RNA–Protein interactions for RNA: YKL029C

MAE1, Transcript of Mitochondrial malic enzyme, yeast

Gene MAE1, Length 2,010 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MAE1	YKL029C	BFR2	Q06631	534 aa	Known RBP	13.98	□□□□□ -0.17
MAE1	YKL029C	RQC2	Q12532	1038 aa	Known RBP	13.6	□□□□□ -0.23
MAE1	YKL029C	NOP2	P40991	618 aa	Known RBP	13.37	□□□□□ -0.27
MAE1	YKL029C	SPA2	P23201	1466 aa	Known RBP	12.96	□□□□□ -0.33
MAE1	YKL029C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	12.92	□□□□□ -0.34	not detected
MAE1	YKL029C	CAB3	P36076	571 aa		12.84	□□□□□ -0.35
MAE1	YKL029C	EBP2	P36049	427 aa	Known RBP	12.83	□□□□□ -0.36
MAE1	YKL029C	SKI3	P17883	1432 aa	Known RBP	12.83	□□□□□ -0.36
MAE1	YKL029C	SSN2	P38931	1420 aa		12.66	□□□□□ -0.38
MAE1	YKL029C	SGS1	P35187	1447 aa		12.6	□□□□□ -0.39
MAE1	YKL029C	URN1	Q06525	465 aa	Known RBP	12.43	□□□□□ -0.42
MAE1	YKL029C	SIS2	P36024	562 aa		12.42	□□□□□ -0.42
MAE1	YKL029C	YPR148C	Q06523	435 aa		12.38	□□□□□ -0.43
MAE1	YKL029C	DRS1	P32892	752 aa	Known RBP	12.35	□□□□□ -0.43
MAE1	YKL029C	ENP1	P38333	483 aa	Known RBP	12.18	□□□□□ -0.46
MAE1	YKL029C	TCB3	Q03640	1545 aa	Known RBP	12.13	□□□□□ -0.47
MAE1	YKL029C	TAF7	Q05021	590 aa		12.06	□□□□□ -0.48
MAE1	YKL029C	MMS22	Q06164	1454 aa		11.98	□□□□□ -0.49
MAE1	YKL029C	CHD1	P32657	1468 aa		11.96	□□□□□ -0.49
MAE1	YKL029C	AVT3	P36062	692 aa		11.94	□□□□□ -0.5
MAE1	YKL029C	TCB2	P48231	1178 aa		11.94	□□□□□ -0.5
MAE1	YKL029C	INO80	P53115	1489 aa		11.91	□□□□□ -0.5
MAE1	YKL029C	STH1	P32597	1359 aa		11.89	□□□□□ -0.51
MAE1	YKL029C	UFD4	P33202	1483 aa		11.89	□□□□□ -0.51
MAE1	YKL029C	MNN4	P36044	1178 aa		11.88	□□□□□ -0.51
MAE1	YKL029C	YFR016C	P43597	1233 aa	Known RBP	11.87	□□□□□ -0.51
MAE1	YKL029C	TFA1	P36100	482 aa		11.83	□□□□□ -0.52
MAE1	YKL029C	RSE1	Q04693	1361 aa	Known RBP	11.82	□□□□□ -0.52
MAE1	YKL029C	POL5	P39985	1022 aa	Known RBP	11.79	□□□□□ -0.52
MAE1	YKL029C	CLC1	P17891	233 aa		11.79	□□□□□ -0.52
MAE1	YKL029C	SPP41	P38904	1435 aa		11.77	□□□□□ -0.53
MAE1	YKL029C	SPT7	P35177	1332 aa		11.77	□□□□□ -0.53
MAE1	YKL029C	RPS0B	P46654	252 aa	Known RBP	11.74	□□□□□ -0.53
MAE1	YKL029C	XRN1	P22147	1528 aa	Known RBP	11.74	□□□□□ -0.53
MAE1	YKL029C	PRS1	P32895	427 aa	Known RBP	11.73	□□□□□ -0.53
MAE1	YKL029C	SEC3	P33332	1336 aa	Known RBP	11.72	□□□□□ -0.53
MAE1	YKL029C	LEO1	P38439	464 aa		11.72	□□□□□ -0.53
MAE1	YKL029C	IME2	P32581	645 aa		11.7	□□□□□ -0.54
MAE1	YKL029C	AIM44	Q99299	758 aa		11.65	□□□□□ -0.54
MAE1	YKL029C	ECM5	Q03214	1411 aa		11.64	□□□□□ -0.55
MAE1	YKL029C	TRM732	Q03496	1420 aa		11.64	□□□□□ -0.55
MAE1	YKL029C	IKI3	Q06706	1349 aa	Known RBP	11.63	□□□□□ -0.55
MAE1	YKL029C	MON2	P48563	1636 aa	Predicted RBP	11.62	□□□□□ -0.55
MAE1	YKL029C	QCR6	P00127	147 aa		11.61	□□□□□ -0.55
MAE1	YKL029C	CWC22	P53333	577 aa	Known RBP	11.59	□□□□□ -0.55
MAE1	YKL029C	EAF7	P53911	425 aa	Known RBP	11.54	□□□□□ -0.56
MAE1	YKL029C	OPY1	P38271	328 aa		11.52	□□□□□ -0.57
MAE1	YKL029C	FPR3	P38911	411 aa	Known RBP	11.52	□□□□□ -0.57
MAE1	YKL029C	RLF2	Q12495	606 aa		11.49	□□□□□ -0.57
MAE1	YKL029C	CFT1	Q06632	1357 aa	Known RBP	11.47	□□□□□ -0.57
MAE1	YKL029C	YGR130C	P53278	816 aa		11.47	□□□□□ -0.57
MAE1	YKL029C	NOP53	Q12080	455 aa	Known RBP	11.45	□□□□□ -0.58
MAE1	YKL029C	SAS10	Q12136	610 aa	Predicted RBP	11.42	□□□□□ -0.58
MAE1	YKL029C	RPC31	P17890	251 aa		11.42	□□□□□ -0.58
MAE1	YKL029C	SSM4	P40318	1319 aa		11.41	□□□□□ -0.58
MAE1	YKL029C	BUD4	P47136	1447 aa		11.4	□□□□□ -0.58
MAE1	YKL029C	SNF7	P39929	240 aa	Known RBP	11.39	□□□□□ -0.59
MAE1	YKL029C	NUG1	P40010	520 aa	Known RBP	11.39	□□□□□ -0.59
MAE1	YKL029C	PEP1	P32319	1579 aa		11.39	□□□□□ -0.59
MAE1	YKL029C	MTC1	P47018	478 aa	Known RBP	11.38	□□□□□ -0.59
MAE1	YKL029C	DIP2	Q12220	943 aa	Predicted RBP	11.38	□□□□□ -0.59
MAE1	YKL029C	ENV11	P53246	860 aa		11.38	□□□□□ -0.59
MAE1	YKL029C	RTT106	P40161	455 aa		11.37	□□□□□ -0.59
MAE1	YKL029C	SRB8	P25648	1427 aa		11.37	□□□□□ -0.59
MAE1	YKL029C	KRI1	P42846	591 aa	Known RBP	11.36	□□□□□ -0.59
MAE1	YKL029C	LEU3	P08638	886 aa		11.35	□□□□□ -0.59
MAE1	YKL029C	MYO2	P19524	1574 aa	Known RBP	11.35	□□□□□ -0.59
MAE1	YKL029C	SPT21	P35209	758 aa		11.34	□□□□□ -0.59
MAE1	YKL029C	TOP2	P06786	1428 aa	Known RBP	11.33	□□□□□ -0.59
MAE1	YKL029C	DEF1	P35732	738 aa	Known RBP	11.33	□□□□□ -0.6
MAE1	YKL029C	PDR10	P51533	1564 aa		11.33	□□□□□ -0.6
MAE1	YKL029C	RNA1	P11745	407 aa	Known RBP	11.31	□□□□□ -0.6
MAE1	YKL029C	PAF1	P38351	445 aa		11.31	□□□□□ -0.6
MAE1	YKL029C	NUP170	P38181	1502 aa		11.31	□□□□□ -0.6
MAE1	YKL029C	YLR419W	Q06698	1435 aa	Known RBP	11.28	□□□□□ -0.6
MAE1	YKL029C	FPR4	Q06205	392 aa	Predicted RBP	11.28	□□□□□ -0.6
MAE1	YKL029C	RIX1	P38883	763 aa	Predicted RBP	11.27	□□□□□ -0.61
MAE1	YKL029C	YRB30	P53107	440 aa	Predicted RBP	11.27	□□□□□ -0.61
MAE1	YKL029C	STU1	P38198	1513 aa		11.25	□□□□□ -0.61
MAE1	YKL029C	ROX1	P25042	368 aa		11.25	□□□□□ -0.61
MAE1	YKL029C	YTA7	P40340	1379 aa		11.24	□□□□□ -0.61
MAE1	YKL029C	PSD2	P53037	1138 aa	Known RBP	11.21	□□□□□ -0.61
MAE1	YKL029C	MMS1	Q06211	1407 aa		11.2	□□□□□ -0.62
MAE1	YKL029C	NOP58	Q12499	511 aa	Known RBP	11.19	□□□□□ -0.62
MAE1	YKL029C	NAP1	P25293	417 aa	Known RBP	11.18	□□□□□ -0.62
MAE1	YKL029C	THO2	P53552	1597 aa	Known RBP	11.17	□□□□□ -0.62
MAE1	YKL029C	SLN1	P39928	1220 aa	Predicted RBP	11.16	□□□□□ -0.62
MAE1	YKL029C	SMC4	Q12267	1418 aa		11.16	□□□□□ -0.62
MAE1	YKL029C	FUN12	P39730	1002 aa	Known RBP	11.16	□□□□□ -0.62
MAE1	YKL029C	CTR9	P89105	1077 aa		11.16	□□□□□ -0.62
MAE1	YKL029C	YIR014W	P40570	242 aa		11.15	□□□□□ -0.62
MAE1	YKL029C	PAN1	P32521	1480 aa		11.14	□□□□□ -0.63
MAE1	YKL029C	SCC2	Q04002	1493 aa		11.14	□□□□□ -0.63
MAE1	YKL029C	MLP2	P40457	1679 aa		11.14	□□□□□ -0.63
MAE1	YKL029C	SPC110	P32380	944 aa		11.14	□□□□□ -0.63
MAE1	YKL029C	SPT2	P06843	333 aa	Predicted RBP	11.12	□□□□□ -0.63
MAE1	YKL029C	SPT6	P23615	1451 aa	Known RBP	11.12	□□□□□ -0.63
MAE1	YKL029C	MYO4	P32492	1471 aa		11.1	□□□□□ -0.63
MAE1	YKL029C	YPK9	Q12697	1472 aa		11.09	□□□□□ -0.63
MAE1	YKL029C	NMD2	P38798	1089 aa	Known RBP	11.09	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms