RNA–Protein interactions for RNA: YDR488C

PAC11, Transcript of Dynein intermediate chain, microtubule motor protein, yeastyeast

Gene PAC11, Length 1,602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAC11YDR488C BFR2Q06631 534 aaKnown RBP18.3■□□□□ 0.52
PAC11YDR488C RQC2Q12532 1038 aaKnown RBP17.8■□□□□ 0.44
PAC11YDR488C NOP2P40991 618 aaKnown RBP17.44■□□□□ 0.38
PAC11YDR488C SPA2P23201 1466 aaKnown RBP16.95■□□□□ 0.3
PAC11YDR488C SKI3P17883 1432 aaKnown RBP16.83■□□□□ 0.28
PAC11YDR488C NSR1P27476 414 aaKnown RBP RIP-Chip data16.81■□□□□ 0.28not detected
PAC11YDR488C CAB3P36076 571 aa16.78■□□□□ 0.28
PAC11YDR488C EBP2P36049 427 aaKnown RBP16.77■□□□□ 0.27
PAC11YDR488C SSN2P38931 1420 aa16.49■□□□□ 0.23
PAC11YDR488C SGS1P35187 1447 aa16.39■□□□□ 0.21
PAC11YDR488C URN1Q06525 465 aaKnown RBP16.31■□□□□ 0.2
PAC11YDR488C SIS2P36024 562 aa16.25■□□□□ 0.19
PAC11YDR488C YPR148CQ06523 435 aa16.1■□□□□ 0.17
PAC11YDR488C DRS1P32892 752 aaKnown RBP16.05■□□□□ 0.16
PAC11YDR488C ENP1P38333 483 aaKnown RBP15.9■□□□□ 0.14
PAC11YDR488C TCB3Q03640 1545 aaKnown RBP15.9■□□□□ 0.14
PAC11YDR488C TAF7Q05021 590 aa15.75■□□□□ 0.11
PAC11YDR488C CHD1P32657 1468 aa15.69■□□□□ 0.1
PAC11YDR488C INO80P53115 1489 aa15.65■□□□□ 0.1
PAC11YDR488C TCB2P48231 1178 aa15.64■□□□□ 0.09
PAC11YDR488C MMS22Q06164 1454 aa15.63■□□□□ 0.09
PAC11YDR488C MON2P48563 1636 aaPredicted RBP15.61■□□□□ 0.09
PAC11YDR488C STH1P32597 1359 aa15.56■□□□□ 0.08
PAC11YDR488C TFA1P36100 482 aa15.54■□□□□ 0.08
PAC11YDR488C UFD4P33202 1483 aa15.52■□□□□ 0.08
PAC11YDR488C MNN4P36044 1178 aa15.5■□□□□ 0.07
PAC11YDR488C AVT3P36062 692 aa15.5■□□□□ 0.07
PAC11YDR488C YFR016CP43597 1233 aaKnown RBP15.5■□□□□ 0.07
PAC11YDR488C SPP41P38904 1435 aa15.4■□□□□ 0.06
PAC11YDR488C RPS0BP46654 252 aaKnown RBP15.4■□□□□ 0.06
PAC11YDR488C CLC1P17891 233 aa15.37■□□□□ 0.05
PAC11YDR488C POL5P39985 1022 aaKnown RBP15.34■□□□□ 0.05
PAC11YDR488C SEC3P33332 1336 aaKnown RBP15.33■□□□□ 0.05
PAC11YDR488C XRN1P22147 1528 aaKnown RBP15.3■□□□□ 0.04
PAC11YDR488C PRS1P32895 427 aaKnown RBP15.28■□□□□ 0.04
PAC11YDR488C SPT7P35177 1332 aa15.27■□□□□ 0.04
PAC11YDR488C IME2P32581 645 aa15.26■□□□□ 0.03
PAC11YDR488C ECM5Q03214 1411 aa15.25■□□□□ 0.03
PAC11YDR488C TY1B-DR4Q07793 1604 aa15.24■□□□□ 0.03
PAC11YDR488C QCR6P00127 147 aa15.24■□□□□ 0.03
PAC11YDR488C LEO1P38439 464 aa15.22■□□□□ 0.03
PAC11YDR488C RSE1Q04693 1361 aaKnown RBP15.22■□□□□ 0.03
PAC11YDR488C IKI3Q06706 1349 aaKnown RBP15.16■□□□□ 0.02
PAC11YDR488C SWR1Q05471 1514 aa15.15■□□□□ 0.02
PAC11YDR488C TRM732Q03496 1420 aa15.15■□□□□ 0.02
PAC11YDR488C AIM44Q99299 758 aa15.14■□□□□ 0.01
PAC11YDR488C RLF2Q12495 606 aa15.12■□□□□ 0.01
PAC11YDR488C CWC22P53333 577 aaKnown RBP15.09■□□□□ 0.01
PAC11YDR488C EAF7P53911 425 aaKnown RBP15.05■□□□□ -0
PAC11YDR488C FPR3P38911 411 aaKnown RBP15.03■□□□□ -0
PAC11YDR488C NOP53Q12080 455 aaKnown RBP15.03■□□□□ -0
PAC11YDR488C OPY1P38271 328 aa15.02□□□□□ -0.01
PAC11YDR488C YGR130CP53278 816 aa14.99□□□□□ -0.01
PAC11YDR488C DNA2P38859 1522 aa14.93□□□□□ -0.02
PAC11YDR488C NUG1P40010 520 aaKnown RBP14.92□□□□□ -0.02
PAC11YDR488C PEP1P32319 1579 aa14.91□□□□□ -0.02
PAC11YDR488C DIP2Q12220 943 aaPredicted RBP14.9□□□□□ -0.02
PAC11YDR488C CFT1Q06632 1357 aaKnown RBP14.89□□□□□ -0.03
PAC11YDR488C HSL1P34244 1518 aa14.88□□□□□ -0.03
PAC11YDR488C SNF7P39929 240 aaKnown RBP14.88□□□□□ -0.03
PAC11YDR488C BUD4P47136 1447 aa14.87□□□□□ -0.03
PAC11YDR488C SRB8P25648 1427 aa14.86□□□□□ -0.03
PAC11YDR488C SPT6P23615 1451 aaKnown RBP14.86□□□□□ -0.03
PAC11YDR488C RPC31P17890 251 aa14.85□□□□□ -0.03
PAC11YDR488C KRI1P42846 591 aaKnown RBP14.85□□□□□ -0.03
PAC11YDR488C YRB30P53107 440 aaPredicted RBP14.85□□□□□ -0.03
PAC11YDR488C DEF1P35732 738 aaKnown RBP14.83□□□□□ -0.04
PAC11YDR488C ENV11P53246 860 aa14.83□□□□□ -0.04
PAC11YDR488C RIX1P38883 763 aaPredicted RBP14.82□□□□□ -0.04
PAC11YDR488C SSM4P40318 1319 aa14.82□□□□□ -0.04
PAC11YDR488C TOP2P06786 1428 aaKnown RBP14.81□□□□□ -0.04
PAC11YDR488C NUP170P38181 1502 aa14.81□□□□□ -0.04
PAC11YDR488C YLR419WQ06698 1435 aaKnown RBP14.76□□□□□ -0.05
PAC11YDR488C PAF1P38351 445 aa14.76□□□□□ -0.05
PAC11YDR488C RNA1P11745 407 aaKnown RBP14.75□□□□□ -0.05
PAC11YDR488C SPT21P35209 758 aa14.75□□□□□ -0.05
PAC11YDR488C MYO2P19524 1574 aaKnown RBP14.75□□□□□ -0.05
PAC11YDR488C KOG1P38873 1557 aa14.74□□□□□ -0.05
PAC11YDR488C PDR10P51533 1564 aa14.74□□□□□ -0.05
PAC11YDR488C MTC1P47018 478 aaKnown RBP14.74□□□□□ -0.05
PAC11YDR488C SAS10Q12136 610 aaPredicted RBP14.74□□□□□ -0.05
PAC11YDR488C RTT106P40161 455 aa14.72□□□□□ -0.05
PAC11YDR488C FPR4Q06205 392 aaPredicted RBP14.72□□□□□ -0.05
PAC11YDR488C STU1P38198 1513 aa14.68□□□□□ -0.06
PAC11YDR488C ROX1P25042 368 aa14.67□□□□□ -0.06
PAC11YDR488C YTA7P40340 1379 aa14.67□□□□□ -0.06
PAC11YDR488C LEU3P08638 886 aa14.63□□□□□ -0.07
PAC11YDR488C MMS1Q06211 1407 aa14.62□□□□□ -0.07
PAC11YDR488C NOP58Q12499 511 aaKnown RBP14.61□□□□□ -0.07
PAC11YDR488C HIR3P47171 1648 aa14.6□□□□□ -0.07
PAC11YDR488C THO2P53552 1597 aaKnown RBP14.6□□□□□ -0.07
PAC11YDR488C YIR014WP40570 242 aa14.6□□□□□ -0.07
PAC11YDR488C SPC110P32380 944 aa14.58□□□□□ -0.08
PAC11YDR488C SMC4Q12267 1418 aa14.57□□□□□ -0.08
PAC11YDR488C FUN12P39730 1002 aaKnown RBP14.56□□□□□ -0.08
PAC11YDR488C NAP1P25293 417 aaKnown RBP14.55□□□□□ -0.08
PAC11YDR488C SLN1P39928 1220 aaPredicted RBP14.54□□□□□ -0.08
PAC11YDR488C SPT2P06843 333 aaPredicted RBP14.53□□□□□ -0.08
PAC11YDR488C PSD2P53037 1138 aaKnown RBP14.53□□□□□ -0.08
PAC11YDR488C CTR9P89105 1077 aa14.52□□□□□ -0.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms