RNA–Protein interactions for RNA: YDL130W

RPP1B, Transcript of Ribosomal protein P1 beta, yeastyeast

Gene RPP1B, Length 321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP1BYDL130W INO80P53115 1489 aa30.69■■■□□ 2.5
RPP1BYDL130W MON2P48563 1636 aaPredicted RBP30.68■■■□□ 2.5
RPP1BYDL130W SGS1P35187 1447 aa29.84■■■□□ 2.37
RPP1BYDL130W TCB3Q03640 1545 aaKnown RBP29.78■■■□□ 2.36
RPP1BYDL130W TY1B-DR4Q07793 1604 aa29.53■■■□□ 2.32
RPP1BYDL130W SWR1Q05471 1514 aa29.53■■■□□ 2.32
RPP1BYDL130W DNA2P38859 1522 aa29.25■■■□□ 2.27
RPP1BYDL130W KOG1P38873 1557 aa28.93■■■□□ 2.22
RPP1BYDL130W HSL1P34244 1518 aa28.71■■■□□ 2.19
RPP1BYDL130W SPT6P23615 1451 aaKnown RBP28.68■■■□□ 2.18
RPP1BYDL130W SPA2P23201 1466 aaKnown RBP28.48■■■□□ 2.15
RPP1BYDL130W HIR3P47171 1648 aa28.12■■■□□ 2.09
RPP1BYDL130W RSE1Q04693 1361 aaKnown RBP27.82■■■□□ 2.04
RPP1BYDL130W SSN2P38931 1420 aa27.8■■■□□ 2.04
RPP1BYDL130W ECM5Q03214 1411 aa27.78■■■□□ 2.04
RPP1BYDL130W XRN1P22147 1528 aaKnown RBP27.74■■■□□ 2.03
RPP1BYDL130W BUD4P47136 1447 aa27.67■■■□□ 2.02
RPP1BYDL130W THO2P53552 1597 aaKnown RBP27.66■■■□□ 2.02
RPP1BYDL130W MDS3P53094 1487 aa27.31■■□□□ 1.96
RPP1BYDL130W REV3P14284 1504 aa27.26■■□□□ 1.95
RPP1BYDL130W PEP1P32319 1579 aa27.09■■□□□ 1.93
RPP1BYDL130W ATG2P53855 1592 aa27.05■■□□□ 1.92
RPP1BYDL130W DRS1P32892 752 aaKnown RBP26.97■■□□□ 1.91
RPP1BYDL130W TAF2P23255 1407 aa26.97■■□□□ 1.91
RPP1BYDL130W SIN3P22579 1536 aa26.95■■□□□ 1.91
RPP1BYDL130W SKI3P17883 1432 aaKnown RBP26.81■■□□□ 1.88
RPP1BYDL130W MTC1P47018 478 aaKnown RBP26.8■■□□□ 1.88
RPP1BYDL130W SSK2P53599 1579 aa26.75■■□□□ 1.87
RPP1BYDL130W ESP1Q03018 1630 aa26.58■■□□□ 1.85
RPP1BYDL130W BPT1P14772 1559 aa26.55■■□□□ 1.84
RPP1BYDL130W MYO2P19524 1574 aaKnown RBP26.33■■□□□ 1.8
RPP1BYDL130W YPK9Q12697 1472 aa26.28■■□□□ 1.8
RPP1BYDL130W UFD4P33202 1483 aa26.24■■□□□ 1.79
RPP1BYDL130W SCC2Q04002 1493 aa26.18■■□□□ 1.78
RPP1BYDL130W YCF1P39109 1515 aaKnown RBP26.11■■□□□ 1.77
RPP1BYDL130W RPO31P04051 1460 aa26.04■■□□□ 1.76
RPP1BYDL130W TY2B-LR1P0C2J3 1770 aa25.74■■□□□ 1.71
RPP1BYDL130W TY2B-FP0CX63 1770 aa25.74■■□□□ 1.71
RPP1BYDL130W TY2B-GR2P0CX64 1770 aa25.74■■□□□ 1.71
RPP1BYDL130W TY2B-CP25384 1770 aa25.74■■□□□ 1.71
RPP1BYDL130W TY2B-DR2Q03494 1770 aa25.74■■□□□ 1.71
RPP1BYDL130W TY1B-DR1Q03855 1755 aa25.74■■□□□ 1.71
RPP1BYDL130W TY2B-DR3Q07791 1770 aaKnown RBP25.74■■□□□ 1.71
RPP1BYDL130W TY2B-OR1Q12113 1770 aa25.74■■□□□ 1.71
RPP1BYDL130W TY2B-DR1Q12472 1770 aa25.74■■□□□ 1.71
RPP1BYDL130W TY2B-OR2Q12501 1770 aa25.74■■□□□ 1.71
RPP1BYDL130W CHD1P32657 1468 aa25.72■■□□□ 1.71
RPP1BYDL130W TOP2P06786 1428 aaKnown RBP25.71■■□□□ 1.71
RPP1BYDL130W CDC25P04821 1589 aa25.7■■□□□ 1.71
RPP1BYDL130W RQC2Q12532 1038 aaKnown RBP25.7■■□□□ 1.7
RPP1BYDL130W POL1P13382 1468 aa25.66■■□□□ 1.7
RPP1BYDL130W RKR1Q04781 1562 aa25.65■■□□□ 1.7
RPP1BYDL130W TY1B-BRQ12193 1756 aa25.55■■□□□ 1.68
RPP1BYDL130W TY1B-GR3Q12316 1755 aa25.55■■□□□ 1.68
RPP1BYDL130W TY1B-ORQ92393 1755 aa25.55■■□□□ 1.68
RPP1BYDL130W PAN1P32521 1480 aa25.51■■□□□ 1.67
RPP1BYDL130W STU1P38198 1513 aa25.5■■□□□ 1.67
RPP1BYDL130W ESC1Q03661 1658 aaKnown RBP25.48■■□□□ 1.67
RPP1BYDL130W DNF1P32660 1571 aa25.48■■□□□ 1.67
RPP1BYDL130W TY2B-BQ12491 1770 aa25.45■■□□□ 1.66
RPP1BYDL130W TY1B-DR3Q99231 1755 aa25.44■■□□□ 1.66
RPP1BYDL130W YOR1P53049 1477 aa25.43■■□□□ 1.66
RPP1BYDL130W MMS22Q06164 1454 aa25.4■■□□□ 1.66
RPP1BYDL130W SMC4Q12267 1418 aa25.39■■□□□ 1.66
RPP1BYDL130W TY1B-HO13535 1793 aa25.37■■□□□ 1.65
RPP1BYDL130W TY1B-DR5P0C2I2 1755 aa25.37■■□□□ 1.65
RPP1BYDL130W TY1B-DR6P0C2I3 1755 aa25.37■■□□□ 1.65
RPP1BYDL130W TY1B-LR2P0C2I5 1755 aa25.37■■□□□ 1.65
RPP1BYDL130W TY1B-LR3P0C2I6 1755 aaKnown RBP25.37■■□□□ 1.65
RPP1BYDL130W TY1B-PR1P0C2I9 1755 aaKnown RBP25.37■■□□□ 1.65
RPP1BYDL130W TY1B-PR2P0C2J0 1756 aa25.37■■□□□ 1.65
RPP1BYDL130W TY1B-PR3P0C2J1 1755 aaKnown RBP25.37■■□□□ 1.65
RPP1BYDL130W TY1B-JR1P47098 1755 aa25.37■■□□□ 1.65
RPP1BYDL130W TY1B-ML2Q03434 1755 aaKnown RBP25.37■■□□□ 1.65
RPP1BYDL130W TY1B-ER1Q03612 1755 aa25.37■■□□□ 1.65
RPP1BYDL130W TY1B-ML1Q04711 1755 aaKnown RBP25.37■■□□□ 1.65
RPP1BYDL130W TY1B-GR2Q12269 1755 aa25.37■■□□□ 1.65
RPP1BYDL130W TY1B-OLQ12273 1755 aa25.37■■□□□ 1.65
RPP1BYDL130W TY1B-PLQ12414 1755 aaKnown RBP25.37■■□□□ 1.65
RPP1BYDL130W MET5P47169 1442 aa25.33■■□□□ 1.65
RPP1BYDL130W RPA190P10964 1664 aaKnown RBP25.25■■□□□ 1.63
RPP1BYDL130W SPP41P38904 1435 aa25.19■■□□□ 1.62
RPP1BYDL130W TRM732Q03496 1420 aa25.19■■□□□ 1.62
RPP1BYDL130W YTA7P40340 1379 aa25.05■■□□□ 1.6
RPP1BYDL130W TSC11P40061 1430 aa25.01■■□□□ 1.59
RPP1BYDL130W LTE1P07866 1435 aa24.96■■□□□ 1.59
RPP1BYDL130W VTH1P40438 1549 aa24.96■■□□□ 1.59
RPP1BYDL130W VTH2P40890 1549 aa24.96■■□□□ 1.59
RPP1BYDL130W MYO4P32492 1471 aa24.94■■□□□ 1.58
RPP1BYDL130W NUP159P40477 1460 aa24.89■■□□□ 1.58
RPP1BYDL130W TY1B-JR2P47100 1755 aaKnown RBP24.89■■□□□ 1.57
RPP1BYDL130W TY1B-ER2Q03619 1755 aa24.89■■□□□ 1.57
RPP1BYDL130W TY1B-MR1Q04214 1755 aa24.89■■□□□ 1.57
RPP1BYDL130W TY1B-MR2Q04670 1755 aaKnown RBP24.89■■□□□ 1.57
RPP1BYDL130W TY1B-LR1Q12088 1755 aaKnown RBP24.89■■□□□ 1.57
RPP1BYDL130W TY1B-NL1Q12112 1755 aa24.89■■□□□ 1.57
RPP1BYDL130W TY1B-GR1Q12141 1755 aa24.89■■□□□ 1.57
RPP1BYDL130W TY1B-BLQ12490 1755 aa24.89■■□□□ 1.57
RPP1BYDL130W NTE1Q04958 1679 aa24.81■■□□□ 1.56
RPP1BYDL130W GEA2P39993 1459 aaKnown RBP24.74■■□□□ 1.55
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms