RNA–Protein interactions for RNA: YBL075C

SSA3, Transcript of ATPase involved in protein folding and the response to stress, yeastyeast

Gene SSA3, Length 1,950 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA3YBL075C MON2P48563 1636 aaPredicted RBP24.01■■□□□ 1.43
SSA3YBL075C SGS1P35187 1447 aa24.01■■□□□ 1.43
SSA3YBL075C INO80P53115 1489 aa23.95■■□□□ 1.42
SSA3YBL075C TCB3Q03640 1545 aaKnown RBP23.58■■□□□ 1.37
SSA3YBL075C TY1B-DR4Q07793 1604 aa23.54■■□□□ 1.36
SSA3YBL075C SWR1Q05471 1514 aa23.33■■□□□ 1.32
SSA3YBL075C HSL1P34244 1518 aa22.99■■□□□ 1.27
SSA3YBL075C DNA2P38859 1522 aa22.93■■□□□ 1.26
SSA3YBL075C SPT6P23615 1451 aaKnown RBP22.9■■□□□ 1.26
SSA3YBL075C SPA2P23201 1466 aaKnown RBP22.72■■□□□ 1.23
SSA3YBL075C SSN2P38931 1420 aa22.65■■□□□ 1.22
SSA3YBL075C KOG1P38873 1557 aa22.61■■□□□ 1.21
SSA3YBL075C HIR3P47171 1648 aa22.55■■□□□ 1.2
SSA3YBL075C XRN1P22147 1528 aaKnown RBP22.3■■□□□ 1.16
SSA3YBL075C ECM5Q03214 1411 aa21.97■■□□□ 1.11
SSA3YBL075C REV3P14284 1504 aa21.94■■□□□ 1.1
SSA3YBL075C BUD4P47136 1447 aa21.89■■□□□ 1.09
SSA3YBL075C THO2P53552 1597 aaKnown RBP21.88■■□□□ 1.09
SSA3YBL075C DRS1P32892 752 aaKnown RBP21.85■■□□□ 1.09
SSA3YBL075C TAF2P23255 1407 aa21.82■■□□□ 1.08
SSA3YBL075C ATG2P53855 1592 aa21.66■■□□□ 1.06
SSA3YBL075C MDS3P53094 1487 aa21.65■■□□□ 1.06
SSA3YBL075C SIN3P22579 1536 aa21.62■■□□□ 1.05
SSA3YBL075C SSK2P53599 1579 aa21.57■■□□□ 1.04
SSA3YBL075C PEP1P32319 1579 aa21.54■■□□□ 1.04
SSA3YBL075C SKI3P17883 1432 aaKnown RBP21.47■■□□□ 1.03
SSA3YBL075C RSE1Q04693 1361 aaKnown RBP21.47■■□□□ 1.03
SSA3YBL075C ESP1Q03018 1630 aa21.45■■□□□ 1.02
SSA3YBL075C BFR2Q06631 534 aaKnown RBP21.31■■□□□ 1
SSA3YBL075C MYO2P19524 1574 aaKnown RBP21.18■□□□□ 0.98
SSA3YBL075C YPK9Q12697 1472 aa21.02■□□□□ 0.95
SSA3YBL075C SCC2Q04002 1493 aa20.99■□□□□ 0.95
SSA3YBL075C BPT1P14772 1559 aa20.99■□□□□ 0.95
SSA3YBL075C MTC1P47018 478 aaKnown RBP20.97■□□□□ 0.95
SSA3YBL075C NOP2P40991 618 aaKnown RBP20.96■□□□□ 0.95
SSA3YBL075C UFD4P33202 1483 aa20.95■□□□□ 0.94
SSA3YBL075C TY2B-LR1P0C2J3 1770 aa20.82■□□□□ 0.92
SSA3YBL075C TY2B-FP0CX63 1770 aa20.82■□□□□ 0.92
SSA3YBL075C TY2B-GR2P0CX64 1770 aa20.82■□□□□ 0.92
SSA3YBL075C TY2B-CP25384 1770 aa20.82■□□□□ 0.92
SSA3YBL075C TY2B-DR2Q03494 1770 aa20.82■□□□□ 0.92
SSA3YBL075C TY1B-DR1Q03855 1755 aa20.82■□□□□ 0.92
SSA3YBL075C TY2B-DR3Q07791 1770 aaKnown RBP20.82■□□□□ 0.92
SSA3YBL075C TY2B-OR1Q12113 1770 aa20.82■□□□□ 0.92
SSA3YBL075C TY2B-DR1Q12472 1770 aa20.82■□□□□ 0.92
SSA3YBL075C TY2B-OR2Q12501 1770 aa20.82■□□□□ 0.92
SSA3YBL075C RPO31P04051 1460 aa20.78■□□□□ 0.92
SSA3YBL075C RKR1Q04781 1562 aa20.73■□□□□ 0.91
SSA3YBL075C STU1P38198 1513 aa20.71■□□□□ 0.91
SSA3YBL075C POL1P13382 1468 aa20.7■□□□□ 0.9
SSA3YBL075C YCF1P39109 1515 aaKnown RBP20.69■□□□□ 0.9
SSA3YBL075C TY1B-DR3Q99231 1755 aa20.63■□□□□ 0.89
SSA3YBL075C TY2B-BQ12491 1770 aa20.6■□□□□ 0.89
SSA3YBL075C RQC2Q12532 1038 aaKnown RBP20.58■□□□□ 0.89
SSA3YBL075C TY1B-BRQ12193 1756 aa20.57■□□□□ 0.88
SSA3YBL075C TY1B-GR3Q12316 1755 aa20.57■□□□□ 0.88
SSA3YBL075C TY1B-ORQ92393 1755 aa20.57■□□□□ 0.88
SSA3YBL075C TOP2P06786 1428 aaKnown RBP20.55■□□□□ 0.88
SSA3YBL075C CDC25P04821 1589 aa20.49■□□□□ 0.87
SSA3YBL075C YOR1P53049 1477 aa20.49■□□□□ 0.87
SSA3YBL075C TY1B-HO13535 1793 aa20.47■□□□□ 0.87
SSA3YBL075C TY1B-DR5P0C2I2 1755 aa20.47■□□□□ 0.87
SSA3YBL075C TY1B-DR6P0C2I3 1755 aa20.47■□□□□ 0.87
SSA3YBL075C TY1B-LR2P0C2I5 1755 aa20.47■□□□□ 0.87
SSA3YBL075C TY1B-LR3P0C2I6 1755 aaKnown RBP20.47■□□□□ 0.87
SSA3YBL075C TY1B-PR1P0C2I9 1755 aaKnown RBP20.47■□□□□ 0.87
SSA3YBL075C TY1B-PR2P0C2J0 1756 aa20.47■□□□□ 0.87
SSA3YBL075C TY1B-PR3P0C2J1 1755 aaKnown RBP20.47■□□□□ 0.87
SSA3YBL075C TY1B-JR1P47098 1755 aa20.47■□□□□ 0.87
SSA3YBL075C TY1B-ML2Q03434 1755 aaKnown RBP20.47■□□□□ 0.87
SSA3YBL075C TY1B-ER1Q03612 1755 aa20.47■□□□□ 0.87
SSA3YBL075C TY1B-ML1Q04711 1755 aaKnown RBP20.47■□□□□ 0.87
SSA3YBL075C TY1B-GR2Q12269 1755 aa20.47■□□□□ 0.87
SSA3YBL075C TY1B-OLQ12273 1755 aa20.47■□□□□ 0.87
SSA3YBL075C TY1B-PLQ12414 1755 aaKnown RBP20.47■□□□□ 0.87
SSA3YBL075C NSR1P27476 414 aaKnown RBP RIP-Chip data20.46■□□□□ 0.87not detected
SSA3YBL075C ESC1Q03661 1658 aaKnown RBP20.42■□□□□ 0.86
SSA3YBL075C CHD1P32657 1468 aa20.41■□□□□ 0.86
SSA3YBL075C SMC4Q12267 1418 aa20.33■□□□□ 0.84
SSA3YBL075C DNF1P32660 1571 aa20.31■□□□□ 0.84
SSA3YBL075C MMS22Q06164 1454 aa20.27■□□□□ 0.84
SSA3YBL075C PAN1P32521 1480 aa20.26■□□□□ 0.83
SSA3YBL075C RPA190P10964 1664 aaKnown RBP20.19■□□□□ 0.82
SSA3YBL075C SPP41P38904 1435 aa20.17■□□□□ 0.82
SSA3YBL075C YTA7P40340 1379 aa20.15■□□□□ 0.82
SSA3YBL075C TY1B-JR2P47100 1755 aaKnown RBP20.11■□□□□ 0.81
SSA3YBL075C TY1B-ER2Q03619 1755 aa20.11■□□□□ 0.81
SSA3YBL075C TY1B-MR1Q04214 1755 aa20.11■□□□□ 0.81
SSA3YBL075C TY1B-MR2Q04670 1755 aaKnown RBP20.11■□□□□ 0.81
SSA3YBL075C TY1B-LR1Q12088 1755 aaKnown RBP20.11■□□□□ 0.81
SSA3YBL075C TY1B-NL1Q12112 1755 aa20.11■□□□□ 0.81
SSA3YBL075C TY1B-GR1Q12141 1755 aa20.11■□□□□ 0.81
SSA3YBL075C TY1B-BLQ12490 1755 aa20.11■□□□□ 0.81
SSA3YBL075C MYO4P32492 1471 aa20.1■□□□□ 0.81
SSA3YBL075C VTH1P40438 1549 aa20.06■□□□□ 0.8
SSA3YBL075C VTH2P40890 1549 aa20.06■□□□□ 0.8
SSA3YBL075C SAS10Q12136 610 aaPredicted RBP20.04■□□□□ 0.8
SSA3YBL075C TSC11P40061 1430 aa20■□□□□ 0.79
SSA3YBL075C TRM732Q03496 1420 aa19.99■□□□□ 0.79
SSA3YBL075C NTE1Q04958 1679 aa19.96■□□□□ 0.79
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms