RNA–Protein interactions for RNA: YHR087W

RTC3, Transcript of Protein of unknown function involved in RNA metabolism, yeastyeast

Gene RTC3, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTC3YHR087W MON2P48563 1636 aaPredicted RBP29.84■■■□□ 2.37
RTC3YHR087W INO80P53115 1489 aa29.73■■■□□ 2.35
RTC3YHR087W DNA2P38859 1522 aa28.36■■■□□ 2.13
RTC3YHR087W SWR1Q05471 1514 aa28.27■■■□□ 2.12
RTC3YHR087W TCB3Q03640 1545 aaKnown RBP27.97■■■□□ 2.07
RTC3YHR087W TY1B-DR4Q07793 1604 aa27.93■■■□□ 2.06
RTC3YHR087W KOG1P38873 1557 aa27.93■■■□□ 2.06
RTC3YHR087W RSE1Q04693 1361 aaKnown RBP27.39■■□□□ 1.98
RTC3YHR087W SGS1P35187 1447 aa27.33■■□□□ 1.96
RTC3YHR087W HSL1P34244 1518 aa26.88■■□□□ 1.89
RTC3YHR087W SPT6P23615 1451 aaKnown RBP26.85■■□□□ 1.89
RTC3YHR087W SPA2P23201 1466 aaKnown RBP26.55■■□□□ 1.84
RTC3YHR087W ECM5Q03214 1411 aa26.38■■□□□ 1.81
RTC3YHR087W HIR3P47171 1648 aa26.28■■□□□ 1.8
RTC3YHR087W THO2P53552 1597 aaKnown RBP26.18■■□□□ 1.78
RTC3YHR087W BUD4P47136 1447 aa26.16■■□□□ 1.78
RTC3YHR087W SSN2P38931 1420 aa25.96■■□□□ 1.75
RTC3YHR087W MDS3P53094 1487 aa25.92■■□□□ 1.74
RTC3YHR087W MTC1P47018 478 aaKnown RBP25.89■■□□□ 1.74
RTC3YHR087W XRN1P22147 1528 aaKnown RBP25.73■■□□□ 1.71
RTC3YHR087W PEP1P32319 1579 aa25.65■■□□□ 1.7
RTC3YHR087W REV3P14284 1504 aa25.52■■□□□ 1.68
RTC3YHR087W ATG2P53855 1592 aa25.44■■□□□ 1.66
RTC3YHR087W BPT1P14772 1559 aa25.27■■□□□ 1.64
RTC3YHR087W DRS1P32892 752 aaKnown RBP25.19■■□□□ 1.62
RTC3YHR087W SIN3P22579 1536 aa24.95■■□□□ 1.58
RTC3YHR087W SKI3P17883 1432 aaKnown RBP24.93■■□□□ 1.58
RTC3YHR087W SSK2P53599 1579 aa24.92■■□□□ 1.58
RTC3YHR087W TAF2P23255 1407 aa24.88■■□□□ 1.57
RTC3YHR087W YCF1P39109 1515 aaKnown RBP24.84■■□□□ 1.57
RTC3YHR087W ESP1Q03018 1630 aa24.61■■□□□ 1.53
RTC3YHR087W UFD4P33202 1483 aa24.53■■□□□ 1.52
RTC3YHR087W SCC2Q04002 1493 aa24.34■■□□□ 1.49
RTC3YHR087W YPK9Q12697 1472 aa24.33■■□□□ 1.49
RTC3YHR087W MYO2P19524 1574 aaKnown RBP24.22■■□□□ 1.47
RTC3YHR087W CDC25P04821 1589 aa24.2■■□□□ 1.47
RTC3YHR087W RPO31P04051 1460 aa24.19■■□□□ 1.46
RTC3YHR087W CHD1P32657 1468 aa24.19■■□□□ 1.46
RTC3YHR087W MET5P47169 1442 aa24.19■■□□□ 1.46
RTC3YHR087W DNF1P32660 1571 aa24.13■■□□□ 1.45
RTC3YHR087W ESC1Q03661 1658 aaKnown RBP24.09■■□□□ 1.45
RTC3YHR087W TY2B-LR1P0C2J3 1770 aa24.07■■□□□ 1.44
RTC3YHR087W TY2B-FP0CX63 1770 aa24.07■■□□□ 1.44
RTC3YHR087W TY2B-GR2P0CX64 1770 aa24.07■■□□□ 1.44
RTC3YHR087W TY2B-CP25384 1770 aa24.07■■□□□ 1.44
RTC3YHR087W TY2B-DR2Q03494 1770 aa24.07■■□□□ 1.44
RTC3YHR087W TY1B-DR1Q03855 1755 aa24.07■■□□□ 1.44
RTC3YHR087W TY2B-DR3Q07791 1770 aaKnown RBP24.07■■□□□ 1.44
RTC3YHR087W TY2B-OR1Q12113 1770 aa24.07■■□□□ 1.44
RTC3YHR087W TY2B-DR1Q12472 1770 aa24.07■■□□□ 1.44
RTC3YHR087W TY2B-OR2Q12501 1770 aa24.07■■□□□ 1.44
RTC3YHR087W TY1B-BRQ12193 1756 aa24.02■■□□□ 1.44
RTC3YHR087W TY1B-GR3Q12316 1755 aa24.02■■□□□ 1.44
RTC3YHR087W TY1B-ORQ92393 1755 aa24.02■■□□□ 1.44
RTC3YHR087W MIF2P35201 549 aa24.02■■□□□ 1.44
RTC3YHR087W LTE1P07866 1435 aa23.98■■□□□ 1.43
RTC3YHR087W PAN1P32521 1480 aa23.94■■□□□ 1.42
RTC3YHR087W RKR1Q04781 1562 aa23.93■■□□□ 1.42
RTC3YHR087W RQC2Q12532 1038 aaKnown RBP23.88■■□□□ 1.41
RTC3YHR087W RPA190P10964 1664 aaKnown RBP23.84■■□□□ 1.41
RTC3YHR087W BNI1P41832 1953 aa23.8■■□□□ 1.4
RTC3YHR087W TOP2P06786 1428 aaKnown RBP23.76■■□□□ 1.39
RTC3YHR087W TY2B-BQ12491 1770 aa23.75■■□□□ 1.39
RTC3YHR087W TY1B-HO13535 1793 aa23.75■■□□□ 1.39
RTC3YHR087W TY1B-DR5P0C2I2 1755 aa23.75■■□□□ 1.39
RTC3YHR087W TY1B-DR6P0C2I3 1755 aa23.75■■□□□ 1.39
RTC3YHR087W TY1B-LR2P0C2I5 1755 aa23.75■■□□□ 1.39
RTC3YHR087W TY1B-LR3P0C2I6 1755 aaKnown RBP23.75■■□□□ 1.39
RTC3YHR087W TY1B-PR1P0C2I9 1755 aaKnown RBP23.75■■□□□ 1.39
RTC3YHR087W TY1B-PR2P0C2J0 1756 aa23.75■■□□□ 1.39
RTC3YHR087W TY1B-PR3P0C2J1 1755 aaKnown RBP23.75■■□□□ 1.39
RTC3YHR087W TY1B-JR1P47098 1755 aa23.75■■□□□ 1.39
RTC3YHR087W TY1B-ML2Q03434 1755 aaKnown RBP23.75■■□□□ 1.39
RTC3YHR087W TY1B-ER1Q03612 1755 aa23.75■■□□□ 1.39
RTC3YHR087W TY1B-ML1Q04711 1755 aaKnown RBP23.75■■□□□ 1.39
RTC3YHR087W TY1B-GR2Q12269 1755 aa23.75■■□□□ 1.39
RTC3YHR087W TY1B-OLQ12273 1755 aa23.75■■□□□ 1.39
RTC3YHR087W TY1B-PLQ12414 1755 aaKnown RBP23.75■■□□□ 1.39
RTC3YHR087W TY1B-DR3Q99231 1755 aa23.66■■□□□ 1.38
RTC3YHR087W GEA2P39993 1459 aaKnown RBP23.65■■□□□ 1.38
RTC3YHR087W POL1P13382 1468 aa23.62■■□□□ 1.37
RTC3YHR087W MMS22Q06164 1454 aa23.62■■□□□ 1.37
RTC3YHR087W ITT1Q04638 464 aa23.57■■□□□ 1.36
RTC3YHR087W TRM732Q03496 1420 aa23.51■■□□□ 1.35
RTC3YHR087W STU1P38198 1513 aa23.43■■□□□ 1.34
RTC3YHR087W YRF1-1P0CX20 1796 aa23.4■■□□□ 1.34
RTC3YHR087W YRF1-5P0CX21 1796 aa23.4■■□□□ 1.34
RTC3YHR087W YRF1-8P0CX22 1796 aa23.4■■□□□ 1.34
RTC3YHR087W YTA7P40340 1379 aa23.37■■□□□ 1.33
RTC3YHR087W ABP1P15891 592 aaKnown RBP23.35■■□□□ 1.33
RTC3YHR087W MMS1Q06211 1407 aa23.33■■□□□ 1.33
RTC3YHR087W SMC4Q12267 1418 aa23.33■■□□□ 1.32
RTC3YHR087W NUP159P40477 1460 aa23.32■■□□□ 1.32
RTC3YHR087W SPP41P38904 1435 aa23.28■■□□□ 1.32
RTC3YHR087W VPS15P22219 1454 aa23.28■■□□□ 1.32
RTC3YHR087W YOR1P53049 1477 aa23.28■■□□□ 1.32
RTC3YHR087W TY1B-JR2P47100 1755 aaKnown RBP23.25■■□□□ 1.31
RTC3YHR087W TY1B-ER2Q03619 1755 aa23.25■■□□□ 1.31
RTC3YHR087W TY1B-MR1Q04214 1755 aa23.25■■□□□ 1.31
RTC3YHR087W TY1B-MR2Q04670 1755 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms