2	YDR266C	MYO4	P32492	1471 aa		11.48	□□□□□ -0.57
HEL2	YDR266C	PSD2	P53037	1138 aa	Known RBP	11.47	□□□□□ -0.57
HEL2	YDR266C	YNL011C	P53980	444 aa		11.46	□□□□□ -0.58
HEL2	YDR266C	YPK9	Q12697	1472 aa		11.46	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms