RNA–Protein interactions for RNA: YOR204W

DED1, Transcript of ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, yeastyeast

Gene DED1, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DED1YOR204W SGS1P35187 1447 aa21.8■■□□□ 1.08
DED1YOR204W MON2P48563 1636 aaPredicted RBP21.72■■□□□ 1.07
DED1YOR204W INO80P53115 1489 aa21.66■■□□□ 1.06
DED1YOR204W TCB3Q03640 1545 aaKnown RBP21.41■■□□□ 1.02
DED1YOR204W TY1B-DR4Q07793 1604 aa21.31■■□□□ 1
DED1YOR204W SWR1Q05471 1514 aa21.09■□□□□ 0.97
DED1YOR204W HSL1P34244 1518 aa20.79■□□□□ 0.92
DED1YOR204W DNA2P38859 1522 aa20.72■□□□□ 0.91
DED1YOR204W SPT6P23615 1451 aaKnown RBP20.71■□□□□ 0.91
DED1YOR204W SSN2P38931 1420 aa20.55■□□□□ 0.88
DED1YOR204W SPA2P23201 1466 aaKnown RBP20.53■□□□□ 0.88
DED1YOR204W KOG1P38873 1557 aa20.47■□□□□ 0.87
DED1YOR204W HIR3P47171 1648 aa20.39■□□□□ 0.85
DED1YOR204W XRN1P22147 1528 aaKnown RBP20.16■□□□□ 0.82
DED1YOR204W ECM5Q03214 1411 aa19.89■□□□□ 0.77
DED1YOR204W DRS1P32892 752 aaKnown RBP19.84■□□□□ 0.77
DED1YOR204W REV3P14284 1504 aa19.84■□□□□ 0.77
DED1YOR204W BUD4P47136 1447 aa19.83■□□□□ 0.76
DED1YOR204W THO2P53552 1597 aaKnown RBP19.82■□□□□ 0.76
DED1YOR204W TAF2P23255 1407 aa19.64■□□□□ 0.73
DED1YOR204W SIN3P22579 1536 aa19.61■□□□□ 0.73
DED1YOR204W ATG2P53855 1592 aa19.57■□□□□ 0.72
DED1YOR204W MDS3P53094 1487 aa19.57■□□□□ 0.72
DED1YOR204W SSK2P53599 1579 aa19.52■□□□□ 0.71
DED1YOR204W PEP1P32319 1579 aa19.51■□□□□ 0.71
DED1YOR204W ESP1Q03018 1630 aa19.39■□□□□ 0.69
DED1YOR204W SKI3P17883 1432 aaKnown RBP19.38■□□□□ 0.69
DED1YOR204W RSE1Q04693 1361 aaKnown RBP19.38■□□□□ 0.69
DED1YOR204W MYO2P19524 1574 aaKnown RBP19.17■□□□□ 0.66
DED1YOR204W YPK9Q12697 1472 aa19.08■□□□□ 0.64
DED1YOR204W SCC2Q04002 1493 aa19■□□□□ 0.63
DED1YOR204W BPT1P14772 1559 aa18.96■□□□□ 0.63
DED1YOR204W UFD4P33202 1483 aa18.96■□□□□ 0.63
DED1YOR204W RPO31P04051 1460 aa18.88■□□□□ 0.61
DED1YOR204W MTC1P47018 478 aaKnown RBP18.84■□□□□ 0.61
DED1YOR204W POL1P13382 1468 aa18.8■□□□□ 0.6
DED1YOR204W TY2B-LR1P0C2J3 1770 aa18.77■□□□□ 0.6
DED1YOR204W TY2B-FP0CX63 1770 aa18.77■□□□□ 0.6
DED1YOR204W TY2B-GR2P0CX64 1770 aa18.77■□□□□ 0.6
DED1YOR204W TY2B-CP25384 1770 aa18.77■□□□□ 0.6
DED1YOR204W TY2B-DR2Q03494 1770 aa18.77■□□□□ 0.6
DED1YOR204W TY1B-DR1Q03855 1755 aa18.77■□□□□ 0.6
DED1YOR204W TY2B-DR3Q07791 1770 aaKnown RBP18.77■□□□□ 0.6
DED1YOR204W TY2B-OR1Q12113 1770 aa18.77■□□□□ 0.6
DED1YOR204W TY2B-DR1Q12472 1770 aa18.77■□□□□ 0.6
DED1YOR204W TY2B-OR2Q12501 1770 aa18.77■□□□□ 0.6
DED1YOR204W YCF1P39109 1515 aaKnown RBP18.75■□□□□ 0.59
DED1YOR204W STU1P38198 1513 aa18.73■□□□□ 0.59
DED1YOR204W RKR1Q04781 1562 aa18.73■□□□□ 0.59
DED1YOR204W TOP2P06786 1428 aaKnown RBP18.67■□□□□ 0.58
DED1YOR204W TY1B-DR3Q99231 1755 aa18.61■□□□□ 0.57
DED1YOR204W TY2B-BQ12491 1770 aa18.58■□□□□ 0.56
DED1YOR204W YOR1P53049 1477 aa18.58■□□□□ 0.56
DED1YOR204W TY1B-BRQ12193 1756 aa18.56■□□□□ 0.56
DED1YOR204W TY1B-GR3Q12316 1755 aa18.56■□□□□ 0.56
DED1YOR204W TY1B-ORQ92393 1755 aa18.56■□□□□ 0.56
DED1YOR204W CDC25P04821 1589 aa18.52■□□□□ 0.55
DED1YOR204W CHD1P32657 1468 aa18.51■□□□□ 0.55
DED1YOR204W RQC2Q12532 1038 aaKnown RBP18.51■□□□□ 0.55
DED1YOR204W TY1B-HO13535 1793 aa18.48■□□□□ 0.55
DED1YOR204W TY1B-DR5P0C2I2 1755 aa18.48■□□□□ 0.55
DED1YOR204W TY1B-DR6P0C2I3 1755 aa18.48■□□□□ 0.55
DED1YOR204W TY1B-LR2P0C2I5 1755 aa18.48■□□□□ 0.55
DED1YOR204W TY1B-LR3P0C2I6 1755 aaKnown RBP18.48■□□□□ 0.55
DED1YOR204W TY1B-PR1P0C2I9 1755 aaKnown RBP18.48■□□□□ 0.55
DED1YOR204W TY1B-PR2P0C2J0 1756 aa18.48■□□□□ 0.55
DED1YOR204W TY1B-PR3P0C2J1 1755 aaKnown RBP18.48■□□□□ 0.55
DED1YOR204W TY1B-JR1P47098 1755 aa18.48■□□□□ 0.55
DED1YOR204W TY1B-ML2Q03434 1755 aaKnown RBP18.48■□□□□ 0.55
DED1YOR204W TY1B-ER1Q03612 1755 aa18.48■□□□□ 0.55
DED1YOR204W TY1B-ML1Q04711 1755 aaKnown RBP18.48■□□□□ 0.55
DED1YOR204W TY1B-GR2Q12269 1755 aa18.48■□□□□ 0.55
DED1YOR204W TY1B-OLQ12273 1755 aa18.48■□□□□ 0.55
DED1YOR204W TY1B-PLQ12414 1755 aaKnown RBP18.48■□□□□ 0.55
DED1YOR204W SMC4Q12267 1418 aa18.47■□□□□ 0.55
DED1YOR204W PAN1P32521 1480 aa18.36■□□□□ 0.53
DED1YOR204W MMS22Q06164 1454 aa18.36■□□□□ 0.53
DED1YOR204W DNF1P32660 1571 aa18.36■□□□□ 0.53
DED1YOR204W ESC1Q03661 1658 aaKnown RBP18.36■□□□□ 0.53
DED1YOR204W YTA7P40340 1379 aa18.35■□□□□ 0.53
DED1YOR204W SPP41P38904 1435 aa18.28■□□□□ 0.52
DED1YOR204W MYO4P32492 1471 aa18.26■□□□□ 0.51
DED1YOR204W RPA190P10964 1664 aaKnown RBP18.23■□□□□ 0.51
DED1YOR204W TY1B-JR2P47100 1755 aaKnown RBP18.15■□□□□ 0.5
DED1YOR204W TY1B-ER2Q03619 1755 aa18.15■□□□□ 0.5
DED1YOR204W TY1B-MR1Q04214 1755 aa18.15■□□□□ 0.5
DED1YOR204W TY1B-MR2Q04670 1755 aaKnown RBP18.15■□□□□ 0.5
DED1YOR204W TY1B-LR1Q12088 1755 aaKnown RBP18.15■□□□□ 0.5
DED1YOR204W TY1B-NL1Q12112 1755 aa18.15■□□□□ 0.5
DED1YOR204W TY1B-GR1Q12141 1755 aa18.15■□□□□ 0.5
DED1YOR204W TY1B-BLQ12490 1755 aa18.15■□□□□ 0.5
DED1YOR204W VTH1P40438 1549 aa18.14■□□□□ 0.49
DED1YOR204W VTH2P40890 1549 aa18.14■□□□□ 0.49
DED1YOR204W TSC11P40061 1430 aa18.14■□□□□ 0.49
DED1YOR204W TRM732Q03496 1420 aa18.1■□□□□ 0.49
DED1YOR204W SAS10Q12136 610 aaPredicted RBP18.09■□□□□ 0.49
DED1YOR204W SNQ2P32568 1501 aaKnown RBP18.05■□□□□ 0.48
DED1YOR204W NTE1Q04958 1679 aa17.99■□□□□ 0.47
DED1YOR204W MET5P47169 1442 aa17.99■□□□□ 0.47
DED1YOR204W STH1P32597 1359 aa17.98■□□□□ 0.47
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms