RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeastyeast

Gene CCC1, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCC1YLR220W MON2P48563 1636 aaPredicted RBP29.42■■■□□ 2.3
CCC1YLR220W SGS1P35187 1447 aa29.34■■■□□ 2.29
CCC1YLR220W INO80P53115 1489 aa29.29■■■□□ 2.28
CCC1YLR220W TCB3Q03640 1545 aaKnown RBP28.99■■■□□ 2.23
CCC1YLR220W TY1B-DR4Q07793 1604 aa28.74■■■□□ 2.19
CCC1YLR220W SWR1Q05471 1514 aa28.46■■■□□ 2.15
CCC1YLR220W DNA2P38859 1522 aa27.97■■■□□ 2.07
CCC1YLR220W HSL1P34244 1518 aa27.97■■■□□ 2.07
CCC1YLR220W SPT6P23615 1451 aaKnown RBP27.89■■■□□ 2.06
CCC1YLR220W KOG1P38873 1557 aa27.73■■■□□ 2.03
CCC1YLR220W SPA2P23201 1466 aaKnown RBP27.61■■■□□ 2.01
CCC1YLR220W SSN2P38931 1420 aa27.58■■■□□ 2
CCC1YLR220W HIR3P47171 1648 aa27.42■■□□□ 1.98
CCC1YLR220W XRN1P22147 1528 aaKnown RBP27.07■■□□□ 1.92
CCC1YLR220W ECM5Q03214 1411 aa26.83■■□□□ 1.89
CCC1YLR220W THO2P53552 1597 aaKnown RBP26.82■■□□□ 1.88
CCC1YLR220W BUD4P47136 1447 aa26.78■■□□□ 1.88
CCC1YLR220W DRS1P32892 752 aaKnown RBP26.65■■□□□ 1.86
CCC1YLR220W REV3P14284 1504 aa26.65■■□□□ 1.86
CCC1YLR220W SIN3P22579 1536 aa26.47■■□□□ 1.83
CCC1YLR220W MDS3P53094 1487 aa26.37■■□□□ 1.81
CCC1YLR220W PEP1P32319 1579 aa26.33■■□□□ 1.81
CCC1YLR220W ATG2P53855 1592 aa26.33■■□□□ 1.81
CCC1YLR220W SSK2P53599 1579 aa26.24■■□□□ 1.79
CCC1YLR220W TAF2P23255 1407 aa26.22■■□□□ 1.79
CCC1YLR220W RSE1Q04693 1361 aaKnown RBP26.22■■□□□ 1.79
CCC1YLR220W ESP1Q03018 1630 aa26.04■■□□□ 1.76
CCC1YLR220W SKI3P17883 1432 aaKnown RBP26■■□□□ 1.75
CCC1YLR220W MYO2P19524 1574 aaKnown RBP25.8■■□□□ 1.72
CCC1YLR220W YPK9Q12697 1472 aa25.76■■□□□ 1.71
CCC1YLR220W BPT1P14772 1559 aa25.59■■□□□ 1.69
CCC1YLR220W SCC2Q04002 1493 aa25.59■■□□□ 1.69
CCC1YLR220W UFD4P33202 1483 aa25.51■■□□□ 1.67
CCC1YLR220W RPO31P04051 1460 aa25.49■■□□□ 1.67
CCC1YLR220W POL1P13382 1468 aa25.32■■□□□ 1.64
CCC1YLR220W MTC1P47018 478 aaKnown RBP25.3■■□□□ 1.64
CCC1YLR220W YCF1P39109 1515 aaKnown RBP25.26■■□□□ 1.63
CCC1YLR220W TOP2P06786 1428 aaKnown RBP25.2■■□□□ 1.63
CCC1YLR220W TY2B-LR1P0C2J3 1770 aa25.17■■□□□ 1.62
CCC1YLR220W TY2B-FP0CX63 1770 aa25.17■■□□□ 1.62
CCC1YLR220W TY2B-GR2P0CX64 1770 aa25.17■■□□□ 1.62
CCC1YLR220W TY2B-CP25384 1770 aa25.17■■□□□ 1.62
CCC1YLR220W TY2B-DR2Q03494 1770 aa25.17■■□□□ 1.62
CCC1YLR220W TY1B-DR1Q03855 1755 aa25.17■■□□□ 1.62
CCC1YLR220W TY2B-DR3Q07791 1770 aaKnown RBP25.17■■□□□ 1.62
CCC1YLR220W TY2B-OR1Q12113 1770 aa25.17■■□□□ 1.62
CCC1YLR220W TY2B-DR1Q12472 1770 aa25.17■■□□□ 1.62
CCC1YLR220W TY2B-OR2Q12501 1770 aa25.17■■□□□ 1.62
CCC1YLR220W RKR1Q04781 1562 aa25.13■■□□□ 1.61
CCC1YLR220W STU1P38198 1513 aa25.09■■□□□ 1.61
CCC1YLR220W YOR1P53049 1477 aa25.01■■□□□ 1.59
CCC1YLR220W CHD1P32657 1468 aa24.98■■□□□ 1.59
CCC1YLR220W SMC4Q12267 1418 aa24.95■■□□□ 1.59
CCC1YLR220W CDC25P04821 1589 aa24.94■■□□□ 1.58
CCC1YLR220W TY1B-BRQ12193 1756 aa24.93■■□□□ 1.58
CCC1YLR220W TY1B-GR3Q12316 1755 aa24.93■■□□□ 1.58
CCC1YLR220W TY1B-ORQ92393 1755 aa24.93■■□□□ 1.58
CCC1YLR220W TY1B-DR3Q99231 1755 aa24.93■■□□□ 1.58
CCC1YLR220W TY2B-BQ12491 1770 aa24.9■■□□□ 1.58
CCC1YLR220W TY1B-HO13535 1793 aa24.81■■□□□ 1.56
CCC1YLR220W TY1B-DR5P0C2I2 1755 aa24.81■■□□□ 1.56
CCC1YLR220W TY1B-DR6P0C2I3 1755 aa24.81■■□□□ 1.56
CCC1YLR220W TY1B-LR2P0C2I5 1755 aa24.81■■□□□ 1.56
CCC1YLR220W TY1B-LR3P0C2I6 1755 aaKnown RBP24.81■■□□□ 1.56
CCC1YLR220W TY1B-PR1P0C2I9 1755 aaKnown RBP24.81■■□□□ 1.56
CCC1YLR220W TY1B-PR2P0C2J0 1756 aa24.81■■□□□ 1.56
CCC1YLR220W TY1B-PR3P0C2J1 1755 aaKnown RBP24.81■■□□□ 1.56
CCC1YLR220W TY1B-JR1P47098 1755 aa24.81■■□□□ 1.56
CCC1YLR220W TY1B-ML2Q03434 1755 aaKnown RBP24.81■■□□□ 1.56
CCC1YLR220W TY1B-ER1Q03612 1755 aa24.81■■□□□ 1.56
CCC1YLR220W TY1B-ML1Q04711 1755 aaKnown RBP24.81■■□□□ 1.56
CCC1YLR220W TY1B-GR2Q12269 1755 aa24.81■■□□□ 1.56
CCC1YLR220W TY1B-OLQ12273 1755 aa24.81■■□□□ 1.56
CCC1YLR220W TY1B-PLQ12414 1755 aaKnown RBP24.81■■□□□ 1.56
CCC1YLR220W PAN1P32521 1480 aa24.8■■□□□ 1.56
CCC1YLR220W YTA7P40340 1379 aa24.8■■□□□ 1.56
CCC1YLR220W MMS22Q06164 1454 aa24.75■■□□□ 1.55
CCC1YLR220W RQC2Q12532 1038 aaKnown RBP24.71■■□□□ 1.55
CCC1YLR220W DNF1P32660 1571 aa24.69■■□□□ 1.54
CCC1YLR220W MYO4P32492 1471 aa24.64■■□□□ 1.53
CCC1YLR220W SPP41P38904 1435 aa24.62■■□□□ 1.53
CCC1YLR220W ESC1Q03661 1658 aaKnown RBP24.61■■□□□ 1.53
CCC1YLR220W RPA190P10964 1664 aaKnown RBP24.53■■□□□ 1.52
CCC1YLR220W TSC11P40061 1430 aa24.46■■□□□ 1.51
CCC1YLR220W MET5P47169 1442 aa24.46■■□□□ 1.51
CCC1YLR220W TRM732Q03496 1420 aa24.42■■□□□ 1.5
CCC1YLR220W VTH1P40438 1549 aa24.4■■□□□ 1.5
CCC1YLR220W VTH2P40890 1549 aa24.4■■□□□ 1.5
CCC1YLR220W TY1B-JR2P47100 1755 aaKnown RBP24.36■■□□□ 1.49
CCC1YLR220W TY1B-ER2Q03619 1755 aa24.36■■□□□ 1.49
CCC1YLR220W TY1B-MR1Q04214 1755 aa24.36■■□□□ 1.49
CCC1YLR220W TY1B-MR2Q04670 1755 aaKnown RBP24.36■■□□□ 1.49
CCC1YLR220W TY1B-LR1Q12088 1755 aaKnown RBP24.36■■□□□ 1.49
CCC1YLR220W TY1B-NL1Q12112 1755 aa24.36■■□□□ 1.49
CCC1YLR220W TY1B-GR1Q12141 1755 aa24.36■■□□□ 1.49
CCC1YLR220W TY1B-BLQ12490 1755 aa24.36■■□□□ 1.49
CCC1YLR220W SNQ2P32568 1501 aaKnown RBP24.23■■□□□ 1.47
CCC1YLR220W STH1P32597 1359 aa24.18■■□□□ 1.46
CCC1YLR220W SNT2P53127 1403 aa24.18■■□□□ 1.46
CCC1YLR220W NUP159P40477 1460 aa24.15■■□□□ 1.46
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms