RNA–Protein interactions for RNA: RDN25-1

RDN25-1, Transcript of 25S ribosomal RNA (25S rRNA), yeastyeast

Gene RDN25-1, Length 3,396 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN25-1RDN25-1 SGS1P35187 1447 aa15.38■□□□□ 0.05
RDN25-1RDN25-1 SSN2P38931 1420 aa14.89□□□□□ -0.03
RDN25-1RDN25-1 SPA2P23201 1466 aaKnown RBP14.83□□□□□ -0.04
RDN25-1RDN25-1 BFR2Q06631 534 aaKnown RBP14.68□□□□□ -0.06
RDN25-1RDN25-1 DRS1P32892 752 aaKnown RBP14.66□□□□□ -0.06
RDN25-1RDN25-1 INO80P53115 1489 aa14.56□□□□□ -0.08
RDN25-1RDN25-1 RQC2Q12532 1038 aaKnown RBP14.5□□□□□ -0.09
RDN25-1RDN25-1 TCB3Q03640 1545 aaKnown RBP14.26□□□□□ -0.13
RDN25-1RDN25-1 HSL1P34244 1518 aa14.03□□□□□ -0.16
RDN25-1RDN25-1 SPT6P23615 1451 aaKnown RBP14.03□□□□□ -0.16
RDN25-1RDN25-1 TY1B-DR4Q07793 1604 aa14.01□□□□□ -0.17
RDN25-1RDN25-1 NOP2P40991 618 aaKnown RBP13.97□□□□□ -0.17
RDN25-1RDN25-1 XRN1P22147 1528 aaKnown RBP13.95□□□□□ -0.18
RDN25-1RDN25-1 TAF2P23255 1407 aa13.89□□□□□ -0.19
RDN25-1RDN25-1 HIR3P47171 1648 aa13.82□□□□□ -0.2
RDN25-1RDN25-1 RSE1Q04693 1361 aaKnown RBP13.78□□□□□ -0.2
RDN25-1RDN25-1 SAS10Q12136 610 aaPredicted RBP13.71□□□□□ -0.21
RDN25-1RDN25-1 MON2P48563 1636 aaPredicted RBP13.71□□□□□ -0.21
RDN25-1RDN25-1 SKI3P17883 1432 aaKnown RBP13.67□□□□□ -0.22
RDN25-1RDN25-1 REV3P14284 1504 aa13.65□□□□□ -0.22
RDN25-1RDN25-1 SWR1Q05471 1514 aa13.61□□□□□ -0.23
RDN25-1RDN25-1 MMS22Q06164 1454 aa13.6□□□□□ -0.23
RDN25-1RDN25-1 NSR1P27476 414 aaKnown RBP RIP-Chip data13.59□□□□□ -0.23not detected
RDN25-1RDN25-1 CAB3P36076 571 aa13.47□□□□□ -0.25
RDN25-1RDN25-1 THO2P53552 1597 aaKnown RBP13.46□□□□□ -0.25
RDN25-1RDN25-1 SSK2P53599 1579 aa13.43□□□□□ -0.26
RDN25-1RDN25-1 EBP2P36049 427 aaKnown RBP13.41□□□□□ -0.26
RDN25-1RDN25-1 STU1P38198 1513 aa13.41□□□□□ -0.26
RDN25-1RDN25-1 SIN3P22579 1536 aa13.36□□□□□ -0.27
RDN25-1RDN25-1 CHD1P32657 1468 aa13.35□□□□□ -0.27
RDN25-1RDN25-1 BPT1P14772 1559 aa13.33□□□□□ -0.28
RDN25-1RDN25-1 ESP1Q03018 1630 aa13.31□□□□□ -0.28
RDN25-1RDN25-1 MYO2P19524 1574 aaKnown RBP13.25□□□□□ -0.29
RDN25-1RDN25-1 YTA7P40340 1379 aa13.24□□□□□ -0.29
RDN25-1RDN25-1 TRM732Q03496 1420 aa13.24□□□□□ -0.29
RDN25-1RDN25-1 POL1P13382 1468 aa13.24□□□□□ -0.29
RDN25-1RDN25-1 ECM5Q03214 1411 aa13.22□□□□□ -0.29
RDN25-1RDN25-1 IFH1P39520 1085 aa13.19□□□□□ -0.3
RDN25-1RDN25-1 SCC2Q04002 1493 aa13.19□□□□□ -0.3
RDN25-1RDN25-1 BUD4P47136 1447 aa13.16□□□□□ -0.3
RDN25-1RDN25-1 YPR148CQ06523 435 aa13.15□□□□□ -0.3
RDN25-1RDN25-1 UFD4P33202 1483 aa13.15□□□□□ -0.3
RDN25-1RDN25-1 IKI3Q06706 1349 aaKnown RBP13.13□□□□□ -0.31
RDN25-1RDN25-1 DNA2P38859 1522 aa13.13□□□□□ -0.31
RDN25-1RDN25-1 SSM4P40318 1319 aa13.1□□□□□ -0.31
RDN25-1RDN25-1 STH1P32597 1359 aa13.09□□□□□ -0.31
RDN25-1RDN25-1 YPK9Q12697 1472 aa13.09□□□□□ -0.31
RDN25-1RDN25-1 ATG2P53855 1592 aa13.08□□□□□ -0.32
RDN25-1RDN25-1 RKR1Q04781 1562 aa13.07□□□□□ -0.32
RDN25-1RDN25-1 KOG1P38873 1557 aa13.03□□□□□ -0.32
RDN25-1RDN25-1 SIS2P36024 562 aa13.01□□□□□ -0.33
RDN25-1RDN25-1 YOR1P53049 1477 aa13.01□□□□□ -0.33
RDN25-1RDN25-1 URN1Q06525 465 aaKnown RBP12.98□□□□□ -0.33
RDN25-1RDN25-1 AVT3P36062 692 aa12.97□□□□□ -0.33
RDN25-1RDN25-1 RTT106P40161 455 aa12.97□□□□□ -0.33
RDN25-1RDN25-1 TAF7Q05021 590 aa12.96□□□□□ -0.33
RDN25-1RDN25-1 SNQ2P32568 1501 aaKnown RBP12.92□□□□□ -0.34
RDN25-1RDN25-1 MYO4P32492 1471 aa12.91□□□□□ -0.34
RDN25-1RDN25-1 TOP2P06786 1428 aaKnown RBP12.89□□□□□ -0.35
RDN25-1RDN25-1 POL5P39985 1022 aaKnown RBP12.88□□□□□ -0.35
RDN25-1RDN25-1 RPO31P04051 1460 aa12.86□□□□□ -0.35
RDN25-1RDN25-1 MDS3P53094 1487 aa12.86□□□□□ -0.35
RDN25-1RDN25-1 SPP41P38904 1435 aa12.85□□□□□ -0.35
RDN25-1RDN25-1 GEA1P47102 1408 aaPredicted RBP12.84□□□□□ -0.35
RDN25-1RDN25-1 PEP1P32319 1579 aa12.84□□□□□ -0.35
RDN25-1RDN25-1 SMC4Q12267 1418 aa12.84□□□□□ -0.35
RDN25-1RDN25-1 PDR15Q04182 1529 aaKnown RBP12.81□□□□□ -0.36
RDN25-1RDN25-1 PAN1P32521 1480 aa12.8□□□□□ -0.36
RDN25-1RDN25-1 LEU3P08638 886 aa12.8□□□□□ -0.36
RDN25-1RDN25-1 YCF1P39109 1515 aaKnown RBP12.79□□□□□ -0.36
RDN25-1RDN25-1 SPT7P35177 1332 aa12.79□□□□□ -0.36
RDN25-1RDN25-1 TSC11P40061 1430 aa12.77□□□□□ -0.36
RDN25-1RDN25-1 MLP2P40457 1679 aa12.74□□□□□ -0.37
RDN25-1RDN25-1 ENP1P38333 483 aaKnown RBP12.72□□□□□ -0.37
RDN25-1RDN25-1 ORC1P54784 914 aaPredicted RBP12.7□□□□□ -0.38
RDN25-1RDN25-1 TY2B-LR1P0C2J3 1770 aa12.7□□□□□ -0.38
RDN25-1RDN25-1 TY2B-FP0CX63 1770 aa12.7□□□□□ -0.38
RDN25-1RDN25-1 TY2B-GR2P0CX64 1770 aa12.7□□□□□ -0.38
RDN25-1RDN25-1 TY2B-CP25384 1770 aa12.7□□□□□ -0.38
RDN25-1RDN25-1 TY2B-DR2Q03494 1770 aa12.7□□□□□ -0.38
RDN25-1RDN25-1 TY1B-DR1Q03855 1755 aa12.7□□□□□ -0.38
RDN25-1RDN25-1 TY2B-DR3Q07791 1770 aaKnown RBP12.7□□□□□ -0.38
RDN25-1RDN25-1 TY2B-OR1Q12113 1770 aa12.7□□□□□ -0.38
RDN25-1RDN25-1 TY2B-DR1Q12472 1770 aa12.7□□□□□ -0.38
RDN25-1RDN25-1 TY2B-OR2Q12501 1770 aa12.7□□□□□ -0.38
RDN25-1RDN25-1 TY1B-DR3Q99231 1755 aa12.69□□□□□ -0.38
RDN25-1RDN25-1 NUP170P38181 1502 aa12.67□□□□□ -0.38
RDN25-1RDN25-1 ULS1Q08562 1619 aa12.61□□□□□ -0.39
RDN25-1RDN25-1 YFR016CP43597 1233 aaKnown RBP12.61□□□□□ -0.39
RDN25-1RDN25-1 TY2B-BQ12491 1770 aa12.6□□□□□ -0.39
RDN25-1RDN25-1 VPS15P22219 1454 aa12.59□□□□□ -0.39
RDN25-1RDN25-1 TY3B-GQ99315 1547 aa12.58□□□□□ -0.4
RDN25-1RDN25-1 CKB1P43639 278 aa12.57□□□□□ -0.4
RDN25-1RDN25-1 LEO1P38439 464 aa12.53□□□□□ -0.4
RDN25-1RDN25-1 PSD2P53037 1138 aaKnown RBP12.51□□□□□ -0.41
RDN25-1RDN25-1 VTH1P40438 1549 aa12.5□□□□□ -0.41
RDN25-1RDN25-1 VTH2P40890 1549 aa12.5□□□□□ -0.41
RDN25-1RDN25-1 PDR10P51533 1564 aa12.48□□□□□ -0.41
RDN25-1RDN25-1 AIM44Q99299 758 aa12.47□□□□□ -0.41
RDN25-1RDN25-1 SEC3P33332 1336 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms