RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W SGS1P35187 1447 aa26.88■■□□□ 1.89
SHR5YOL110W MON2P48563 1636 aaPredicted RBP26.73■■□□□ 1.87
SHR5YOL110W INO80P53115 1489 aa26.65■■□□□ 1.86
SHR5YOL110W TCB3Q03640 1545 aaKnown RBP26.51■■□□□ 1.83
SHR5YOL110W TY1B-DR4Q07793 1604 aa26.23■■□□□ 1.79
SHR5YOL110W SWR1Q05471 1514 aa25.94■■□□□ 1.74
SHR5YOL110W HSL1P34244 1518 aa25.61■■□□□ 1.69
SHR5YOL110W SPT6P23615 1451 aaKnown RBP25.56■■□□□ 1.68
SHR5YOL110W DNA2P38859 1522 aa25.43■■□□□ 1.66
SHR5YOL110W SPA2P23201 1466 aaKnown RBP25.41■■□□□ 1.66
SHR5YOL110W SSN2P38931 1420 aa25.36■■□□□ 1.65
SHR5YOL110W KOG1P38873 1557 aa25.29■■□□□ 1.64
SHR5YOL110W HIR3P47171 1648 aa25.12■■□□□ 1.61
SHR5YOL110W XRN1P22147 1528 aaKnown RBP24.84■■□□□ 1.57
SHR5YOL110W DRS1P32892 752 aaKnown RBP24.57■■□□□ 1.52
SHR5YOL110W THO2P53552 1597 aaKnown RBP24.54■■□□□ 1.52
SHR5YOL110W BUD4P47136 1447 aa24.5■■□□□ 1.51
SHR5YOL110W REV3P14284 1504 aa24.47■■□□□ 1.51
SHR5YOL110W ECM5Q03214 1411 aa24.46■■□□□ 1.51
SHR5YOL110W SIN3P22579 1536 aa24.28■■□□□ 1.48
SHR5YOL110W TAF2P23255 1407 aa24.13■■□□□ 1.45
SHR5YOL110W MDS3P53094 1487 aa24.13■■□□□ 1.45
SHR5YOL110W SSK2P53599 1579 aa24.11■■□□□ 1.45
SHR5YOL110W ATG2P53855 1592 aa24.11■■□□□ 1.45
SHR5YOL110W PEP1P32319 1579 aa24.01■■□□□ 1.43
SHR5YOL110W ESP1Q03018 1630 aa23.92■■□□□ 1.42
SHR5YOL110W SKI3P17883 1432 aaKnown RBP23.9■■□□□ 1.42
SHR5YOL110W RSE1Q04693 1361 aaKnown RBP23.86■■□□□ 1.41
SHR5YOL110W MYO2P19524 1574 aaKnown RBP23.79■■□□□ 1.4
SHR5YOL110W YPK9Q12697 1472 aa23.59■■□□□ 1.37
SHR5YOL110W SCC2Q04002 1493 aa23.45■■□□□ 1.34
SHR5YOL110W BPT1P14772 1559 aa23.42■■□□□ 1.34
SHR5YOL110W UFD4P33202 1483 aa23.37■■□□□ 1.33
SHR5YOL110W RPO31P04051 1460 aa23.31■■□□□ 1.32
SHR5YOL110W POL1P13382 1468 aa23.25■■□□□ 1.31
SHR5YOL110W MTC1P47018 478 aaKnown RBP23.2■■□□□ 1.3
SHR5YOL110W RKR1Q04781 1562 aa23.14■■□□□ 1.29
SHR5YOL110W YCF1P39109 1515 aaKnown RBP23.13■■□□□ 1.29
SHR5YOL110W STU1P38198 1513 aa23.12■■□□□ 1.29
SHR5YOL110W TOP2P06786 1428 aaKnown RBP23.08■■□□□ 1.29
SHR5YOL110W TY2B-LR1P0C2J3 1770 aa23.06■■□□□ 1.28
SHR5YOL110W TY2B-FP0CX63 1770 aa23.06■■□□□ 1.28
SHR5YOL110W TY2B-GR2P0CX64 1770 aa23.06■■□□□ 1.28
SHR5YOL110W TY2B-CP25384 1770 aa23.06■■□□□ 1.28
SHR5YOL110W TY2B-DR2Q03494 1770 aa23.06■■□□□ 1.28
SHR5YOL110W TY1B-DR1Q03855 1755 aa23.06■■□□□ 1.28
SHR5YOL110W TY2B-DR3Q07791 1770 aaKnown RBP23.06■■□□□ 1.28
SHR5YOL110W TY2B-OR1Q12113 1770 aa23.06■■□□□ 1.28
SHR5YOL110W TY2B-DR1Q12472 1770 aa23.06■■□□□ 1.28
SHR5YOL110W TY2B-OR2Q12501 1770 aa23.06■■□□□ 1.28
SHR5YOL110W YOR1P53049 1477 aa22.98■■□□□ 1.27
SHR5YOL110W SMC4Q12267 1418 aa22.89■■□□□ 1.25
SHR5YOL110W TY1B-DR3Q99231 1755 aa22.86■■□□□ 1.25
SHR5YOL110W CDC25P04821 1589 aa22.85■■□□□ 1.25
SHR5YOL110W CHD1P32657 1468 aa22.84■■□□□ 1.25
SHR5YOL110W TY2B-BQ12491 1770 aa22.84■■□□□ 1.25
SHR5YOL110W RQC2Q12532 1038 aaKnown RBP22.82■■□□□ 1.24
SHR5YOL110W YTA7P40340 1379 aa22.81■■□□□ 1.24
SHR5YOL110W TY1B-BRQ12193 1756 aa22.81■■□□□ 1.24
SHR5YOL110W TY1B-GR3Q12316 1755 aa22.81■■□□□ 1.24
SHR5YOL110W TY1B-ORQ92393 1755 aa22.81■■□□□ 1.24
SHR5YOL110W TY1B-HO13535 1793 aa22.72■■□□□ 1.23
SHR5YOL110W TY1B-DR5P0C2I2 1755 aa22.72■■□□□ 1.23
SHR5YOL110W TY1B-DR6P0C2I3 1755 aa22.72■■□□□ 1.23
SHR5YOL110W TY1B-LR2P0C2I5 1755 aa22.72■■□□□ 1.23
SHR5YOL110W TY1B-LR3P0C2I6 1755 aaKnown RBP22.72■■□□□ 1.23
SHR5YOL110W TY1B-PR1P0C2I9 1755 aaKnown RBP22.72■■□□□ 1.23
SHR5YOL110W TY1B-PR2P0C2J0 1756 aa22.72■■□□□ 1.23
SHR5YOL110W TY1B-PR3P0C2J1 1755 aaKnown RBP22.72■■□□□ 1.23
SHR5YOL110W TY1B-JR1P47098 1755 aa22.72■■□□□ 1.23
SHR5YOL110W TY1B-ML2Q03434 1755 aaKnown RBP22.72■■□□□ 1.23
SHR5YOL110W TY1B-ER1Q03612 1755 aa22.72■■□□□ 1.23
SHR5YOL110W TY1B-ML1Q04711 1755 aaKnown RBP22.72■■□□□ 1.23
SHR5YOL110W TY1B-GR2Q12269 1755 aa22.72■■□□□ 1.23
SHR5YOL110W TY1B-OLQ12273 1755 aa22.72■■□□□ 1.23
SHR5YOL110W TY1B-PLQ12414 1755 aaKnown RBP22.72■■□□□ 1.23
SHR5YOL110W MMS22Q06164 1454 aa22.7■■□□□ 1.22
SHR5YOL110W PAN1P32521 1480 aa22.69■■□□□ 1.22
SHR5YOL110W MYO4P32492 1471 aa22.68■■□□□ 1.22
SHR5YOL110W ESC1Q03661 1658 aaKnown RBP22.65■■□□□ 1.22
SHR5YOL110W SPP41P38904 1435 aa22.6■■□□□ 1.21
SHR5YOL110W DNF1P32660 1571 aa22.53■■□□□ 1.2
SHR5YOL110W RPA190P10964 1664 aaKnown RBP22.45■■□□□ 1.18
SHR5YOL110W TSC11P40061 1430 aa22.43■■□□□ 1.18
SHR5YOL110W TRM732Q03496 1420 aa22.43■■□□□ 1.18
SHR5YOL110W VTH1P40438 1549 aa22.42■■□□□ 1.18
SHR5YOL110W VTH2P40890 1549 aa22.42■■□□□ 1.18
SHR5YOL110W TY1B-JR2P47100 1755 aaKnown RBP22.32■■□□□ 1.16
SHR5YOL110W TY1B-ER2Q03619 1755 aa22.32■■□□□ 1.16
SHR5YOL110W TY1B-MR1Q04214 1755 aa22.32■■□□□ 1.16
SHR5YOL110W TY1B-MR2Q04670 1755 aaKnown RBP22.32■■□□□ 1.16
SHR5YOL110W TY1B-LR1Q12088 1755 aaKnown RBP22.32■■□□□ 1.16
SHR5YOL110W TY1B-NL1Q12112 1755 aa22.32■■□□□ 1.16
SHR5YOL110W TY1B-GR1Q12141 1755 aa22.32■■□□□ 1.16
SHR5YOL110W TY1B-BLQ12490 1755 aa22.32■■□□□ 1.16
SHR5YOL110W SNQ2P32568 1501 aaKnown RBP22.31■■□□□ 1.16
SHR5YOL110W SAS10Q12136 610 aaPredicted RBP22.31■■□□□ 1.16
SHR5YOL110W MET5P47169 1442 aa22.28■■□□□ 1.16
SHR5YOL110W STH1P32597 1359 aa22.24■■□□□ 1.15
SHR5YOL110W NTE1Q04958 1679 aa22.23■■□□□ 1.15
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms