RNA–Protein interactions for RNA: YKL148C

SDH1, Transcript of Flavoprotein subunit of succinate dehydrogenase, yeastyeast

Gene SDH1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH1YKL148C SGS1P35187 1447 aa20.71■□□□□ 0.91
SDH1YKL148C INO80P53115 1489 aa20.17■□□□□ 0.82
SDH1YKL148C SPA2P23201 1466 aaKnown RBP20.16■□□□□ 0.82
SDH1YKL148C SSN2P38931 1420 aa19.99■□□□□ 0.79
SDH1YKL148C TCB3Q03640 1545 aaKnown RBP19.73■□□□□ 0.75
SDH1YKL148C TY1B-DR4Q07793 1604 aa19.46■□□□□ 0.71
SDH1YKL148C DRS1P32892 752 aaKnown RBP19.4■□□□□ 0.7
SDH1YKL148C HSL1P34244 1518 aa19.2■□□□□ 0.66
SDH1YKL148C SPT6P23615 1451 aaKnown RBP19.12■□□□□ 0.65
SDH1YKL148C MON2P48563 1636 aaPredicted RBP18.96■□□□□ 0.63
SDH1YKL148C HIR3P47171 1648 aa18.89■□□□□ 0.61
SDH1YKL148C XRN1P22147 1528 aaKnown RBP18.83■□□□□ 0.6
SDH1YKL148C SWR1Q05471 1514 aa18.81■□□□□ 0.6
SDH1YKL148C REV3P14284 1504 aa18.61■□□□□ 0.57
SDH1YKL148C THO2P53552 1597 aaKnown RBP18.53■□□□□ 0.56
SDH1YKL148C SIN3P22579 1536 aa18.5■□□□□ 0.55
SDH1YKL148C SSK2P53599 1579 aa18.42■□□□□ 0.54
SDH1YKL148C TAF2P23255 1407 aa18.35■□□□□ 0.53
SDH1YKL148C SKI3P17883 1432 aaKnown RBP18.35■□□□□ 0.53
SDH1YKL148C ESP1Q03018 1630 aa18.25■□□□□ 0.51
SDH1YKL148C MYO2P19524 1574 aaKnown RBP18.22■□□□□ 0.51
SDH1YKL148C CHD1P32657 1468 aa18.21■□□□□ 0.51
SDH1YKL148C MMS22Q06164 1454 aa18.17■□□□□ 0.5
SDH1YKL148C KOG1P38873 1557 aa18.06■□□□□ 0.48
SDH1YKL148C DNA2P38859 1522 aa18.06■□□□□ 0.48
SDH1YKL148C BUD4P47136 1447 aa18.05■□□□□ 0.48
SDH1YKL148C POL1P13382 1468 aa18.02■□□□□ 0.47
SDH1YKL148C ATG2P53855 1592 aa18■□□□□ 0.47
SDH1YKL148C STU1P38198 1513 aa17.97■□□□□ 0.47
SDH1YKL148C YPK9Q12697 1472 aa17.94■□□□□ 0.46
SDH1YKL148C ECM5Q03214 1411 aa17.91■□□□□ 0.46
SDH1YKL148C YTA7P40340 1379 aa17.88■□□□□ 0.45
SDH1YKL148C BPT1P14772 1559 aa17.8■□□□□ 0.44
SDH1YKL148C RKR1Q04781 1562 aa17.76■□□□□ 0.43
SDH1YKL148C PEP1P32319 1579 aa17.74■□□□□ 0.43
SDH1YKL148C SCC2Q04002 1493 aa17.73■□□□□ 0.43
SDH1YKL148C SAS10Q12136 610 aaPredicted RBP17.72■□□□□ 0.43
SDH1YKL148C YOR1P53049 1477 aa17.71■□□□□ 0.43
SDH1YKL148C MDS3P53094 1487 aa17.69■□□□□ 0.42
SDH1YKL148C MYO4P32492 1471 aa17.65■□□□□ 0.42
SDH1YKL148C RPO31P04051 1460 aa17.64■□□□□ 0.41
SDH1YKL148C TOP2P06786 1428 aaKnown RBP17.57■□□□□ 0.4
SDH1YKL148C UFD4P33202 1483 aa17.55■□□□□ 0.4
SDH1YKL148C SMC4Q12267 1418 aa17.55■□□□□ 0.4
SDH1YKL148C TRM732Q03496 1420 aa17.53■□□□□ 0.4
SDH1YKL148C RSE1Q04693 1361 aaKnown RBP17.52■□□□□ 0.4
SDH1YKL148C YCF1P39109 1515 aaKnown RBP17.5■□□□□ 0.39
SDH1YKL148C TY2B-LR1P0C2J3 1770 aa17.45■□□□□ 0.38
SDH1YKL148C TY2B-FP0CX63 1770 aa17.45■□□□□ 0.38
SDH1YKL148C TY2B-GR2P0CX64 1770 aa17.45■□□□□ 0.38
SDH1YKL148C TY2B-CP25384 1770 aa17.45■□□□□ 0.38
SDH1YKL148C TY2B-DR2Q03494 1770 aa17.45■□□□□ 0.38
SDH1YKL148C TY1B-DR1Q03855 1755 aa17.45■□□□□ 0.38
SDH1YKL148C TY2B-DR3Q07791 1770 aaKnown RBP17.45■□□□□ 0.38
SDH1YKL148C TY2B-OR1Q12113 1770 aa17.45■□□□□ 0.38
SDH1YKL148C TY2B-DR1Q12472 1770 aa17.45■□□□□ 0.38
SDH1YKL148C TY2B-OR2Q12501 1770 aa17.45■□□□□ 0.38
SDH1YKL148C SNQ2P32568 1501 aaKnown RBP17.43■□□□□ 0.38
SDH1YKL148C TAF7Q05021 590 aa17.42■□□□□ 0.38
SDH1YKL148C IKI3Q06706 1349 aaKnown RBP17.42■□□□□ 0.38
SDH1YKL148C TY1B-DR3Q99231 1755 aa17.42■□□□□ 0.38
SDH1YKL148C STH1P32597 1359 aa17.39■□□□□ 0.37
SDH1YKL148C MLP2P40457 1679 aa17.32■□□□□ 0.36
SDH1YKL148C TY2B-BQ12491 1770 aa17.32■□□□□ 0.36
SDH1YKL148C PDR15Q04182 1529 aaKnown RBP17.24■□□□□ 0.35
SDH1YKL148C NUP170P38181 1502 aa17.23■□□□□ 0.35
SDH1YKL148C SPP41P38904 1435 aa17.17■□□□□ 0.34
SDH1YKL148C GEA1P47102 1408 aaPredicted RBP17.17■□□□□ 0.34
SDH1YKL148C IFH1P39520 1085 aa17.17■□□□□ 0.34
SDH1YKL148C TY1B-HO13535 1793 aa17.17■□□□□ 0.34
SDH1YKL148C TY1B-DR5P0C2I2 1755 aa17.17■□□□□ 0.34
SDH1YKL148C TY1B-DR6P0C2I3 1755 aa17.17■□□□□ 0.34
SDH1YKL148C TY1B-LR2P0C2I5 1755 aa17.17■□□□□ 0.34
SDH1YKL148C TY1B-LR3P0C2I6 1755 aaKnown RBP17.17■□□□□ 0.34
SDH1YKL148C TY1B-PR1P0C2I9 1755 aaKnown RBP17.17■□□□□ 0.34
SDH1YKL148C TY1B-PR2P0C2J0 1756 aa17.17■□□□□ 0.34
SDH1YKL148C TY1B-PR3P0C2J1 1755 aaKnown RBP17.17■□□□□ 0.34
SDH1YKL148C TY1B-JR1P47098 1755 aa17.17■□□□□ 0.34
SDH1YKL148C TY1B-ML2Q03434 1755 aaKnown RBP17.17■□□□□ 0.34
SDH1YKL148C TY1B-ER1Q03612 1755 aa17.17■□□□□ 0.34
SDH1YKL148C TY1B-ML1Q04711 1755 aaKnown RBP17.17■□□□□ 0.34
SDH1YKL148C TY1B-GR2Q12269 1755 aa17.17■□□□□ 0.34
SDH1YKL148C TY1B-OLQ12273 1755 aa17.17■□□□□ 0.34
SDH1YKL148C TY1B-PLQ12414 1755 aaKnown RBP17.17■□□□□ 0.34
SDH1YKL148C SSM4P40318 1319 aa17.16■□□□□ 0.34
SDH1YKL148C ULS1Q08562 1619 aa17.14■□□□□ 0.34
SDH1YKL148C TY1B-BRQ12193 1756 aa17.12■□□□□ 0.33
SDH1YKL148C TY1B-GR3Q12316 1755 aa17.12■□□□□ 0.33
SDH1YKL148C TY1B-ORQ92393 1755 aa17.12■□□□□ 0.33
SDH1YKL148C RQC2Q12532 1038 aaKnown RBP17.06■□□□□ 0.32
SDH1YKL148C VTH1P40438 1549 aa17.04■□□□□ 0.32
SDH1YKL148C VTH2P40890 1549 aa17.04■□□□□ 0.32
SDH1YKL148C TSC11P40061 1430 aa17.03■□□□□ 0.32
SDH1YKL148C PAN1P32521 1480 aa17■□□□□ 0.31
SDH1YKL148C CDC25P04821 1589 aa16.99■□□□□ 0.31
SDH1YKL148C TY3B-GQ99315 1547 aa16.95■□□□□ 0.3
SDH1YKL148C SNT2P53127 1403 aa16.93■□□□□ 0.3
SDH1YKL148C TY1B-JR2P47100 1755 aaKnown RBP16.91■□□□□ 0.3
SDH1YKL148C TY1B-ER2Q03619 1755 aa16.91■□□□□ 0.3
SDH1YKL148C TY1B-MR1Q04214 1755 aa16.91■□□□□ 0.3
Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms