RNA–Protein interactions for RNA: YGL045W

RIM8, Transcript of Protein involved in proteolytic activation of Rim101p, yeastyeast

Gene RIM8, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM8YGL045W SPA2P23201 1466 aaKnown RBP13.95□□□□□ -0.18
RIM8YGL045W BFR2Q06631 534 aaKnown RBP13.79□□□□□ -0.2
RIM8YGL045W SGS1P35187 1447 aa13.74□□□□□ -0.21
RIM8YGL045W SSN2P38931 1420 aa13.66□□□□□ -0.22
RIM8YGL045W NOP2P40991 618 aaKnown RBP13.59□□□□□ -0.23
RIM8YGL045W SKI3P17883 1432 aaKnown RBP13.56□□□□□ -0.24
RIM8YGL045W NSR1P27476 414 aaKnown RBP RIP-Chip data13.3□□□□□ -0.28not detected
RIM8YGL045W DRS1P32892 752 aaKnown RBP13.28□□□□□ -0.28
RIM8YGL045W INO80P53115 1489 aa13.12□□□□□ -0.31
RIM8YGL045W RQC2Q12532 1038 aaKnown RBP12.94□□□□□ -0.34
RIM8YGL045W CHD1P32657 1468 aa12.85□□□□□ -0.35
RIM8YGL045W CAB3P36076 571 aa12.83□□□□□ -0.36
RIM8YGL045W EBP2P36049 427 aaKnown RBP12.8□□□□□ -0.36
RIM8YGL045W MMS22Q06164 1454 aa12.76□□□□□ -0.37
RIM8YGL045W ENP1P38333 483 aaKnown RBP12.67□□□□□ -0.38
RIM8YGL045W TCB3Q03640 1545 aaKnown RBP12.61□□□□□ -0.39
RIM8YGL045W UFD4P33202 1483 aa12.59□□□□□ -0.39
RIM8YGL045W XRN1P22147 1528 aaKnown RBP12.57□□□□□ -0.4
RIM8YGL045W YPR148CQ06523 435 aa12.48□□□□□ -0.41
RIM8YGL045W SPP41P38904 1435 aa12.47□□□□□ -0.41
RIM8YGL045W STH1P32597 1359 aa12.43□□□□□ -0.42
RIM8YGL045W IKI3Q06706 1349 aaKnown RBP12.4□□□□□ -0.42
RIM8YGL045W RSE1Q04693 1361 aaKnown RBP12.4□□□□□ -0.42
RIM8YGL045W TRM732Q03496 1420 aa12.38□□□□□ -0.43
RIM8YGL045W POL5P39985 1022 aaKnown RBP12.34□□□□□ -0.43
RIM8YGL045W TFA1P36100 482 aa12.3□□□□□ -0.44
RIM8YGL045W SEC3P33332 1336 aaKnown RBP12.3□□□□□ -0.44
RIM8YGL045W SIS2P36024 562 aa12.25□□□□□ -0.45
RIM8YGL045W ECM5Q03214 1411 aa12.24□□□□□ -0.45
RIM8YGL045W SPT7P35177 1332 aa12.24□□□□□ -0.45
RIM8YGL045W MON2P48563 1636 aaPredicted RBP12.24□□□□□ -0.45
RIM8YGL045W PRS1P32895 427 aaKnown RBP12.23□□□□□ -0.45
RIM8YGL045W MTC1P47018 478 aaKnown RBP12.19□□□□□ -0.46
RIM8YGL045W HSL1P34244 1518 aa12.18□□□□□ -0.46
RIM8YGL045W YTA7P40340 1379 aa12.17□□□□□ -0.46
RIM8YGL045W STU1P38198 1513 aa12.15□□□□□ -0.46
RIM8YGL045W SAS10Q12136 610 aaPredicted RBP12.15□□□□□ -0.47
RIM8YGL045W SSM4P40318 1319 aa12.14□□□□□ -0.47
RIM8YGL045W NUP170P38181 1502 aa12.14□□□□□ -0.47
RIM8YGL045W TY1B-DR4Q07793 1604 aa12.13□□□□□ -0.47
RIM8YGL045W SPT6P23615 1451 aaKnown RBP12.11□□□□□ -0.47
RIM8YGL045W TCB2P48231 1178 aa12.11□□□□□ -0.47
RIM8YGL045W URN1Q06525 465 aaKnown RBP12.1□□□□□ -0.47
RIM8YGL045W MYO2P19524 1574 aaKnown RBP12.08□□□□□ -0.48
RIM8YGL045W CLC1P17891 233 aa12.05□□□□□ -0.48
RIM8YGL045W IME2P32581 645 aa12.05□□□□□ -0.48
RIM8YGL045W SIN3P22579 1536 aa12.04□□□□□ -0.48
RIM8YGL045W THO2P53552 1597 aaKnown RBP12.04□□□□□ -0.48
RIM8YGL045W HIR3P47171 1648 aa12.03□□□□□ -0.48
RIM8YGL045W POL1P13382 1468 aa12.03□□□□□ -0.48
RIM8YGL045W REV3P14284 1504 aa12.02□□□□□ -0.48
RIM8YGL045W TAF7Q05021 590 aa12.02□□□□□ -0.49
RIM8YGL045W SSK2P53599 1579 aa11.99□□□□□ -0.49
RIM8YGL045W SCC2Q04002 1493 aa11.96□□□□□ -0.49
RIM8YGL045W PEP1P32319 1579 aa11.95□□□□□ -0.5
RIM8YGL045W MNN4P36044 1178 aa11.95□□□□□ -0.5
RIM8YGL045W RTT106P40161 455 aa11.95□□□□□ -0.5
RIM8YGL045W TAF2P23255 1407 aa11.95□□□□□ -0.5
RIM8YGL045W BUD4P47136 1447 aa11.95□□□□□ -0.5
RIM8YGL045W SRB8P25648 1427 aa11.92□□□□□ -0.5
RIM8YGL045W BPT1P14772 1559 aa11.9□□□□□ -0.5
RIM8YGL045W OPY1P38271 328 aa11.9□□□□□ -0.5
RIM8YGL045W YLR419WQ06698 1435 aaKnown RBP11.88□□□□□ -0.51
RIM8YGL045W SMC4Q12267 1418 aa11.88□□□□□ -0.51
RIM8YGL045W PDR10P51533 1564 aa11.86□□□□□ -0.51
RIM8YGL045W CFT1Q06632 1357 aaKnown RBP11.86□□□□□ -0.51
RIM8YGL045W PAN1P32521 1480 aa11.85□□□□□ -0.51
RIM8YGL045W MYO4P32492 1471 aa11.84□□□□□ -0.51
RIM8YGL045W YFR016CP43597 1233 aaKnown RBP11.81□□□□□ -0.52
RIM8YGL045W EAF7P53911 425 aaKnown RBP11.8□□□□□ -0.52
RIM8YGL045W DNA2P38859 1522 aa11.79□□□□□ -0.52
RIM8YGL045W RPC31P17890 251 aa11.78□□□□□ -0.52
RIM8YGL045W ESP1Q03018 1630 aa11.77□□□□□ -0.53
RIM8YGL045W MLP2P40457 1679 aa11.77□□□□□ -0.53
RIM8YGL045W TOP2P06786 1428 aaKnown RBP11.75□□□□□ -0.53
RIM8YGL045W TSC11P40061 1430 aa11.74□□□□□ -0.53
RIM8YGL045W PSD2P53037 1138 aaKnown RBP11.74□□□□□ -0.53
RIM8YGL045W LEU3P08638 886 aa11.73□□□□□ -0.53
RIM8YGL045W SNF7P39929 240 aaKnown RBP11.73□□□□□ -0.53
RIM8YGL045W YOR1P53049 1477 aa11.73□□□□□ -0.53
RIM8YGL045W LEO1P38439 464 aa11.72□□□□□ -0.53
RIM8YGL045W QCR6P00127 147 aa11.71□□□□□ -0.53
RIM8YGL045W SNQ2P32568 1501 aaKnown RBP11.71□□□□□ -0.53
RIM8YGL045W SWR1Q05471 1514 aa11.71□□□□□ -0.53
RIM8YGL045W GEA1P47102 1408 aaPredicted RBP11.67□□□□□ -0.54
RIM8YGL045W YPK9Q12697 1472 aa11.67□□□□□ -0.54
RIM8YGL045W AVT3P36062 692 aa11.66□□□□□ -0.54
RIM8YGL045W MHP1P43638 1398 aa11.65□□□□□ -0.54
RIM8YGL045W YCF1P39109 1515 aaKnown RBP11.64□□□□□ -0.55
RIM8YGL045W YIR014WP40570 242 aa11.64□□□□□ -0.55
RIM8YGL045W IRC20Q06554 1556 aa11.61□□□□□ -0.55
RIM8YGL045W ROX1P25042 368 aa11.6□□□□□ -0.55
RIM8YGL045W RLF2Q12495 606 aa11.6□□□□□ -0.55
RIM8YGL045W ABP1P15891 592 aaKnown RBP11.59□□□□□ -0.55
RIM8YGL045W RKR1Q04781 1562 aa11.59□□□□□ -0.55
RIM8YGL045W FPR3P38911 411 aaKnown RBP11.58□□□□□ -0.56
RIM8YGL045W IFH1P39520 1085 aa11.58□□□□□ -0.56
RIM8YGL045W AIM44Q99299 758 aa11.57□□□□□ -0.56
RIM8YGL045W KOG1P38873 1557 aa11.57□□□□□ -0.56
RIM8YGL045W NUP159P40477 1460 aa11.56□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms